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The map label for this gene is ycbC [H]

Identifier: 238920331

GI number: 238920331

Start: 2332798

End: 2333628

Strand: Direct

Name: ycbC [H]

Synonym: NT01EI_2441

Alternate gene names: 238920331

Gene position: 2332798-2333628 (Clockwise)

Preceding gene: 238920323

Following gene: 238920332

Centisome position: 61.19

GC content: 63.66

Gene sequence:

>831_bases
ATGACGTTTTTTCATCCAAAAGAGACGGTTGTCATGCTATTTGAGCTCAAAAAATTTGTCGGTATGCTGCTATTACCGCT
GCCGCTGCTCCTGTCGATCTGCGCTCTCGGCCTGGCGCTGCTCTGGTTCACTCGCCGTCAGCGCATAGGAAAAGTCCTCG
TTTCGCTCGCTTGGCTGGGTATTCTCCTGCTGAGCATGCAACCGCTGGCCGATCGCCTGCTTGCCCCACTGGAGAATCGT
TACCCTACCCTGAACGGCCCGCATCAGGCCCGCTATGTGGTGGTTCTCGGCGGCGGCTACACCTATAACCCGCAGTGGGC
GCCCAGCTCCAACCTGATCGGCAACAGCCTGCCGCGGGTGACCGAGGGCATTCGCCAGCTCGCCCTGAACCCGCAGGCGC
AGCTTATCTTTACCGGCGCAGCGGCGCAGGGGAACCCGCTCAGCAGCGCCGAGGTCGCGGCGCAGGTGGCGCGTTCGCTG
GGCGTCGATGAACAGCGTATTATCGTTTTGGACAGTCCCCGGGATACCGGCCAGGAGGCGCGGGCCGTCGCAGGCGTCGT
CGGTAACGCGCCGCTGATTCTGGTCACCTCGGCCAACCATATGCCGCGGGCGCTGGGCTTTTTCCATCATCAGGGGCTCG
ATCCGATTCCAGCACCGGCCAACCAGCTGGCGATCGCCAGCCCGCTCAATCCCTGGGAGCGCTGGCTCCCCTCTCCGCTC
TACCTGGGGCACAGCGAACGCGCCGGGTATGAAACCCTGGGGCGCCTCTGGCAAGCTCTCACCGGACAGGGTCAGGATCG
GCGCACGGCGGCACCGACGGAGGAGAAATGA

Upstream 100 bases:

>100_bases
AGCCGCGCGGTCAGCCGCCGCACGAGGTCCAAAGGATCAAAGGTACATTTTGACACAGGCTATCGTAGAATGAATATTAT
CAGCCTGATATTCGACGCGA

Downstream 100 bases:

>100_bases
ACCTACGGATCTTAACGCGGCGGCGCGCCCGCCTCTACAGCCTGGCCATCGCACTGTTAACCTTTGAGGGACAGGTGCTG
CTGTTCGACGCGCTCGCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MTFFHPKETVVMLFELKKFVGMLLLPLPLLLSICALGLALLWFTRRQRIGKVLVSLAWLGILLLSMQPLADRLLAPLENR
YPTLNGPHQARYVVVLGGGYTYNPQWAPSSNLIGNSLPRVTEGIRQLALNPQAQLIFTGAAAQGNPLSSAEVAAQVARSL
GVDEQRIIVLDSPRDTGQEARAVAGVVGNAPLILVTSANHMPRALGFFHHQGLDPIPAPANQLAIASPLNPWERWLPSPL
YLGHSERAGYETLGRLWQALTGQGQDRRTAAPTEEK

Sequences:

>Translated_276_residues
MTFFHPKETVVMLFELKKFVGMLLLPLPLLLSICALGLALLWFTRRQRIGKVLVSLAWLGILLLSMQPLADRLLAPLENR
YPTLNGPHQARYVVVLGGGYTYNPQWAPSSNLIGNSLPRVTEGIRQLALNPQAQLIFTGAAAQGNPLSSAEVAAQVARSL
GVDEQRIIVLDSPRDTGQEARAVAGVVGNAPLILVTSANHMPRALGFFHHQGLDPIPAPANQLAIASPLNPWERWLPSPL
YLGHSERAGYETLGRLWQALTGQGQDRRTAAPTEEK
>Mature_275_residues
TFFHPKETVVMLFELKKFVGMLLLPLPLLLSICALGLALLWFTRRQRIGKVLVSLAWLGILLLSMQPLADRLLAPLENRY
PTLNGPHQARYVVVLGGGYTYNPQWAPSSNLIGNSLPRVTEGIRQLALNPQAQLIFTGAAAQGNPLSSAEVAAQVARSLG
VDEQRIIVLDSPRDTGQEARAVAGVVGNAPLILVTSANHMPRALGFFHHQGLDPIPAPANQLAIASPLNPWERWLPSPLY
LGHSERAGYETLGRLWQALTGQGQDRRTAAPTEEK

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=257, Percent_Identity=61.8677042801556, Blast_Score=301, Evalue=4e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 30105; Mature: 29974

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFFHPKETVVMLFELKKFVGMLLLPLPLLLSICALGLALLWFTRRQRIGKVLVSLAWLG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLLSMQPLADRLLAPLENRYPTLNGPHQARYVVVLGGGYTYNPQWAPSSNLIGNSLPRV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCHHH
TEGIRQLALNPQAQLIFTGAAAQGNPLSSAEVAAQVARSLGVDEQRIIVLDSPRDTGQEA
HHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHH
RAVAGVVGNAPLILVTSANHMPRALGFFHHQGLDPIPAPANQLAIASPLNPWERWLPSPL
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHCCCCE
YLGHSERAGYETLGRLWQALTGQGQDRRTAAPTEEK
ECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TFFHPKETVVMLFELKKFVGMLLLPLPLLLSICALGLALLWFTRRQRIGKVLVSLAWLG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILLLSMQPLADRLLAPLENRYPTLNGPHQARYVVVLGGGYTYNPQWAPSSNLIGNSLPRV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCHHH
TEGIRQLALNPQAQLIFTGAAAQGNPLSSAEVAAQVARSLGVDEQRIIVLDSPRDTGQEA
HHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHH
RAVAGVVGNAPLILVTSANHMPRALGFFHHQGLDPIPAPANQLAIASPLNPWERWLPSPL
HHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHCCCCE
YLGHSERAGYETLGRLWQALTGQGQDRRTAAPTEEK
ECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]