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The map label for this gene is ycbK [H]

Identifier: 238920325

GI number: 238920325

Start: 2322526

End: 2323074

Strand: Reverse

Name: ycbK [H]

Synonym: NT01EI_2435

Alternate gene names: 238920325

Gene position: 2323074-2322526 (Counterclockwise)

Preceding gene: 238920326

Following gene: 238920324

Centisome position: 60.94

GC content: 57.38

Gene sequence:

>549_bases
ATGGAACCGATAGATTTTCAGCGCCGTAAATGGCTGGCGCTCGGTGGTGCGGCAGTTGGATTTGCCCTGCTGCCAGGCGT
TGCTCAGGCGACCCTCTCTACGCCGCGCCCGCGGGTGCTGGTGTTCAATAACTTAAATACCGGTGAGCGCCTACGCGCCG
AGTTTTTTGATGGCCGCGCCTATATTCCTGAGGAGTTGGCGCGTCTAAATCACTTTTTCCGCGACTATCGCGCCAATCTG
GTTAAGCGGATCGATCCGCGTCTGTTTGATCATATCTTCCGCCTTCAGGTGATGCTGGGCAGTAAGAAGCCGATTCAGCT
GGTGTCCGGCTATCGCTCGCCCCATACCAACAGTGAGCTGCGCGGGCGCAGCCGCGGCGTAGCCAAGCAGAGCTTCCATA
CCAAGGGGCAGGCGATGGATTTCCACATCGATGGCGTGACGCTGGCTAATGTGCGTAAGGCGGCGATGCGTATGCGCGTC
GGCGGCGTAGGTTATTATCCGCGCAGTAATTTTGTTCATATTGATACCGGGCCGGTGAGAAGTTGGTGA

Upstream 100 bases:

>100_bases
CGGCGGTGCTGGACGCGGGATAACAGGGGGTCGCACTGGCTCCAATCTGCGCGCTTTGGGCGTGTTATTCAGACACTTTT
TGGCCGGGTTATATTTGCTC

Downstream 100 bases:

>100_bases
TCGTCGCGCGGATGCGTATGATGGAGTCTGGTAAAGGCGACTGCCGGCCGTGAGCCGGCATTTTTATGCGCGGAGAGTAC
CATGAAATACCACATCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MEPIDFQRRKWLALGGAAVGFALLPGVAQATLSTPRPRVLVFNNLNTGERLRAEFFDGRAYIPEELARLNHFFRDYRANL
VKRIDPRLFDHIFRLQVMLGSKKPIQLVSGYRSPHTNSELRGRSRGVAKQSFHTKGQAMDFHIDGVTLANVRKAAMRMRV
GGVGYYPRSNFVHIDTGPVRSW

Sequences:

>Translated_182_residues
MEPIDFQRRKWLALGGAAVGFALLPGVAQATLSTPRPRVLVFNNLNTGERLRAEFFDGRAYIPEELARLNHFFRDYRANL
VKRIDPRLFDHIFRLQVMLGSKKPIQLVSGYRSPHTNSELRGRSRGVAKQSFHTKGQAMDFHIDGVTLANVRKAAMRMRV
GGVGYYPRSNFVHIDTGPVRSW
>Mature_182_residues
MEPIDFQRRKWLALGGAAVGFALLPGVAQATLSTPRPRVLVFNNLNTGERLRAEFFDGRAYIPEELARLNHFFRDYRANL
VKRIDPRLFDHIFRLQVMLGSKKPIQLVSGYRSPHTNSELRGRSRGVAKQSFHTKGQAMDFHIDGVTLANVRKAAMRMRV
GGVGYYPRSNFVHIDTGPVRSW

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=182, Percent_Identity=71.4285714285714, Blast_Score=281, Evalue=2e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 20707; Mature: 20707

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPIDFQRRKWLALGGAAVGFALLPGVAQATLSTPRPRVLVFNNLNTGERLRAEFFDGRA
CCCCCCCHHHEEHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCC
YIPEELARLNHFFRDYRANLVKRIDPRLFDHIFRLQVMLGSKKPIQLVSGYRSPHTNSEL
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHH
RGRSRGVAKQSFHTKGQAMDFHIDGVTLANVRKAAMRMRVGGVGYYPRSNFVHIDTGPVR
CCCCCCCHHHHHCCCCCEEEEEECCEEHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC
SW
CC
>Mature Secondary Structure
MEPIDFQRRKWLALGGAAVGFALLPGVAQATLSTPRPRVLVFNNLNTGERLRAEFFDGRA
CCCCCCCHHHEEHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCCC
YIPEELARLNHFFRDYRANLVKRIDPRLFDHIFRLQVMLGSKKPIQLVSGYRSPHTNSEL
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHH
RGRSRGVAKQSFHTKGQAMDFHIDGVTLANVRKAAMRMRVGGVGYYPRSNFVHIDTGPVR
CCCCCCCHHHHHCCCCCEEEEEECCEEHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCC
SW
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]