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The map label for this gene is fliM [H]

Identifier: 238920318

GI number: 238920318

Start: 2317953

End: 2318966

Strand: Direct

Name: fliM [H]

Synonym: NT01EI_2428

Alternate gene names: 238920318

Gene position: 2317953-2318966 (Clockwise)

Preceding gene: 238920317

Following gene: 238920319

Centisome position: 60.8

GC content: 57.2

Gene sequence:

>1014_bases
ATGTCCGATAGCATTCTGTCTCAAGCCGAAATAGACGCGCTGCTCAATGGCGATAGCGATGCCGCGCCCAGCGAGCAGCA
TGCGTCACTGGAAACCCACGACGGCGAAGTCCGTCCCTACGATCCCACCACCCAGCGACGCGTCGTGCGCGAACGTCTGC
AGGCGCTGGAGATCATCAACGAGCGTTTCGCCCGTCAGTTCCGCATGGGGCTGTTTAACCTGCTGCGACGCAGCCCAGAT
ATCACGGTAGGCGCGGTACGTATTCAGCCCTACCATGAGTTTGCCCGTAACCTACCGGTGCCGACCAACCTCAACCTGGT
ACACCTGAAGCCACTGCGCGGCACCGCGCTGATGGTCTTCGAACCCAGCCTGGTATTTATGGCGGTCGATAACCTGTTCG
GCGGCGATGGCCGCTTCCCCACCAAGGTGGACGGACGTGAGTTTACTCACACCGAACAGCGGGTTATCCAGAGCATGCTG
CGACTGGCGCTGGACGCCTATCGCGATGCCTGGAGCGCCATCTTCAAGCTGGACATCGAATATGTCCGCTCAGAGATCCA
GGTAAAATTTACCAATATCACCACCTCTCCTAACGATATCGTGGTCACGACACCCTTTACCGTTGAGGTCGGAGCACTGA
GTGGGGAGTTCAATATCTGCATCCCCTTCTCAATGATCGAACCGCTGCGCGAGCTGCTGGTCAACCCGCCGCTGGAGAAC
TCCAAACAGGAGGATCAGCACTGGCGCGATACCCTTAGCAAGCAGGTACAACACTCCGAGCTGGAGCTGGTGGCCGATTT
TGTCGACATTCCGCTGCGTCTGTCCGACGTCCTTAAGCTGCAGATCGGCGACGTATTGCCCATCGACCGGCCCGATCGAC
TGGTAGCCAACGTAGACGGTGTGCCGGTGTTAACCTGCCAATATGGCTGCTATCACGGCCAGTATGCACTGCGCGTAGAA
AAAATGATTAACCCTATTTTAGATGCGACTTCGCGAGGAAATTCCGATGAGTGA

Upstream 100 bases:

>100_bases
ACGAAATTAAATCCACCCTGCGCGCGCCGGTCGTCAGCGGCCAGCCGCCACAGATCGTCAATGACGTTATGTTCACAGCG
TTCATCCTGCGGTAACCGTT

Downstream 100 bases:

>100_bases
CGCCAACAAGCCGTCAGCTGACGCTCAGGATGACGCCGCCGACCTGTGGGCGGAAGCAATGGGAGAACAACAGACCGCCG
CTCAGAATAACGGCGATATT

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSDSILSQAEIDALLNGDSDAAPSEQHASLETHDGEVRPYDPTTQRRVVRERLQALEIINERFARQFRMGLFNLLRRSPD
ITVGAVRIQPYHEFARNLPVPTNLNLVHLKPLRGTALMVFEPSLVFMAVDNLFGGDGRFPTKVDGREFTHTEQRVIQSML
RLALDAYRDAWSAIFKLDIEYVRSEIQVKFTNITTSPNDIVVTTPFTVEVGALSGEFNICIPFSMIEPLRELLVNPPLEN
SKQEDQHWRDTLSKQVQHSELELVADFVDIPLRLSDVLKLQIGDVLPIDRPDRLVANVDGVPVLTCQYGCYHGQYALRVE
KMINPILDATSRGNSDE

Sequences:

>Translated_337_residues
MSDSILSQAEIDALLNGDSDAAPSEQHASLETHDGEVRPYDPTTQRRVVRERLQALEIINERFARQFRMGLFNLLRRSPD
ITVGAVRIQPYHEFARNLPVPTNLNLVHLKPLRGTALMVFEPSLVFMAVDNLFGGDGRFPTKVDGREFTHTEQRVIQSML
RLALDAYRDAWSAIFKLDIEYVRSEIQVKFTNITTSPNDIVVTTPFTVEVGALSGEFNICIPFSMIEPLRELLVNPPLEN
SKQEDQHWRDTLSKQVQHSELELVADFVDIPLRLSDVLKLQIGDVLPIDRPDRLVANVDGVPVLTCQYGCYHGQYALRVE
KMINPILDATSRGNSDE
>Mature_336_residues
SDSILSQAEIDALLNGDSDAAPSEQHASLETHDGEVRPYDPTTQRRVVRERLQALEIINERFARQFRMGLFNLLRRSPDI
TVGAVRIQPYHEFARNLPVPTNLNLVHLKPLRGTALMVFEPSLVFMAVDNLFGGDGRFPTKVDGREFTHTEQRVIQSMLR
LALDAYRDAWSAIFKLDIEYVRSEIQVKFTNITTSPNDIVVTTPFTVEVGALSGEFNICIPFSMIEPLRELLVNPPLENS
KQEDQHWRDTLSKQVQHSELELVADFVDIPLRLSDVLKLQIGDVLPIDRPDRLVANVDGVPVLTCQYGCYHGQYALRVEK
MINPILDATSRGNSDE

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein. Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=329, Percent_Identity=78.419452887538, Blast_Score=537, Evalue=1e-154,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 38134; Mature: 38003

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSILSQAEIDALLNGDSDAAPSEQHASLETHDGEVRPYDPTTQRRVVRERLQALEIIN
CCCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ERFARQFRMGLFNLLRRSPDITVGAVRIQPYHEFARNLPVPTNLNLVHLKPLRGTALMVF
HHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCCCCCCCCCEEEEECCCCCEEEEE
EPSLVFMAVDNLFGGDGRFPTKVDGREFTHTEQRVIQSMLRLALDAYRDAWSAIFKLDIE
CCCEEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVRSEIQVKFTNITTSPNDIVVTTPFTVEVGALSGEFNICIPFSMIEPLRELLVNPPLEN
HHHCEEEEEEEEEECCCCCEEEECCCEEEEECCCCCEEEEECHHHHHHHHHHHCCCCCCC
SKQEDQHWRDTLSKQVQHSELELVADFVDIPLRLSDVLKLQIGDVLPIDRPDRLVANVDG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEECCCC
VPVLTCQYGCYHGQYALRVEKMINPILDATSRGNSDE
CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDSILSQAEIDALLNGDSDAAPSEQHASLETHDGEVRPYDPTTQRRVVRERLQALEIIN
CCCHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ERFARQFRMGLFNLLRRSPDITVGAVRIQPYHEFARNLPVPTNLNLVHLKPLRGTALMVF
HHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHCCCCCCCCCCEEEEECCCCCEEEEE
EPSLVFMAVDNLFGGDGRFPTKVDGREFTHTEQRVIQSMLRLALDAYRDAWSAIFKLDIE
CCCEEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVRSEIQVKFTNITTSPNDIVVTTPFTVEVGALSGEFNICIPFSMIEPLRELLVNPPLEN
HHHCEEEEEEEEEECCCCCEEEECCCEEEEECCCCCEEEEECHHHHHHHHHHHCCCCCCC
SKQEDQHWRDTLSKQVQHSELELVADFVDIPLRLSDVLKLQIGDVLPIDRPDRLVANVDG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCEEECCCC
VPVLTCQYGCYHGQYALRVEKMINPILDATSRGNSDE
CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3519573; 9097040; 9278503; 2651416 [H]