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The map label for this gene is fliJ [H]

Identifier: 238920315

GI number: 238920315

Start: 2315666

End: 2316106

Strand: Direct

Name: fliJ [H]

Synonym: NT01EI_2425

Alternate gene names: 238920315

Gene position: 2315666-2316106 (Clockwise)

Preceding gene: 238920314

Following gene: 238920316

Centisome position: 60.74

GC content: 58.05

Gene sequence:

>441_bases
ATGTCATCAGCATTAAATACCCTACGCGAACTGGCACAGCAGGATGTCGATCAGGCAACCCGGGCACTGGGCCATGCCCG
TCAGGCCTGTCAGCAGGCCCAGCAGCAGCTGGAGATGCTACTGAACTATCAGGACGAGTATCGCAGGCGCCTTAATCAGG
GGATGAGCGGCGGTATCGCCGCGGCCAGCTGGTACAACTACCAACAGTTTATCCTGACGCTGGAGCAGGCCATCGATCAG
CACCGGGCACAGTTGGCCCAGTGCCACTCCCGCCTGGAACAGGCAACCCACAGCTGGCAGCAGAAACAGCAACGCCTGAG
CGCTTTCAGCGCCCTGCATGAGCGCGCCGAGCTACAGCGCCAGATAGTACTGAATAAACAGGATCAAAAACGGATGGATG
AGTACGCCCAGCGTGCCAGCCAAAGGAGAGAAAAATCATGA

Upstream 100 bases:

>100_bases
AACAGGGCATTTTTGAGCGCAGCGACTATCAACAGTCCTGTACGGCGCTGCAGACGCTGTTCAGCACATAGCCATCGCCA
AGGCATAAGGGGAGGTTGAC

Downstream 100 bases:

>100_bases
CAACGCCCGTTGCCATCACGCTTAATACCGCCTCCGCATCGACGGACAGCCCGGCGGCGGACGCCGGCGATGGCTTCCCG
TTTGCCGACATTCTGGCGCT

Product: flagellar export protein FliJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSSALNTLRELAQQDVDQATRALGHARQACQQAQQQLEMLLNYQDEYRRRLNQGMSGGIAAASWYNYQQFILTLEQAIDQ
HRAQLAQCHSRLEQATHSWQQKQQRLSAFSALHERAELQRQIVLNKQDQKRMDEYAQRASQRREKS

Sequences:

>Translated_146_residues
MSSALNTLRELAQQDVDQATRALGHARQACQQAQQQLEMLLNYQDEYRRRLNQGMSGGIAAASWYNYQQFILTLEQAIDQ
HRAQLAQCHSRLEQATHSWQQKQQRLSAFSALHERAELQRQIVLNKQDQKRMDEYAQRASQRREKS
>Mature_145_residues
SSALNTLRELAQQDVDQATRALGHARQACQQAQQQLEMLLNYQDEYRRRLNQGMSGGIAAASWYNYQQFILTLEQAIDQH
RAQLAQCHSRLEQATHSWQQKQQRLSAFSALHERAELQRQIVLNKQDQKRMDEYAQRASQRREKS

Specific function: Flagellar protein that affects chemotactic events [H]

COG id: COG2882

COG function: function code NUO; Flagellar biosynthesis chaperone

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliJ family [H]

Homologues:

Organism=Escherichia coli, GI1788252, Length=141, Percent_Identity=51.063829787234, Blast_Score=144, Evalue=3e-36,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018006
- InterPro:   IPR012823 [H]

Pfam domain/function: PF02050 FliJ [H]

EC number: NA

Molecular weight: Translated: 17099; Mature: 16968

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSALNTLRELAQQDVDQATRALGHARQACQQAQQQLEMLLNYQDEYRRRLNQGMSGGIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHH
AASWYNYQQFILTLEQAIDQHRAQLAQCHSRLEQATHSWQQKQQRLSAFSALHERAELQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIVLNKQDQKRMDEYAQRASQRREKS
HHHHCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSALNTLRELAQQDVDQATRALGHARQACQQAQQQLEMLLNYQDEYRRRLNQGMSGGIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHH
AASWYNYQQFILTLEQAIDQHRAQLAQCHSRLEQATHSWQQKQQRLSAFSALHERAELQR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIVLNKQDQKRMDEYAQRASQRREKS
HHHHCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]