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The map label for this gene is fliH [H]

Identifier: 238920313

GI number: 238920313

Start: 2313526

End: 2314281

Strand: Direct

Name: fliH [H]

Synonym: NT01EI_2423

Alternate gene names: 238920313

Gene position: 2313526-2314281 (Clockwise)

Preceding gene: 238920312

Following gene: 238920314

Centisome position: 60.69

GC content: 64.02

Gene sequence:

>756_bases
ATGTCTAACTCTCCGTTCCGTAAACCGGTGCTGCCCAAGGGCAGCCCCGAAGCCAGCGATCCGCGCTGGAAACGCTGGAA
AATGCATGACTTCGCCGCACCGCGCCGACCGCTGCGTCCACGTATCGAGGCGGACGAGCAGAGCAGCAGCGCCGCCAGCA
GCGCCGCTGCCCAGGCTGCGGCCCAAGAGGCCGAAGCTGAGCGTCTGCGTCACGACGCCCAGCAACAGGGGCTGCAGATC
GGCCTGCAGCAGGGGGAAAAACAGGGCTACGACGTCGGCTTCCAGCAGGGACTGACAGAGGGGCGCACCCAGGGGATGCA
ACAGGCGATGGCCGAGCAGCAGCCGATGCTGGATACCTGGCGTACCCTGTCAGCCGAATTTCAGCGCTCCCTCAACTCCC
TCGATAGCGTCATTGCGGCACGCCTGATGCAACTGGCGCTGACTGCCGCCAAGCAGATCATCGGACAGACTCCACTGTGC
GACGCCAGTGGGGTACTGCAGCAAATTCAGCAGCTGATCCACCAGGATCCACTGTTCAGCGGCAGTCTGCAGTTGCGTGT
CAACCCACAGGATTTACCGCTGGTCCAACAGCATCTGGGGGTACAGCTTGAGCAACAGGGCTGGAAGCTGCTGGCCGATA
CCCAGCTGCACCGCGGCGGCTGTAAGCTCAGTGCCGAAGGCGGTGAGCTGGATGCCAGCATCGCCACCCGCTGGCAGGAG
CTGTGCAAGCTGGCCGCACCGGAGCTGCCGCTATGA

Upstream 100 bases:

>100_bases
CGCCTGTCGCTGGTCGAGGCGGAGCAGAAGTCTATCCTGCTGATCGTCCGTCGTCTGGCAGAAACCGGCGAGATCGTGAT
TGGCGCCGGCGAGGATACCT

Downstream 100 bases:

>100_bases
GCAGTCGGCTTGACACCTGGCTTGGTGCGCTGGCCAGCCTTGAGCGCCGTATCCCTACTCTGCCGGAGGCGCGCCGCTAC
GGTAAGCTGACCCGCGCCAC

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSNSPFRKPVLPKGSPEASDPRWKRWKMHDFAAPRRPLRPRIEADEQSSSAASSAAAQAAAQEAEAERLRHDAQQQGLQI
GLQQGEKQGYDVGFQQGLTEGRTQGMQQAMAEQQPMLDTWRTLSAEFQRSLNSLDSVIAARLMQLALTAAKQIIGQTPLC
DASGVLQQIQQLIHQDPLFSGSLQLRVNPQDLPLVQQHLGVQLEQQGWKLLADTQLHRGGCKLSAEGGELDASIATRWQE
LCKLAAPELPL

Sequences:

>Translated_251_residues
MSNSPFRKPVLPKGSPEASDPRWKRWKMHDFAAPRRPLRPRIEADEQSSSAASSAAAQAAAQEAEAERLRHDAQQQGLQI
GLQQGEKQGYDVGFQQGLTEGRTQGMQQAMAEQQPMLDTWRTLSAEFQRSLNSLDSVIAARLMQLALTAAKQIIGQTPLC
DASGVLQQIQQLIHQDPLFSGSLQLRVNPQDLPLVQQHLGVQLEQQGWKLLADTQLHRGGCKLSAEGGELDASIATRWQE
LCKLAAPELPL
>Mature_250_residues
SNSPFRKPVLPKGSPEASDPRWKRWKMHDFAAPRRPLRPRIEADEQSSSAASSAAAQAAAQEAEAERLRHDAQQQGLQIG
LQQGEKQGYDVGFQQGLTEGRTQGMQQAMAEQQPMLDTWRTLSAEFQRSLNSLDSVIAARLMQLALTAAKQIIGQTPLCD
ASGVLQQIQQLIHQDPLFSGSLQLRVNPQDLPLVQQHLGVQLEQQGWKLLADTQLHRGGCKLSAEGGELDASIATRWQEL
CKLAAPELPL

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

Organism=Escherichia coli, GI87082004, Length=225, Percent_Identity=48, Blast_Score=186, Evalue=1e-48,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 27641; Mature: 27509

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSPFRKPVLPKGSPEASDPRWKRWKMHDFAAPRRPLRPRIEADEQSSSAASSAAAQAA
CCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AQEAEAERLRHDAQQQGLQIGLQQGEKQGYDVGFQQGLTEGRTQGMQQAMAEQQPMLDTW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
RTLSAEFQRSLNSLDSVIAARLMQLALTAAKQIIGQTPLCDASGVLQQIQQLIHQDPLFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
GSLQLRVNPQDLPLVQQHLGVQLEQQGWKLLADTQLHRGGCKLSAEGGELDASIATRWQE
CCEEEEECCCCCHHHHHHHCCEEHHCCCEEHHHHHHHCCCCEECCCCCCCHHHHHHHHHH
LCKLAAPELPL
HHHHCCCCCCC
>Mature Secondary Structure 
SNSPFRKPVLPKGSPEASDPRWKRWKMHDFAAPRRPLRPRIEADEQSSSAASSAAAQAA
CCCCCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
AQEAEAERLRHDAQQQGLQIGLQQGEKQGYDVGFQQGLTEGRTQGMQQAMAEQQPMLDTW
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
RTLSAEFQRSLNSLDSVIAARLMQLALTAAKQIIGQTPLCDASGVLQQIQQLIHQDPLFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
GSLQLRVNPQDLPLVQQHLGVQLEQQGWKLLADTQLHRGGCKLSAEGGELDASIATRWQE
CCEEEEECCCCCHHHHHHHCCEEHHCCCEEHHHHHHHCCCCEECCCCCCCHHHHHHHHHH
LCKLAAPELPL
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 8224881 [H]