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The map label for this gene is fliD [H]

Identifier: 238920304

GI number: 238920304

Start: 2307028

End: 2308455

Strand: Direct

Name: fliD [H]

Synonym: NT01EI_2414

Alternate gene names: 238920304

Gene position: 2307028-2308455 (Clockwise)

Preceding gene: 238920303

Following gene: 238920305

Centisome position: 60.52

GC content: 51.4

Gene sequence:

>1428_bases
ATGGCAACCATTTCATCACTGGGGATCGGCTCTGGCCTCGACCTAAACTCTCTGCTGACCAAAATGACCAAGCTCGAACA
GCAGCAGTTAACTCCCTATAAAAACCAGCAGGTCAGCTATCAGTCCAAGCTGACAGCCTACGGTACCCTGAAAGGCGCAT
TGGAAAAGTTTGATGATGTAAGCAAGGATCTGGCCAAACTTGATACCTTTACCATTACCAAGGCCAGTACGCACGACCAG
TTCAACGTCACCACCACCTCCAACGCCATACCGGGGAATTACTCCATCAGTATTTCCCAGCTGGCCCAGGCCCAAAGCCT
GACCGCCCAGACCCATGCCGACAGCCAGACCAGTGCACAGGGAACGCCCGGAGCCAGTAGCCGTGAACTCACCATCAGTG
TGGGAACCCCGCCCAAAGAGACCCGGATCGCACTTGCTGATGATCAGACCTCACTGCGTGGCATGCGGGATGCCATCAAT
AAGTCTGGCGCCAATGTTAAGGCCAGTATCATCCAGATCTCCGACAAGGAATATACCCTTTCCATTACCGCCAATAAGAC
CGGTAAGAGCAGTAATATCAAGCTGAACGTCAGCGGTGACAGCAAACTGGCCGGTATGCTGAACTATAACGGTACCGAGC
CTGCCAATAAAACGGGCATGAAAGGAACCGTGCAGGGGCAGGATGCCGAACTGACGCTTAACGGAATTCCAATCACCCGC
AGCAGCAACCAGATAACCGACGTTCCCCAGGGCGTTACCCTGGAGCTGAAAACGACAACGCCTAAAGGCAGCCCGCAGAA
TCTGGTGATCAGCAGTGACGGTGATGGCGTCAGCAAAAAAATTCATGAATGGGCTGACAGCTATAACTCGCTCATCGATA
CCTTTCAGGCGCTGACCAAATTCACCCCGGTAAAACAGGGGCAGGCACCGGCCTTTAACAATGGACCTCTGTTGGGTGAC
AGCACTCTGCGGGCCATCCAGTCCAGCATTAAAGGTGCTCTGAGCTCCGAGCAAAACAACCGAAACATCAAGGGTATCGG
TAACCTGGGCATCAATACTGATCCGCTCACCGGTAAACTGAGCATCGATGATAAAAAGCTGAAACACGTTATTGATGAGT
ATCCGGGACAGGTCCAGAACCTCTTTATCGGTAACGGTAAGGATACCGGGATTGCCAATATGGTACACAAGGAAATCCGG
GACTATGTCAAAAGCAACGGCGTCCTCGACTCAACCACCAGGAGTATCAACAACAGCCTGCAGAGTCTGAGTAACCAGAT
CGACAGCATTAACCAGAATATTGATGCCACGATCAGCCGTTATAAAGCGCAGTTTGTCCATCTGGATACCCTGATGTCCA
AACTCAACGGCACCAGCTCTTACCTGACCCAACAATTCAGTGCGATGAATAAATCATCAGATAAATAG

Upstream 100 bases:

>100_bases
TCTTATTGCCCCATCGCTTTTTACCATTTATCTGTAAACTTTTATCAGAAAGAGCCGATAACTCACATCAGTGTACTCGT
GATAAAGAAAGGAAATACGC

Downstream 100 bases:

>100_bases
AAAAGGTAACCACGACCATGTACAACACCAGGGGTACACAGGCCTATGCACAGGTCGGACTGGAAAGCGCTGTCATGAGC
GCCAGTCCGCACCAACTGAT

Product: flagellar hook-associated protein 2

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MATISSLGIGSGLDLNSLLTKMTKLEQQQLTPYKNQQVSYQSKLTAYGTLKGALEKFDDVSKDLAKLDTFTITKASTHDQ
FNVTTTSNAIPGNYSISISQLAQAQSLTAQTHADSQTSAQGTPGASSRELTISVGTPPKETRIALADDQTSLRGMRDAIN
KSGANVKASIIQISDKEYTLSITANKTGKSSNIKLNVSGDSKLAGMLNYNGTEPANKTGMKGTVQGQDAELTLNGIPITR
SSNQITDVPQGVTLELKTTTPKGSPQNLVISSDGDGVSKKIHEWADSYNSLIDTFQALTKFTPVKQGQAPAFNNGPLLGD
STLRAIQSSIKGALSSEQNNRNIKGIGNLGINTDPLTGKLSIDDKKLKHVIDEYPGQVQNLFIGNGKDTGIANMVHKEIR
DYVKSNGVLDSTTRSINNSLQSLSNQIDSINQNIDATISRYKAQFVHLDTLMSKLNGTSSYLTQQFSAMNKSSDK

Sequences:

>Translated_475_residues
MATISSLGIGSGLDLNSLLTKMTKLEQQQLTPYKNQQVSYQSKLTAYGTLKGALEKFDDVSKDLAKLDTFTITKASTHDQ
FNVTTTSNAIPGNYSISISQLAQAQSLTAQTHADSQTSAQGTPGASSRELTISVGTPPKETRIALADDQTSLRGMRDAIN
KSGANVKASIIQISDKEYTLSITANKTGKSSNIKLNVSGDSKLAGMLNYNGTEPANKTGMKGTVQGQDAELTLNGIPITR
SSNQITDVPQGVTLELKTTTPKGSPQNLVISSDGDGVSKKIHEWADSYNSLIDTFQALTKFTPVKQGQAPAFNNGPLLGD
STLRAIQSSIKGALSSEQNNRNIKGIGNLGINTDPLTGKLSIDDKKLKHVIDEYPGQVQNLFIGNGKDTGIANMVHKEIR
DYVKSNGVLDSTTRSINNSLQSLSNQIDSINQNIDATISRYKAQFVHLDTLMSKLNGTSSYLTQQFSAMNKSSDK
>Mature_474_residues
ATISSLGIGSGLDLNSLLTKMTKLEQQQLTPYKNQQVSYQSKLTAYGTLKGALEKFDDVSKDLAKLDTFTITKASTHDQF
NVTTTSNAIPGNYSISISQLAQAQSLTAQTHADSQTSAQGTPGASSRELTISVGTPPKETRIALADDQTSLRGMRDAINK
SGANVKASIIQISDKEYTLSITANKTGKSSNIKLNVSGDSKLAGMLNYNGTEPANKTGMKGTVQGQDAELTLNGIPITRS
SNQITDVPQGVTLELKTTTPKGSPQNLVISSDGDGVSKKIHEWADSYNSLIDTFQALTKFTPVKQGQAPAFNNGPLLGDS
TLRAIQSSIKGALSSEQNNRNIKGIGNLGINTDPLTGKLSIDDKKLKHVIDEYPGQVQNLFIGNGKDTGIANMVHKEIRD
YVKSNGVLDSTTRSINNSLQSLSNQIDSINQNIDATISRYKAQFVHLDTLMSKLNGTSSYLTQQFSAMNKSSDK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=468, Percent_Identity=41.6666666666667, Blast_Score=315, Evalue=3e-87,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 50890; Mature: 50758

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATISSLGIGSGLDLNSLLTKMTKLEQQQLTPYKNQQVSYQSKLTAYGTLKGALEKFDDV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SKDLAKLDTFTITKASTHDQFNVTTTSNAIPGNYSISISQLAQAQSLTAQTHADSQTSAQ
HHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCC
GTPGASSRELTISVGTPPKETRIALADDQTSLRGMRDAINKSGANVKASIIQISDKEYTL
CCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEECCEEEE
SITANKTGKSSNIKLNVSGDSKLAGMLNYNGTEPANKTGMKGTVQGQDAELTLNGIPITR
EEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCCEEEECCEEEEC
SSNQITDVPQGVTLELKTTTPKGSPQNLVISSDGDGVSKKIHEWADSYNSLIDTFQALTK
CCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FTPVKQGQAPAFNNGPLLGDSTLRAIQSSIKGALSSEQNNRNIKGIGNLGINTDPLTGKL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEE
SIDDKKLKHVIDEYPGQVQNLFIGNGKDTGIANMVHKEIRDYVKSNGVLDSTTRSINNSL
ECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QSLSNQIDSINQNIDATISRYKAQFVHLDTLMSKLNGTSSYLTQQFSAMNKSSDK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ATISSLGIGSGLDLNSLLTKMTKLEQQQLTPYKNQQVSYQSKLTAYGTLKGALEKFDDV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SKDLAKLDTFTITKASTHDQFNVTTTSNAIPGNYSISISQLAQAQSLTAQTHADSQTSAQ
HHHHHHHCCEEEEECCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCC
GTPGASSRELTISVGTPPKETRIALADDQTSLRGMRDAINKSGANVKASIIQISDKEYTL
CCCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEEECCEEEE
SITANKTGKSSNIKLNVSGDSKLAGMLNYNGTEPANKTGMKGTVQGQDAELTLNGIPITR
EEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEECCCCCEEEECCEEEEC
SSNQITDVPQGVTLELKTTTPKGSPQNLVISSDGDGVSKKIHEWADSYNSLIDTFQALTK
CCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FTPVKQGQAPAFNNGPLLGDSTLRAIQSSIKGALSSEQNNRNIKGIGNLGINTDPLTGKL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEE
SIDDKKLKHVIDEYPGQVQNLFIGNGKDTGIANMVHKEIRDYVKSNGVLDSTTRSINNSL
ECCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QSLSNQIDSINQNIDATISRYKAQFVHLDTLMSKLNGTSSYLTQQFSAMNKSSDK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2193164; 11677609; 1527488; 9878359; 11118149 [H]