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The map label for this gene is fliC [H]

Identifier: 238920302

GI number: 238920302

Start: 2306028

End: 2306306

Strand: Reverse

Name: fliC [H]

Synonym: NT01EI_2412

Alternate gene names: 238920302

Gene position: 2306306-2306028 (Counterclockwise)

Preceding gene: 238920307

Following gene: 238920301

Centisome position: 60.5

GC content: 52.69

Gene sequence:

>279_bases
TTGTCCCTGCTGGCACAGAACGGCTCCAACTCTGAGAGCGATCTGCCGTCCATCCAGGATGAAATCCCCCAGCGTCTGGA
TGAAATCAACCGTATCTCTATCTCTGCCCAGACCGGCTTTAACGGTGTGAAGATCCTGAGCAAGGATCAGAGCGTCGGTA
TCTGTCTGAGCAAGATTGATGTAACGACCCTGAAGATGAATACCTTTGATATTACCAGGCCGGTACCGCGCTACTGGCTA
AGACCAACCGGCCTATTCAGGACGTACTGTCCCTGCTGA

Upstream 100 bases:

>100_bases
CGTACACGCAGTACGTGAGGATGGTGAGCACAGCCCCGGACCGAAATGGCAAATCAAATAGCCTAATGGGATAGGATCTG
AGTTTATCAATACCAATATT

Downstream 100 bases:

>100_bases
GTTAATGGTAGTCGCCTGCCTGGTGCAGGCATTGTCCGTAGCGATATAAATAACCGCCTTCGGGAAAATACGTTCACTGA
AGAGATTGCAGGGTGAACGG

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MSLLAQNGSNSESDLPSIQDEIPQRLDEINRISISAQTGFNGVKILSKDQSVGICLSKIDVTTLKMNTFDITRPVPRYWL
RPTGLFRTYCPC

Sequences:

>Translated_92_residues
MSLLAQNGSNSESDLPSIQDEIPQRLDEINRISISAQTGFNGVKILSKDQSVGICLSKIDVTTLKMNTFDITRPVPRYWL
RPTGLFRTYCPC
>Mature_91_residues
SLLAQNGSNSESDLPSIQDEIPQRLDEINRISISAQTGFNGVKILSKDQSVGICLSKIDVTTLKMNTFDITRPVPRYWLR
PTGLFRTYCPC

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=83, Percent_Identity=44.578313253012, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 10305; Mature: 10174

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLAQNGSNSESDLPSIQDEIPQRLDEINRISISAQTGFNGVKILSKDQSVGICLSKID
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCEEEEECCCCCEEEEECCE
VTTLKMNTFDITRPVPRYWLRPTGLFRTYCPC
EEEEEECCEECCCCCCHHHCCCCCCCEECCCC
>Mature Secondary Structure 
SLLAQNGSNSESDLPSIQDEIPQRLDEINRISISAQTGFNGVKILSKDQSVGICLSKID
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCCEEEEECCCCCEEEEECCE
VTTLKMNTFDITRPVPRYWLRPTGLFRTYCPC
EEEEEECCEECCCCCCHHHCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2673930 [H]