Click here to switch to the map view.

The map label for this gene is fliC [H]

Identifier: 238920293

GI number: 238920293

Start: 2299661

End: 2300731

Strand: Reverse

Name: fliC [H]

Synonym: NT01EI_2403

Alternate gene names: 238920293

Gene position: 2300731-2299661 (Counterclockwise)

Preceding gene: 238920294

Following gene: 238920292

Centisome position: 60.35

GC content: 52.75

Gene sequence:

>1071_bases
ATGGCACAAGTTATCAATACCAATATTCTGTCCCTGCAGGCACAGAACAATCTGAACAAATCCCAGTCTGCCCTGGGTAC
CGCCATTGAGCGTCTCTCTTCCGGGCTGCGTATCAACAGCGCCAAGGATGATGCCGCCGGTCAGGCGATCGCCAACCGCT
TTACCGCCAACATCAACGGCCTGACCCAGGCTTCCCGCAACGCCAACGACGGTATCTCTCTGGCACAGACCACTGAAGGT
GCCCTGAATGAAGTCAACGATAACCTGCAGAACATCCGTCGTCTGACCGTTCAGGCACAAAACGGCTCCAACTCTGAGAG
CGATCTGCAGTCCATCCAGGATGAAATCACCCAGCGTCTGGATGAAATCAACCGTATCTCTGCCCAGACCGACTTTAACG
GTGTGAAAGTCCTGAGCAAGGATCAGACCCTGACCATTCAGGTTGGTGCTGACGATGGCCAGACCATCGGGATCAATCTG
AGCAAGATTGATGCAACGACCCTGAAGCTGAATACCTTCGATGTTACTAACAATAAAAACCGTGTAGGCAGCGCAATTGA
GGCCGGTACCTCTATTAATTATACCAACGCAGGTAAAGCGGCTACCGGCTCTTTGGAGCTGACTAAAGGTCAGACTCTGG
TTTCCGGTACCGATGCTACCGGTGCTGCAACCTATTATCTGAAGGGTGTTGATGCAGCAACCGGTAAGGTAACCTACAGC
TCTGTCAAATTTACTGTCGATGCAAAAGATGCAACCAAAGTTACTGTTGCGGCTGATAAAGATGTCACCAAAGATATTCA
GACTCCGCTGGCTGATGTGGATTCAGCACTGGCTCAGGTAGACAAACTGCGCAGCGGCCTGGGTGCGGTACAGAACCGTT
TCGATTCTGTTATCAGCAACCTGGATAGCACCGTCACCAACCTGTCCGCCTCCCGCTCCCGTATTCAGGATGCTGACTAC
GCGACCGAGGTTTCTGATATGAGCCGTGCGCAGATCCTGCAGCAGGCCGGTACTGCAGTGCTGGCCAAGGCTAACCAGTC
TACCCAGAACGTGCTCTCCCTGCTGCGTTAA

Upstream 100 bases:

>100_bases
GAGAAAAAAAGATAATCTTTATTAAAGTTTTCACTATGGGTGCCGATAGTAAAAATCGCAAACAAATGCGTCGTACAGTA
TTTCATTAAGGATTTCTATC

Downstream 100 bases:

>100_bases
TCCCGGCCGGAGACGTTACACGTTTCTGTCAAACCCCGCCATGGCGGGGTTTTTTTGTATCCAGTGTATATGGCCGATTG
GCTTCACCTGGAGCAAAGCG

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 355

Protein sequence:

>356_residues
MAQVINTNILSLQAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANINGLTQASRNANDGISLAQTTEG
ALNEVNDNLQNIRRLTVQAQNGSNSESDLQSIQDEITQRLDEINRISAQTDFNGVKVLSKDQTLTIQVGADDGQTIGINL
SKIDATTLKLNTFDVTNNKNRVGSAIEAGTSINYTNAGKAATGSLELTKGQTLVSGTDATGAATYYLKGVDAATGKVTYS
SVKFTVDAKDATKVTVAADKDVTKDIQTPLADVDSALAQVDKLRSGLGAVQNRFDSVISNLDSTVTNLSASRSRIQDADY
ATEVSDMSRAQILQQAGTAVLAKANQSTQNVLSLLR

Sequences:

>Translated_356_residues
MAQVINTNILSLQAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANINGLTQASRNANDGISLAQTTEG
ALNEVNDNLQNIRRLTVQAQNGSNSESDLQSIQDEITQRLDEINRISAQTDFNGVKVLSKDQTLTIQVGADDGQTIGINL
SKIDATTLKLNTFDVTNNKNRVGSAIEAGTSINYTNAGKAATGSLELTKGQTLVSGTDATGAATYYLKGVDAATGKVTYS
SVKFTVDAKDATKVTVAADKDVTKDIQTPLADVDSALAQVDKLRSGLGAVQNRFDSVISNLDSTVTNLSASRSRIQDADY
ATEVSDMSRAQILQQAGTAVLAKANQSTQNVLSLLR
>Mature_355_residues
AQVINTNILSLQAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANINGLTQASRNANDGISLAQTTEGA
LNEVNDNLQNIRRLTVQAQNGSNSESDLQSIQDEITQRLDEINRISAQTDFNGVKVLSKDQTLTIQVGADDGQTIGINLS
KIDATTLKLNTFDVTNNKNRVGSAIEAGTSINYTNAGKAATGSLELTKGQTLVSGTDATGAATYYLKGVDAATGKVTYSS
VKFTVDAKDATKVTVAADKDVTKDIQTPLADVDSALAQVDKLRSGLGAVQNRFDSVISNLDSTVTNLSASRSRIQDADYA
TEVSDMSRAQILQQAGTAVLAKANQSTQNVLSLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=265, Percent_Identity=58.4905660377358, Blast_Score=259, Evalue=2e-70,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 37517; Mature: 37386

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVINTNILSLQAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANING
CCCEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCH
LTQASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGSNSESDLQSIQDEITQRL
HHHCCCCCCCCCEEHHHCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHH
DEINRISAQTDFNGVKVLSKDQTLTIQVGADDGQTIGINLSKIDATTLKLNTFDVTNNKN
HHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCEEEEEEEEECEEEEEEEEEEECCCCC
RVGSAIEAGTSINYTNAGKAATGSLELTKGQTLVSGTDATGAATYYLKGVDAATGKVTYS
HHCHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCEEEEEECCCCCCCEEEEE
SVKFTVDAKDATKVTVAADKDVTKDIQTPLADVDSALAQVDKLRSGLGAVQNRFDSVISN
EEEEEEECCCCEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDSTVTNLSASRSRIQDADYATEVSDMSRAQILQQAGTAVLAKANQSTQNVLSLLR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHC
>Mature Secondary Structure 
AQVINTNILSLQAQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANING
CCEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHCCCCH
LTQASRNANDGISLAQTTEGALNEVNDNLQNIRRLTVQAQNGSNSESDLQSIQDEITQRL
HHHCCCCCCCCCEEHHHCHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHH
DEINRISAQTDFNGVKVLSKDQTLTIQVGADDGQTIGINLSKIDATTLKLNTFDVTNNKN
HHHHHHHCCCCCCCEEEEECCCEEEEEEECCCCCEEEEEEEEECEEEEEEEEEEECCCCC
RVGSAIEAGTSINYTNAGKAATGSLELTKGQTLVSGTDATGAATYYLKGVDAATGKVTYS
HHCHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCEEEEEECCCCCCCEEEEE
SVKFTVDAKDATKVTVAADKDVTKDIQTPLADVDSALAQVDKLRSGLGAVQNRFDSVISN
EEEEEEECCCCEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDSTVTNLSASRSRIQDADYATEVSDMSRAQILQQAGTAVLAKANQSTQNVLSLLR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2673930 [H]