| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920278
Identifier: 238920278
GI number: 238920278
Start: 2286814
End: 2287164
Strand: Reverse
Name: 238920278
Synonym: NT01EI_2388
Alternate gene names: NA
Gene position: 2287164-2286814 (Counterclockwise)
Preceding gene: 238920279
Following gene: 238920277
Centisome position: 59.99
GC content: 53.56
Gene sequence:
>351_bases TTGGCTGAATTTGGCATCGTCGTGCCCCGGGGGATCCAACGGCTACAACTCCAGTTACCTGAGATCCTGGAAGATGCCGA TAACTCATTGCCATCTCTATTCCGTGCACAACTGAGTCTGTTGCACCACCATATGACATATCTGTTTGATATTGTCGCTG CGCCTGATCAGCACATTGAGCAGTGCTACCGGGGTGGGGGCAGTCCAACTATAGGGCAGGATCGTCTACCGGGGTGGGGG CAGTCCACCGCAAAAATGCACTATGTCAGCAAGATCCCGGGCATTGGCCCGATAACCGCCACCGTACTGATTGCAGCTAT CGGTAACACCAGCAATTTCGGGAATAGCTGA
Upstream 100 bases:
>100_bases GTCAAGAGACCTGAGCAGCAAGCTGTATTGGTACTTCACCGGAGTCGTCAGCGTTTCATCAGGCTACGGACCGCTCAGGC GAATCAAATTCGGGGGGCTA
Downstream 100 bases:
>100_bases CAGCCTGAGTTCCCGGACTTAACTCTCTCCCATAAAACCGGTACGGTTCAATTTCATTAACAAAGCCTTTGACTTGATGA ATCTGCCATTGCGGCATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MAEFGIVVPRGIQRLQLQLPEILEDADNSLPSLFRAQLSLLHHHMTYLFDIVAAPDQHIEQCYRGGGSPTIGQDRLPGWG QSTAKMHYVSKIPGIGPITATVLIAAIGNTSNFGNS
Sequences:
>Translated_116_residues MAEFGIVVPRGIQRLQLQLPEILEDADNSLPSLFRAQLSLLHHHMTYLFDIVAAPDQHIEQCYRGGGSPTIGQDRLPGWG QSTAKMHYVSKIPGIGPITATVLIAAIGNTSNFGNS >Mature_115_residues AEFGIVVPRGIQRLQLQLPEILEDADNSLPSLFRAQLSLLHHHMTYLFDIVAAPDQHIEQCYRGGGSPTIGQDRLPGWGQ STAKMHYVSKIPGIGPITATVLIAAIGNTSNFGNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12579; Mature: 12447
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFGIVVPRGIQRLQLQLPEILEDADNSLPSLFRAQLSLLHHHMTYLFDIVAAPDQHIE CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH QCYRGGGSPTIGQDRLPGWGQSTAKMHYVSKIPGIGPITATVLIAAIGNTSNFGNS HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AEFGIVVPRGIQRLQLQLPEILEDADNSLPSLFRAQLSLLHHHMTYLFDIVAAPDQHIE CCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH QCYRGGGSPTIGQDRLPGWGQSTAKMHYVSKIPGIGPITATVLIAAIGNTSNFGNS HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA