| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yceG [H]
Identifier: 238920256
GI number: 238920256
Start: 2267021
End: 2268049
Strand: Reverse
Name: yceG [H]
Synonym: NT01EI_2365
Alternate gene names: 238920256
Gene position: 2268049-2267021 (Counterclockwise)
Preceding gene: 238920257
Following gene: 238920255
Centisome position: 59.49
GC content: 60.93
Gene sequence:
>1029_bases ATGAAGAGAAAATGGATAGCCTGGATTGCGGCGTTGGTGCTGCTGTTGCTGGGCGCTATAGGTGTGATGGGGTATCACCA GGTGGAGCGCTTCGCCCGCACCCCTTTGCCCCTGAGCCAGGCGACGCTGTTTAAGCTGCCTTCCGGCAGCGGGCGGGATA AGCTGCAGGCGCTGTTGATCCGCGATCGCCTGATCCACAGTGGACGCTATTTGCCCTGGCTGCTGCAGCTGGAGCCGGAT CTGGCGCAGTTTAAGGCCGGTACCTATCGGCTGACACCCGGGATGACGGTGCGCGACATGCTGGCGCTGTTCAGCAGCGG CCGAGAGGCGCAGTTTGACGTGCGCTTTATCGAGGGCACCCGTTTCAGCGATTGGCTGAAGGTGCTGGCCGATGCCCCAC AGGTGCGGCAGACGCTGCGTGGGGAGAGCGAGGCGCAAATCGCCCAACGACTGGGGATCACGGCGGGGCAGTCTCTGGAA GGGGGGTTATACCCCGACACCTACCGCTATACCGCCGGTACCAGCGATCTGATGTTGCTGAAGCGCGCACACGCCCGGAT GGAACAAGAGGTGGCACAGCAGTGGGCGCAGCGTGACGTCGCGCTACCCTATAAAACTCCGCAGCAGATGGTCACCATGG CCTCAATCATAGAGAAAGAGACCGGGCTGGGCGAGGAGCGTCCCAAGGTGGCTTCGGTATTCATCAACCGCCTGCGGATC GGGATGCGTCTGCAAACCGATCCGACCGTGATCTATGGCCTGGGAGATGCCTATAATGGCAACCTGACGCGGCGTGACCT ACAGCAGCCGACGCCCTATAACACCTACGTTATCGCCGGTCTGCCACCGACGCCCATCGCCATGCCGGGCAAGGCATCTC TGGATGCGGCGGCTCACCCGGCCAAAACGCCCTATCTCTATTTTGTGGCGGACGGTAAGGGAGGGCATGTATTCAGTACC AACCTGCAGAGCCATAATCAGGCGGTGCGGGCCTATCTGCAGGCATTGAGGGATAAGAATGGAAAGTAA
Upstream 100 bases:
>100_bases GCGCCGGGTGGCAACGCAGGTTTTCAGCGATCGCACGCTGTATCAATTTTTATTACCGCACTGCCTGCAGGTTGAGGCAT AGCGGTGTGATGGCGGTTGA
Downstream 100 bases:
>100_bases GTTCATCGTGATTGAGGGGTTGGAGGGCGCCGGTAAGACGACTGCGCGCGACGTGGTGGTGGATGAGCTGCGCCGTCACG GCATTCCGGAGGTGGTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKRKWIAWIAALVLLLLGAIGVMGYHQVERFARTPLPLSQATLFKLPSGSGRDKLQALLIRDRLIHSGRYLPWLLQLEPD LAQFKAGTYRLTPGMTVRDMLALFSSGREAQFDVRFIEGTRFSDWLKVLADAPQVRQTLRGESEAQIAQRLGITAGQSLE GGLYPDTYRYTAGTSDLMLLKRAHARMEQEVAQQWAQRDVALPYKTPQQMVTMASIIEKETGLGEERPKVASVFINRLRI GMRLQTDPTVIYGLGDAYNGNLTRRDLQQPTPYNTYVIAGLPPTPIAMPGKASLDAAAHPAKTPYLYFVADGKGGHVFST NLQSHNQAVRAYLQALRDKNGK
Sequences:
>Translated_342_residues MKRKWIAWIAALVLLLLGAIGVMGYHQVERFARTPLPLSQATLFKLPSGSGRDKLQALLIRDRLIHSGRYLPWLLQLEPD LAQFKAGTYRLTPGMTVRDMLALFSSGREAQFDVRFIEGTRFSDWLKVLADAPQVRQTLRGESEAQIAQRLGITAGQSLE GGLYPDTYRYTAGTSDLMLLKRAHARMEQEVAQQWAQRDVALPYKTPQQMVTMASIIEKETGLGEERPKVASVFINRLRI GMRLQTDPTVIYGLGDAYNGNLTRRDLQQPTPYNTYVIAGLPPTPIAMPGKASLDAAAHPAKTPYLYFVADGKGGHVFST NLQSHNQAVRAYLQALRDKNGK >Mature_342_residues MKRKWIAWIAALVLLLLGAIGVMGYHQVERFARTPLPLSQATLFKLPSGSGRDKLQALLIRDRLIHSGRYLPWLLQLEPD LAQFKAGTYRLTPGMTVRDMLALFSSGREAQFDVRFIEGTRFSDWLKVLADAPQVRQTLRGESEAQIAQRLGITAGQSLE GGLYPDTYRYTAGTSDLMLLKRAHARMEQEVAQQWAQRDVALPYKTPQQMVTMASIIEKETGLGEERPKVASVFINRLRI GMRLQTDPTVIYGLGDAYNGNLTRRDLQQPTPYNTYVIAGLPPTPIAMPGKASLDAAAHPAKTPYLYFVADGKGGHVFST NLQSHNQAVRAYLQALRDKNGK
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=325, Percent_Identity=56.6153846153846, Blast_Score=376, Evalue=1e-106,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38124; Mature: 38124
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKWIAWIAALVLLLLGAIGVMGYHQVERFARTPLPLSQATLFKLPSGSGRDKLQALLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCHHHHHHHHH RDRLIHSGRYLPWLLQLEPDLAQFKAGTYRLTPGMTVRDMLALFSSGREAQFDVRFIEGT HHHHHHCCCCCEEEEEECCCHHHHCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEECCC RFSDWLKVLADAPQVRQTLRGESEAQIAQRLGITAGQSLEGGLYPDTYRYTAGTSDLMLL CHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHH KRAHARMEQEVAQQWAQRDVALPYKTPQQMVTMASIIEKETGLGEERPKVASVFINRLRI HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH GMRLQTDPTVIYGLGDAYNGNLTRRDLQQPTPYNTYVIAGLPPTPIAMPGKASLDAAAHP CEEEECCCEEEEECCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC AKTPYLYFVADGKGGHVFSTNLQSHNQAVRAYLQALRDKNGK CCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRKWIAWIAALVLLLLGAIGVMGYHQVERFARTPLPLSQATLFKLPSGSGRDKLQALLI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCHHHHHHHHH RDRLIHSGRYLPWLLQLEPDLAQFKAGTYRLTPGMTVRDMLALFSSGREAQFDVRFIEGT HHHHHHCCCCCEEEEEECCCHHHHCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEECCC RFSDWLKVLADAPQVRQTLRGESEAQIAQRLGITAGQSLEGGLYPDTYRYTAGTSDLMLL CHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHH KRAHARMEQEVAQQWAQRDVALPYKTPQQMVTMASIIEKETGLGEERPKVASVFINRLRI HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH GMRLQTDPTVIYGLGDAYNGNLTRRDLQQPTPYNTYVIAGLPPTPIAMPGKASLDAAAHP CEEEECCCEEEEECCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC AKTPYLYFVADGKGGHVFSTNLQSHNQAVRAYLQALRDKNGK CCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 1644759; 8631667 [H]