| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is ptsG [H]
Identifier: 238920252
GI number: 238920252
Start: 2262849
End: 2264282
Strand: Reverse
Name: ptsG [H]
Synonym: NT01EI_2361
Alternate gene names: 238920252
Gene position: 2264282-2262849 (Counterclockwise)
Preceding gene: 238920253
Following gene: 238920250
Centisome position: 59.39
GC content: 58.58
Gene sequence:
>1434_bases ATGTTTAAAAACGCATTTGCCAACCTGCAAAAGGTTGGTAAGTCACTGATGCTGCCCGTATCAGTCCTACCTATCGCAGG CATACTGCTCGGCGTCGGATCGGCAAACTTTAGTTGGCTTCCCGCGGTGGTTTCCCATGTGATGGCTGAGGCCGGTGGCT CGGTATTTGCCAATATGCCGCTGATCTTTGCCATCGGCGTGGCGTTGGGATTTACCAATAATGACGGGGTATCAGCCCTG GCCGCCGTGGTTGCCTATGGCATCATGGTGAAAACCATGGCCGTGGTGGCACCGCTGGTGCTGCATCTGCCCTCGGAAGA GATTGCCGCCAAGCATCTGGCGGATACCGGGGTGCTCGGCGGGATCATCGCCGGTTCTATCGCCGCCTATATGTTTAACC GCTTCTACCGCATCAAACTGCCGGAATATCTGGGCTTCTTTGCCGGTAAACGCTTTGTGCCGATTATCTCCGGCCTGGCA GCGATTGCGCTGGGCGTGGTGCTCTCCTTCATTTGGCCGCCGGTTGGCTCCGCCATTCAGCATTTTTCCCAGTGGGCCGC CTATCAGAACCCGGTGGTCGCATTCGGCATCTATGGTCTGGTAGAGCGTGCACTGGTGCCATTTGGCCTGCACCATATCT GGAACGTACCGTTCCAGATGCAGATCGGTGAGTATGTGAATGCGGCGGGACAGGTGTTCCACGGCGATATTCCGCGCTAT ATGGCCGGCGATCCGACGGCGGGTAAACTCTCCGGTGGCTTCCTGTTCAAAATGTATGGCCTGCCGGCGGCGGCGATCGC CATCTGGCATTCGGCGAAGCCGGAAAACCGTACCAAGGTGGCCGGGATCATGATCTCCGCGGCGCTGACCTCATTCCTGA CCGGGATCACCGAGCCTATCGAGTTTGCCTTTATGTTCGTGGCGCCGATCCTGTATGTGATCCACGCGATTCTGGCCGGT CTGGCGTTCCCGATCTGTATCCTGCTGGGGATGCGCGACGGAACCAGCTTCTCACATGGCCTGATCGATTTTATCGTTCT GAGCGGCAACGGCAGCAAGCTGTGGCTGTTCCCGATCGTCGGCCTGTGCTACGCGCTGCTGTACTACGTGATCTTCCGCG TGCTGATCGTCAAGCTGAACCTGAAGACGCCGGGCCGCGAGGAGAGCAGCAGCGAGCAGAGCGCGCAGAGCGGCAACGAC ATGGCTGCGTCGCTGGTACAGGCATTTGGCGGTAAGGAAAATATTACCAACCTGGACGCCTGTATTACCCGCCTGCGCGT CAGCGTCGCCGATGTCGCCAGGGTGGATCAGGCCGGGCTTAAGAAGCTGGGCGCTGCCGGGGTGGTGGTGGCGGGCTCTG GGGTGCAGGCCATCTTTGGTACCAAGTCCGATAACCTGAAGACCGAAATGGACGACTATATTCGCAGCCATTGA
Upstream 100 bases:
>100_bases GGTGCATAGACACCCGACGTCCGGGGCTCTCTTCCCTGCGGCGGTGCGCTGTTTCCGGCGCGGATAAAAAGAGCATTTTT ACTCAGGAGCACACTCAATT
Downstream 100 bases:
>100_bases TGCAAGTGCGTGATACGCCTTTGACAGGGTGGTTACGTTAGTTCGCCCCCGTTTTTACGGGGGTTAATGAGATGGTCACC CCCCCACCCTGTGAGCGGTA
Product: PTS system glucose-specific transporter subunits IIBC
Products: NA
Alternate protein names: EIICB-Glc; EII-Glc; Glucose permease IIC component; PTS system glucose-specific EIIC component; Glucose-specific phosphotransferase enzyme IIB component; PTS system glucose-specific EIIB component [H]
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSAL AAVVAYGIMVKTMAVVAPLVLHLPSEEIAAKHLADTGVLGGIIAGSIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA AIALGVVLSFIWPPVGSAIQHFSQWAAYQNPVVAFGIYGLVERALVPFGLHHIWNVPFQMQIGEYVNAAGQVFHGDIPRY MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRTKVAGIMISAALTSFLTGITEPIEFAFMFVAPILYVIHAILAG LAFPICILLGMRDGTSFSHGLIDFIVLSGNGSKLWLFPIVGLCYALLYYVIFRVLIVKLNLKTPGREESSSEQSAQSGND MAASLVQAFGGKENITNLDACITRLRVSVADVARVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDDYIRSH
Sequences:
>Translated_477_residues MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSAL AAVVAYGIMVKTMAVVAPLVLHLPSEEIAAKHLADTGVLGGIIAGSIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA AIALGVVLSFIWPPVGSAIQHFSQWAAYQNPVVAFGIYGLVERALVPFGLHHIWNVPFQMQIGEYVNAAGQVFHGDIPRY MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRTKVAGIMISAALTSFLTGITEPIEFAFMFVAPILYVIHAILAG LAFPICILLGMRDGTSFSHGLIDFIVLSGNGSKLWLFPIVGLCYALLYYVIFRVLIVKLNLKTPGREESSSEQSAQSGND MAASLVQAFGGKENITNLDACITRLRVSVADVARVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDDYIRSH >Mature_477_residues MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSAL AAVVAYGIMVKTMAVVAPLVLHLPSEEIAAKHLADTGVLGGIIAGSIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA AIALGVVLSFIWPPVGSAIQHFSQWAAYQNPVVAFGIYGLVERALVPFGLHHIWNVPFQMQIGEYVNAAGQVFHGDIPRY MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRTKVAGIMISAALTSFLTGITEPIEFAFMFVAPILYVIHAILAG LAFPICILLGMRDGTSFSHGLIDFIVLSGNGSKLWLFPIVGLCYALLYYVIFRVLIVKLNLKTPGREESSSEQSAQSGND MAASLVQAFGGKENITNLDACITRLRVSVADVARVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDDYIRSH
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787343, Length=477, Percent_Identity=90.7756813417191, Blast_Score=882, Evalue=0.0, Organism=Escherichia coli, GI1786894, Length=485, Percent_Identity=39.5876288659794, Blast_Score=326, Evalue=2e-90, Organism=Escherichia coli, GI1787908, Length=514, Percent_Identity=36.9649805447471, Blast_Score=271, Evalue=9e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011299 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 50670; Mature: 50670
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMP CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEECCCH LIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPSEEIAAKHLADTGVLG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GIIAGSIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIALGVVLSFIWPPVGSAIQ HHHHHHHHHHHHHHHHEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH HFSQWAAYQNPVVAFGIYGLVERALVPFGLHHIWNVPFQMQIGEYVNAAGQVFHGDIPRY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCHHHCCCCCCH MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRTKVAGIMISAALTSFLTGITEPI HCCCCCCCCCCCCCEEHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH EFAFMFVAPILYVIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNGSKLWLFPIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEHHHHH GLCYALLYYVIFRVLIVKLNLKTPGREESSSEQSAQSGNDMAASLVQAFGGKENITNLDA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCHHHH CITRLRVSVADVARVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDDYIRSH HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHCC >Mature Secondary Structure MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVVSHVMAEAGGSVFANMP CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEECCCH LIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPSEEIAAKHLADTGVLG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GIIAGSIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLAAIALGVVLSFIWPPVGSAIQ HHHHHHHHHHHHHHHHEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH HFSQWAAYQNPVVAFGIYGLVERALVPFGLHHIWNVPFQMQIGEYVNAAGQVFHGDIPRY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCHHHCCCCCCH MAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRTKVAGIMISAALTSFLTGITEPI HCCCCCCCCCCCCCEEHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH EFAFMFVAPILYVIHAILAGLAFPICILLGMRDGTSFSHGLIDFIVLSGNGSKLWLFPIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEHHHHH GLCYALLYYVIFRVLIVKLNLKTPGREESSSEQSAQSGNDMAASLVQAFGGKENITNLDA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCHHHH CITRLRVSVADVARVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTEMDDYIRSH HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]