| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920200
Identifier: 238920200
GI number: 238920200
Start: 2205197
End: 2206561
Strand: Direct
Name: 238920200
Synonym: NT01EI_2309
Alternate gene names: NA
Gene position: 2205197-2206561 (Clockwise)
Preceding gene: 238920199
Following gene: 238920202
Centisome position: 57.84
GC content: 36.26
Gene sequence:
>1365_bases ATGTCGATAAATGCTATGAGTAATCATGACTTTTATACCTTGTTAAATCAAGTCGTACGTCCGGCGGCACCCGTATCTAC TTTTGAACTTCTCTTCGGTAGAGAAAAACAACTTGGCGCAATCGAGTCGGTTTTATATTCTGATGGTCGAAGCGTATTTA TTTATGGGGATCGCGGCGTTGGCAAAACATCTTTAGCACATACAATTGCGTATAAGCTACAAGAAGAAAACGAACCTATT TTTGTAGGTTGCGAACCATCTTCAACTTTAGCATCAATAATTAATGATATTGTAGTAAAAACAAAGCCATGCAAAAACTA TAAAAATGAGAGATCCATATCCGCCGGAATAAATCTACTTGGATTCAAACTAGATACAACCGTAAAAAAAACAGATGAAA GATCCCAATTAAATATCAATTCAATATCTTCAGCAGTCCTAGCCTTGGAAGACCTGACAAAAATACACTCTCAAAAACCT TTCATTGTGATTGATGAGTTTGACCAGATAGAATCACAACATGAAAAGCAAAATTTCGGACGACTAGTAAAAGCATTAGG TGATCAGAACATCAATGTGAAATTAATATTTACTGGAATTAGTGATTCATTACACTCCCTGATTGGCGGGCACCTTTCCA GTGAAAGACAAATTCATCAAACTCATTTAGAAGCATTACCTTGGAATGGAAGATTTAAAATAATAGATAATGCTTTCGGT GCTTTTGAATTGAAAGTAGATGATAACATAAGACATAAAATAGCGGGATTGAGTGATGGGTTCCCCCATTACGTACATTT ATTATGTGAAAAAATTCTAACCTGTGCTCATGCAAAAAGTGAAAATATTGAAATAATTGATCACGACATTTTTTGGGAAG GTTTAAATGATGCTGTTGATTCAATATCTGAGACATTAAAGCATGACTATGTTCTTGCTACACTAGGGAGGCAAGAATAC TTTCACCATTTGCTATGGGCTATGGCTGATGCTGAGGACTTACAGCGCGAGAAAAAGACAATAAAGCATTCATATAGTGA AATATGCAACCAAAAGCAATTAAATGCACTTTCTGAAAGCCAATTTGACAGGCAATTTAATAAACTAAAATCCCCCGAAT TTGGAGAAGTGATAGTAAATGCTTTCGAGGGACGGAAGGGTTGGTTTAAATTCAAAGAAAACATGATTAGAGGGTATGTT CGCATGCTCGCTGAAAATAATGGTGTATCTCTTGACTTCCAAAGACGCTTCACCGCTAGGGAGCCAACTGCCCGACACGT TGGGGTAAAGACTTCAACATACAAGCCATTAACTACTGTTGAAGAAAGGGCATATAGAATACAAAGAACAAAAAAGAAAA ATTAA
Upstream 100 bases:
>100_bases GAACAAGCAATTTGCAACATCGTCAATAATCTAAATGATGTTAAATCAACCAATTAGGGATAGAATAGATAAAAGTTACG TAATCGAGGAGAATTTCAAA
Downstream 100 bases:
>100_bases ACAACATTTCCGTATTTAGTGAATAACTGATTAGCTGTTAAATACCTCTAATCAGTAAAGCCTAGTACAAGACTGAATAG CTGCACTTACTTGACCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: AAA ATPase; ATPase; ATPase Family Protein
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MSINAMSNHDFYTLLNQVVRPAAPVSTFELLFGREKQLGAIESVLYSDGRSVFIYGDRGVGKTSLAHTIAYKLQEENEPI FVGCEPSSTLASIINDIVVKTKPCKNYKNERSISAGINLLGFKLDTTVKKTDERSQLNINSISSAVLALEDLTKIHSQKP FIVIDEFDQIESQHEKQNFGRLVKALGDQNINVKLIFTGISDSLHSLIGGHLSSERQIHQTHLEALPWNGRFKIIDNAFG AFELKVDDNIRHKIAGLSDGFPHYVHLLCEKILTCAHAKSENIEIIDHDIFWEGLNDAVDSISETLKHDYVLATLGRQEY FHHLLWAMADAEDLQREKKTIKHSYSEICNQKQLNALSESQFDRQFNKLKSPEFGEVIVNAFEGRKGWFKFKENMIRGYV RMLAENNGVSLDFQRRFTAREPTARHVGVKTSTYKPLTTVEERAYRIQRTKKKN
Sequences:
>Translated_454_residues MSINAMSNHDFYTLLNQVVRPAAPVSTFELLFGREKQLGAIESVLYSDGRSVFIYGDRGVGKTSLAHTIAYKLQEENEPI FVGCEPSSTLASIINDIVVKTKPCKNYKNERSISAGINLLGFKLDTTVKKTDERSQLNINSISSAVLALEDLTKIHSQKP FIVIDEFDQIESQHEKQNFGRLVKALGDQNINVKLIFTGISDSLHSLIGGHLSSERQIHQTHLEALPWNGRFKIIDNAFG AFELKVDDNIRHKIAGLSDGFPHYVHLLCEKILTCAHAKSENIEIIDHDIFWEGLNDAVDSISETLKHDYVLATLGRQEY FHHLLWAMADAEDLQREKKTIKHSYSEICNQKQLNALSESQFDRQFNKLKSPEFGEVIVNAFEGRKGWFKFKENMIRGYV RMLAENNGVSLDFQRRFTAREPTARHVGVKTSTYKPLTTVEERAYRIQRTKKKN >Mature_453_residues SINAMSNHDFYTLLNQVVRPAAPVSTFELLFGREKQLGAIESVLYSDGRSVFIYGDRGVGKTSLAHTIAYKLQEENEPIF VGCEPSSTLASIINDIVVKTKPCKNYKNERSISAGINLLGFKLDTTVKKTDERSQLNINSISSAVLALEDLTKIHSQKPF IVIDEFDQIESQHEKQNFGRLVKALGDQNINVKLIFTGISDSLHSLIGGHLSSERQIHQTHLEALPWNGRFKIIDNAFGA FELKVDDNIRHKIAGLSDGFPHYVHLLCEKILTCAHAKSENIEIIDHDIFWEGLNDAVDSISETLKHDYVLATLGRQEYF HHLLWAMADAEDLQREKKTIKHSYSEICNQKQLNALSESQFDRQFNKLKSPEFGEVIVNAFEGRKGWFKFKENMIRGYVR MLAENNGVSLDFQRRFTAREPTARHVGVKTSTYKPLTTVEERAYRIQRTKKKN
Specific function: Unknown
COG id: COG1672
COG function: function code R; Predicted ATPase (AAA+ superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51658; Mature: 51527
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINAMSNHDFYTLLNQVVRPAAPVSTFELLFGREKQLGAIESVLYSDGRSVFIYGDRGV CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCC GKTSLAHTIAYKLQEENEPIFVGCEPSSTLASIINDIVVKTKPCKNYKNERSISAGINLL CHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEE GFKLDTTVKKTDERSQLNINSISSAVLALEDLTKIHSQKPFIVIDEFDQIESQHEKQNFG EEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH RLVKALGDQNINVKLIFTGISDSLHSLIGGHLSSERQIHQTHLEALPWNGRFKIIDNAFG HHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCC AFELKVDDNIRHKIAGLSDGFPHYVHLLCEKILTCAHAKSENIEIIDHDIFWEGLNDAVD EEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHCCHHHHHH SISETLKHDYVLATLGRQEYFHHLLWAMADAEDLQREKKTIKHSYSEICNQKQLNALSES HHHHHHHHCHHEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH QFDRQFNKLKSPEFGEVIVNAFEGRKGWFKFKENMIRGYVRMLAENNGVSLDFQRRFTAR HHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCC EPTARHVGVKTSTYKPLTTVEERAYRIQRTKKKN CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SINAMSNHDFYTLLNQVVRPAAPVSTFELLFGREKQLGAIESVLYSDGRSVFIYGDRGV CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCC GKTSLAHTIAYKLQEENEPIFVGCEPSSTLASIINDIVVKTKPCKNYKNERSISAGINLL CHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEE GFKLDTTVKKTDERSQLNINSISSAVLALEDLTKIHSQKPFIVIDEFDQIESQHEKQNFG EEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH RLVKALGDQNINVKLIFTGISDSLHSLIGGHLSSERQIHQTHLEALPWNGRFKIIDNAFG HHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCC AFELKVDDNIRHKIAGLSDGFPHYVHLLCEKILTCAHAKSENIEIIDHDIFWEGLNDAVD EEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHCCHHHHHH SISETLKHDYVLATLGRQEYFHHLLWAMADAEDLQREKKTIKHSYSEICNQKQLNALSES HHHHHHHHCHHEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH QFDRQFNKLKSPEFGEVIVNAFEGRKGWFKFKENMIRGYVRMLAENNGVSLDFQRRFTAR HHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCC EPTARHVGVKTSTYKPLTTVEERAYRIQRTKKKN CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA