Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238920200

Identifier: 238920200

GI number: 238920200

Start: 2205197

End: 2206561

Strand: Direct

Name: 238920200

Synonym: NT01EI_2309

Alternate gene names: NA

Gene position: 2205197-2206561 (Clockwise)

Preceding gene: 238920199

Following gene: 238920202

Centisome position: 57.84

GC content: 36.26

Gene sequence:

>1365_bases
ATGTCGATAAATGCTATGAGTAATCATGACTTTTATACCTTGTTAAATCAAGTCGTACGTCCGGCGGCACCCGTATCTAC
TTTTGAACTTCTCTTCGGTAGAGAAAAACAACTTGGCGCAATCGAGTCGGTTTTATATTCTGATGGTCGAAGCGTATTTA
TTTATGGGGATCGCGGCGTTGGCAAAACATCTTTAGCACATACAATTGCGTATAAGCTACAAGAAGAAAACGAACCTATT
TTTGTAGGTTGCGAACCATCTTCAACTTTAGCATCAATAATTAATGATATTGTAGTAAAAACAAAGCCATGCAAAAACTA
TAAAAATGAGAGATCCATATCCGCCGGAATAAATCTACTTGGATTCAAACTAGATACAACCGTAAAAAAAACAGATGAAA
GATCCCAATTAAATATCAATTCAATATCTTCAGCAGTCCTAGCCTTGGAAGACCTGACAAAAATACACTCTCAAAAACCT
TTCATTGTGATTGATGAGTTTGACCAGATAGAATCACAACATGAAAAGCAAAATTTCGGACGACTAGTAAAAGCATTAGG
TGATCAGAACATCAATGTGAAATTAATATTTACTGGAATTAGTGATTCATTACACTCCCTGATTGGCGGGCACCTTTCCA
GTGAAAGACAAATTCATCAAACTCATTTAGAAGCATTACCTTGGAATGGAAGATTTAAAATAATAGATAATGCTTTCGGT
GCTTTTGAATTGAAAGTAGATGATAACATAAGACATAAAATAGCGGGATTGAGTGATGGGTTCCCCCATTACGTACATTT
ATTATGTGAAAAAATTCTAACCTGTGCTCATGCAAAAAGTGAAAATATTGAAATAATTGATCACGACATTTTTTGGGAAG
GTTTAAATGATGCTGTTGATTCAATATCTGAGACATTAAAGCATGACTATGTTCTTGCTACACTAGGGAGGCAAGAATAC
TTTCACCATTTGCTATGGGCTATGGCTGATGCTGAGGACTTACAGCGCGAGAAAAAGACAATAAAGCATTCATATAGTGA
AATATGCAACCAAAAGCAATTAAATGCACTTTCTGAAAGCCAATTTGACAGGCAATTTAATAAACTAAAATCCCCCGAAT
TTGGAGAAGTGATAGTAAATGCTTTCGAGGGACGGAAGGGTTGGTTTAAATTCAAAGAAAACATGATTAGAGGGTATGTT
CGCATGCTCGCTGAAAATAATGGTGTATCTCTTGACTTCCAAAGACGCTTCACCGCTAGGGAGCCAACTGCCCGACACGT
TGGGGTAAAGACTTCAACATACAAGCCATTAACTACTGTTGAAGAAAGGGCATATAGAATACAAAGAACAAAAAAGAAAA
ATTAA

Upstream 100 bases:

>100_bases
GAACAAGCAATTTGCAACATCGTCAATAATCTAAATGATGTTAAATCAACCAATTAGGGATAGAATAGATAAAAGTTACG
TAATCGAGGAGAATTTCAAA

Downstream 100 bases:

>100_bases
ACAACATTTCCGTATTTAGTGAATAACTGATTAGCTGTTAAATACCTCTAATCAGTAAAGCCTAGTACAAGACTGAATAG
CTGCACTTACTTGACCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: AAA ATPase; ATPase; ATPase Family Protein

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSINAMSNHDFYTLLNQVVRPAAPVSTFELLFGREKQLGAIESVLYSDGRSVFIYGDRGVGKTSLAHTIAYKLQEENEPI
FVGCEPSSTLASIINDIVVKTKPCKNYKNERSISAGINLLGFKLDTTVKKTDERSQLNINSISSAVLALEDLTKIHSQKP
FIVIDEFDQIESQHEKQNFGRLVKALGDQNINVKLIFTGISDSLHSLIGGHLSSERQIHQTHLEALPWNGRFKIIDNAFG
AFELKVDDNIRHKIAGLSDGFPHYVHLLCEKILTCAHAKSENIEIIDHDIFWEGLNDAVDSISETLKHDYVLATLGRQEY
FHHLLWAMADAEDLQREKKTIKHSYSEICNQKQLNALSESQFDRQFNKLKSPEFGEVIVNAFEGRKGWFKFKENMIRGYV
RMLAENNGVSLDFQRRFTAREPTARHVGVKTSTYKPLTTVEERAYRIQRTKKKN

Sequences:

>Translated_454_residues
MSINAMSNHDFYTLLNQVVRPAAPVSTFELLFGREKQLGAIESVLYSDGRSVFIYGDRGVGKTSLAHTIAYKLQEENEPI
FVGCEPSSTLASIINDIVVKTKPCKNYKNERSISAGINLLGFKLDTTVKKTDERSQLNINSISSAVLALEDLTKIHSQKP
FIVIDEFDQIESQHEKQNFGRLVKALGDQNINVKLIFTGISDSLHSLIGGHLSSERQIHQTHLEALPWNGRFKIIDNAFG
AFELKVDDNIRHKIAGLSDGFPHYVHLLCEKILTCAHAKSENIEIIDHDIFWEGLNDAVDSISETLKHDYVLATLGRQEY
FHHLLWAMADAEDLQREKKTIKHSYSEICNQKQLNALSESQFDRQFNKLKSPEFGEVIVNAFEGRKGWFKFKENMIRGYV
RMLAENNGVSLDFQRRFTAREPTARHVGVKTSTYKPLTTVEERAYRIQRTKKKN
>Mature_453_residues
SINAMSNHDFYTLLNQVVRPAAPVSTFELLFGREKQLGAIESVLYSDGRSVFIYGDRGVGKTSLAHTIAYKLQEENEPIF
VGCEPSSTLASIINDIVVKTKPCKNYKNERSISAGINLLGFKLDTTVKKTDERSQLNINSISSAVLALEDLTKIHSQKPF
IVIDEFDQIESQHEKQNFGRLVKALGDQNINVKLIFTGISDSLHSLIGGHLSSERQIHQTHLEALPWNGRFKIIDNAFGA
FELKVDDNIRHKIAGLSDGFPHYVHLLCEKILTCAHAKSENIEIIDHDIFWEGLNDAVDSISETLKHDYVLATLGRQEYF
HHLLWAMADAEDLQREKKTIKHSYSEICNQKQLNALSESQFDRQFNKLKSPEFGEVIVNAFEGRKGWFKFKENMIRGYVR
MLAENNGVSLDFQRRFTAREPTARHVGVKTSTYKPLTTVEERAYRIQRTKKKN

Specific function: Unknown

COG id: COG1672

COG function: function code R; Predicted ATPase (AAA+ superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51658; Mature: 51527

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINAMSNHDFYTLLNQVVRPAAPVSTFELLFGREKQLGAIESVLYSDGRSVFIYGDRGV
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCC
GKTSLAHTIAYKLQEENEPIFVGCEPSSTLASIINDIVVKTKPCKNYKNERSISAGINLL
CHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEE
GFKLDTTVKKTDERSQLNINSISSAVLALEDLTKIHSQKPFIVIDEFDQIESQHEKQNFG
EEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH
RLVKALGDQNINVKLIFTGISDSLHSLIGGHLSSERQIHQTHLEALPWNGRFKIIDNAFG
HHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCC
AFELKVDDNIRHKIAGLSDGFPHYVHLLCEKILTCAHAKSENIEIIDHDIFWEGLNDAVD
EEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHCCHHHHHH
SISETLKHDYVLATLGRQEYFHHLLWAMADAEDLQREKKTIKHSYSEICNQKQLNALSES
HHHHHHHHCHHEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
QFDRQFNKLKSPEFGEVIVNAFEGRKGWFKFKENMIRGYVRMLAENNGVSLDFQRRFTAR
HHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCC
EPTARHVGVKTSTYKPLTTVEERAYRIQRTKKKN
CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SINAMSNHDFYTLLNQVVRPAAPVSTFELLFGREKQLGAIESVLYSDGRSVFIYGDRGV
CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCC
GKTSLAHTIAYKLQEENEPIFVGCEPSSTLASIINDIVVKTKPCKNYKNERSISAGINLL
CHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEE
GFKLDTTVKKTDERSQLNINSISSAVLALEDLTKIHSQKPFIVIDEFDQIESQHEKQNFG
EEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH
RLVKALGDQNINVKLIFTGISDSLHSLIGGHLSSERQIHQTHLEALPWNGRFKIIDNAFG
HHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCC
AFELKVDDNIRHKIAGLSDGFPHYVHLLCEKILTCAHAKSENIEIIDHDIFWEGLNDAVD
EEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHCCHHHHHH
SISETLKHDYVLATLGRQEYFHHLLWAMADAEDLQREKKTIKHSYSEICNQKQLNALSES
HHHHHHHHCHHEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
QFDRQFNKLKSPEFGEVIVNAFEGRKGWFKFKENMIRGYVRMLAENNGVSLDFQRRFTAR
HHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHCCCCC
EPTARHVGVKTSTYKPLTTVEERAYRIQRTKKKN
CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA