| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920189
Identifier: 238920189
GI number: 238920189
Start: 2196298
End: 2196462
Strand: Reverse
Name: 238920189
Synonym: NT01EI_2298
Alternate gene names: NA
Gene position: 2196462-2196298 (Counterclockwise)
Preceding gene: 238920190
Following gene: 238920187
Centisome position: 57.61
GC content: 40.61
Gene sequence:
>165_bases TTGCTGGTGGCACATTACCTTTATGGCATTTCAAAACGGAAGATTGCCAAGGTGCGTAAAAAAGATGAAAAGCTGATTCG CATCGAAATACAGATGGCTGAGGGGTTTATTGATGGGTGTTTGTCTATGCTGGATGTTTGCTTAGAAATGGATGGGATAG TATAA
Upstream 100 bases:
>100_bases TCAATCGGGGAAAATGAGGCTGTCATGTACGGATGATGATGGCCTTATCATTGAGGGATGTCTGGCCCAGTTAAAGAAAC GAAAGCCATATGAGCATTCT
Downstream 100 bases:
>100_bases AATATTTAAAACTCCCCCCCGTTGGGCTGGGGGGCTGGCTTGTGGTTATCAGTTATACGGCATACGTTTCTGCCTGAGTA TCATAGCGAGTCCATACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Antitermination Protein Q; Antitermination Protein Q Phage Origin; Phage Antiterminator; Phage Antitermination Protein; Antitermination Q Family Protein
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MLVAHYLYGISKRKIAKVRKKDEKLIRIEIQMAEGFIDGCLSMLDVCLEMDGIV
Sequences:
>Translated_54_residues MLVAHYLYGISKRKIAKVRKKDEKLIRIEIQMAEGFIDGCLSMLDVCLEMDGIV >Mature_54_residues MLVAHYLYGISKRKIAKVRKKDEKLIRIEIQMAEGFIDGCLSMLDVCLEMDGIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6186; Mature: 6186
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVAHYLYGISKRKIAKVRKKDEKLIRIEIQMAEGFIDGCLSMLDVCLEMDGIV CCHHHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLVAHYLYGISKRKIAKVRKKDEKLIRIEIQMAEGFIDGCLSMLDVCLEMDGIV CCHHHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA