Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920161

Identifier: 238920161

GI number: 238920161

Start: 2172931

End: 2175126

Strand: Direct

Name: 238920161

Synonym: NT01EI_2267

Alternate gene names: NA

Gene position: 2172931-2175126 (Clockwise)

Preceding gene: 238920160

Following gene: 238920162

Centisome position: 57.0

GC content: 61.2

Gene sequence:

>2196_bases
ATGCAACGCCTGGAGCTGCTGCTTTCGCTCAATAACAAGCTGACCCGACCGCTGCGTGCGGCCGGCAGTCAGGTACAGGC
GTTTGCCGCCACCAGTCGTGCCGCATTCGGCCAAATCGCTATCGGCGGCGCGGCATTGTGGGGGGTGGGTCATGCCATCA
AAGGGGCGCTGCAGCCCGCCATCGAAATGGACAGGGCGCTGGGTGAGGTCAGGTCACTGGGGGTGGCGGAGAGCGGACTG
CGTAAACTGCAGCGCGCCTCCCTCGACTTCACCATGGCCTATGGTGGCAATGCCGCGGAGTTTGTACGCTCCTCCTACGA
TATCCAGTCCGCCATCGCGGGTCTGACCGATAACGAGCTGTCCCGATTTACGGCGGCCTCCGCCACCCTGGCCAGAGCCA
CCAAGTCGAGCAGTGCGACAATCACCGCCTACATGGGCACGATGTACGGCATTTTCGAGCAGCAGGCCAACGCCATGGGC
AGGGGCGCCTGGGTGGAGCAAATCGCCGGCCAGACGGCGACGGCGGTGCAGATGTTCAAAACCACCGGCGATCAGATGTC
TGCCGCATTCACCTCGCTGGGCGCCAGCGCCACCGCTGCCGGCGTCGATGTCGCCGAACAGTTCGCCGTGCTCGGCCAGC
TGCAGGCCACCATGAGCGGCAGCGAGGCCGGAACAAAGTACCGGGCGTTCCTGGCCGGCATCGGCGGTGCGCAGACAACC
CTGGGGCTGAATTTCACCCGCCGTGACGGCACCATGAAGGGCATCACCGAAATCATGCGCCTGATCCAGGGTAAATTTGG
CGATCTGTCCAAAGTTACCGACAGTGACCTACTGGCAAAGGCCTTTGGCTCCAAGCAGGCCGTCGCGATGGTCAAGTTGC
TCAATGCCAATATCGGTAATCTGGAAAAGAACATTACCACCCTGGGAAACAGCAGGGGGATGGGTAAGGCCGCCGAGATG
GCCGGGGCGATGGCCGATCCTTGGAAACAGAGTCTGGCCGTCATCAATGCCATGCGCATTGAGATCGGCACCCAGTTGCT
GCCGGTGCTCTATCCGTTTATCGATCAGGCCGTCAGCGGTGGCCGCGAGTTCATCAAATGGCTGCAGCTCTACCCCAACA
TTACCCGCGCCATCGGGCTGATGGCCGTCGCCATGCTGGCGCTGGCCGCCGCGGGTGCCGTCGTCAATATCACGCTGGGT
GTCATGCGATTTGTCGGTAGTGGCCTGAAAGCGGCCTTTACCGTGCTCGCCTGGGCATTTCGCCTTAATGCCATCGGCAC
CCTGATTTCCGCCAGCGCCACAAAAGTTTATGCCATGGCTCTGCGCCACCTGCGCGCCGGCATGCTTGCCTCGAGTATCG
CCGGCCGGGGACTGGCAGTCTCTATCGCCATGGTCACCTGGCCGATACTGCTGATCGGCGCCGCCATCGCAGGCGTCGTG
CTGCTGGTCTACAAATTTTGGCAGCCCATCAGGGCCTTTTTCTCGGGCTTCATTCAGGGATTTTCTGACGCCTGGGTCGA
GCTATCCAAGGGATCCCCCCTGTTCACCATAATGGCCAGGGGGATTGCCTGGGTGTGGTCCGGTGTAAAAACCCTCTTCG
GTTGGCTGTCAGGCCTGTTCACTCCCATCGCGCTGACCGGCGAACAGTTCAGCCGCGTCAGCCAGGCGGGCGCCTCATTT
GGCCGCATCGCTGCCGCTGCCGTCAGCGCCATTCTGGCACCGCTGGAGATGATAACCAACGCACTCGGATTGGTGTGGGA
TGCCATTGTCATCATTGGCCAGGGATGGATAGACATCTGGGAGGCCATCGATATCGAAAACCCCCTGCAGTCAATGAAGC
GTATCGCCGCAGGGATCCTGAACATTTTTGGCAACCTGTGGGCGCTGGTGAAATCCTCATTTTCCAGCGCCTATAACTGG
ATCATCGAAAAACTGAACCTGATCCCCGGCGTCAGCATAGAGATGCAGCCCATCCCCACACCCGACGCGCTGAATGGCAA
TGCCGGCGACGAGGCCACCCCACTGCTGACCGCAGGACAGGTGCAGAGCGCGGGGCCCGGCGGCATCGGCCAGCAGATCC
GCAACAGCAACAACAGCAAAACCGACATCGATCAGTCGGTTCGCACCACCACGTTTAACATCGCCAGTGCGTCTGCCGGC
GACATCAGGGAGCTTCAGGAACTCTATGCACGATAG

Upstream 100 bases:

>100_bases
GCAGAGTCTCGCCATGGCCGCCTGGCTGGATAACCACTACTGGGAGAGCCTGTGCGCCGCCGTCAATAACGGCATCGTGA
AAGCCTTTAAGGGGTAAGAC

Downstream 100 bases:

>100_bases
TCCAGCGCGCTATATCGACCTGCTGATCACCGACCGCAATTTCACCCTGAACAGCGGCCGGGAACCGGTGCTGTGCGATA
ACCTGCGCAGCATTGCCCAA

Product: phage tail tape measure protein, family

Products: NA

Alternate protein names: Phage Tail Tape Measure Protein Core Region; Tail Tape Measure Protein; Tail Length Determinator; Phage Tail Length Determinator; Tail Tape Measure Protein Bacteriophage Origin; Phage-Related Tail Protein; Phage Tail Tape Measure Core Region; Prophage; Phage-Like Protein; Phage Gene; Phage Tail Tape Measure Family Protein; Phage Tail Tape Measure Protein Family; Phage Tail Protein; Phage Tail Tape Measure Protein Core Region

Number of amino acids: Translated: 731; Mature: 731

Protein sequence:

>731_residues
MQRLELLLSLNNKLTRPLRAAGSQVQAFAATSRAAFGQIAIGGAALWGVGHAIKGALQPAIEMDRALGEVRSLGVAESGL
RKLQRASLDFTMAYGGNAAEFVRSSYDIQSAIAGLTDNELSRFTAASATLARATKSSSATITAYMGTMYGIFEQQANAMG
RGAWVEQIAGQTATAVQMFKTTGDQMSAAFTSLGASATAAGVDVAEQFAVLGQLQATMSGSEAGTKYRAFLAGIGGAQTT
LGLNFTRRDGTMKGITEIMRLIQGKFGDLSKVTDSDLLAKAFGSKQAVAMVKLLNANIGNLEKNITTLGNSRGMGKAAEM
AGAMADPWKQSLAVINAMRIEIGTQLLPVLYPFIDQAVSGGREFIKWLQLYPNITRAIGLMAVAMLALAAAGAVVNITLG
VMRFVGSGLKAAFTVLAWAFRLNAIGTLISASATKVYAMALRHLRAGMLASSIAGRGLAVSIAMVTWPILLIGAAIAGVV
LLVYKFWQPIRAFFSGFIQGFSDAWVELSKGSPLFTIMARGIAWVWSGVKTLFGWLSGLFTPIALTGEQFSRVSQAGASF
GRIAAAAVSAILAPLEMITNALGLVWDAIVIIGQGWIDIWEAIDIENPLQSMKRIAAGILNIFGNLWALVKSSFSSAYNW
IIEKLNLIPGVSIEMQPIPTPDALNGNAGDEATPLLTAGQVQSAGPGGIGQQIRNSNNSKTDIDQSVRTTTFNIASASAG
DIRELQELYAR

Sequences:

>Translated_731_residues
MQRLELLLSLNNKLTRPLRAAGSQVQAFAATSRAAFGQIAIGGAALWGVGHAIKGALQPAIEMDRALGEVRSLGVAESGL
RKLQRASLDFTMAYGGNAAEFVRSSYDIQSAIAGLTDNELSRFTAASATLARATKSSSATITAYMGTMYGIFEQQANAMG
RGAWVEQIAGQTATAVQMFKTTGDQMSAAFTSLGASATAAGVDVAEQFAVLGQLQATMSGSEAGTKYRAFLAGIGGAQTT
LGLNFTRRDGTMKGITEIMRLIQGKFGDLSKVTDSDLLAKAFGSKQAVAMVKLLNANIGNLEKNITTLGNSRGMGKAAEM
AGAMADPWKQSLAVINAMRIEIGTQLLPVLYPFIDQAVSGGREFIKWLQLYPNITRAIGLMAVAMLALAAAGAVVNITLG
VMRFVGSGLKAAFTVLAWAFRLNAIGTLISASATKVYAMALRHLRAGMLASSIAGRGLAVSIAMVTWPILLIGAAIAGVV
LLVYKFWQPIRAFFSGFIQGFSDAWVELSKGSPLFTIMARGIAWVWSGVKTLFGWLSGLFTPIALTGEQFSRVSQAGASF
GRIAAAAVSAILAPLEMITNALGLVWDAIVIIGQGWIDIWEAIDIENPLQSMKRIAAGILNIFGNLWALVKSSFSSAYNW
IIEKLNLIPGVSIEMQPIPTPDALNGNAGDEATPLLTAGQVQSAGPGGIGQQIRNSNNSKTDIDQSVRTTTFNIASASAG
DIRELQELYAR
>Mature_731_residues
MQRLELLLSLNNKLTRPLRAAGSQVQAFAATSRAAFGQIAIGGAALWGVGHAIKGALQPAIEMDRALGEVRSLGVAESGL
RKLQRASLDFTMAYGGNAAEFVRSSYDIQSAIAGLTDNELSRFTAASATLARATKSSSATITAYMGTMYGIFEQQANAMG
RGAWVEQIAGQTATAVQMFKTTGDQMSAAFTSLGASATAAGVDVAEQFAVLGQLQATMSGSEAGTKYRAFLAGIGGAQTT
LGLNFTRRDGTMKGITEIMRLIQGKFGDLSKVTDSDLLAKAFGSKQAVAMVKLLNANIGNLEKNITTLGNSRGMGKAAEM
AGAMADPWKQSLAVINAMRIEIGTQLLPVLYPFIDQAVSGGREFIKWLQLYPNITRAIGLMAVAMLALAAAGAVVNITLG
VMRFVGSGLKAAFTVLAWAFRLNAIGTLISASATKVYAMALRHLRAGMLASSIAGRGLAVSIAMVTWPILLIGAAIAGVV
LLVYKFWQPIRAFFSGFIQGFSDAWVELSKGSPLFTIMARGIAWVWSGVKTLFGWLSGLFTPIALTGEQFSRVSQAGASF
GRIAAAAVSAILAPLEMITNALGLVWDAIVIIGQGWIDIWEAIDIENPLQSMKRIAAGILNIFGNLWALVKSSFSSAYNW
IIEKLNLIPGVSIEMQPIPTPDALNGNAGDEATPLLTAGQVQSAGPGGIGQQIRNSNNSKTDIDQSVRTTTFNIASASAG
DIRELQELYAR

Specific function: Unknown

COG id: COG5283

COG function: function code S; Phage-related tail protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77049; Mature: 77049

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLELLLSLNNKLTRPLRAAGSQVQAFAATSRAAFGQIAIGGAALWGVGHAIKGALQPA
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHEECHHHHHHHHHHHHHHHHHH
IEMDRALGEVRSLGVAESGLRKLQRASLDFTMAYGGNAAEFVRSSYDIQSAIAGLTDNEL
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHH
SRFTAASATLARATKSSSATITAYMGTMYGIFEQQANAMGRGAWVEQIAGQTATAVQMFK
HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHH
TTGDQMSAAFTSLGASATAAGVDVAEQFAVLGQLQATMSGSEAGTKYRAFLAGIGGAQTT
HCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCE
LGLNFTRRDGTMKGITEIMRLIQGKFGDLSKVTDSDLLAKAFGSKQAVAMVKLLNANIGN
ECCEEECCCCCHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCC
LEKNITTLGNSRGMGKAAEMAGAMADPWKQSLAVINAMRIEIGTQLLPVLYPFIDQAVSG
HHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GREFIKWLQLYPNITRAIGLMAVAMLALAAAGAVVNITLGVMRFVGSGLKAAFTVLAWAF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RLNAIGTLISASATKVYAMALRHLRAGMLASSIAGRGLAVSIAMVTWPILLIGAAIAGVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLVYKFWQPIRAFFSGFIQGFSDAWVELSKGSPLFTIMARGIAWVWSGVKTLFGWLSGLF
HHHHHHHHHHHHHHHHHHHCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPIALTGEQFSRVSQAGASFGRIAAAAVSAILAPLEMITNALGLVWDAIVIIGQGWIDIW
HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EAIDIENPLQSMKRIAAGILNIFGNLWALVKSSFSSAYNWIIEKLNLIPGVSIEMQPIPT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
PDALNGNAGDEATPLLTAGQVQSAGPGGIGQQIRNSNNSKTDIDQSVRTTTFNIASASAG
CCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHEEEEECCCCCC
DIRELQELYAR
CHHHHHHHHCC
>Mature Secondary Structure
MQRLELLLSLNNKLTRPLRAAGSQVQAFAATSRAAFGQIAIGGAALWGVGHAIKGALQPA
CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHEECHHHHHHHHHHHHHHHHHH
IEMDRALGEVRSLGVAESGLRKLQRASLDFTMAYGGNAAEFVRSSYDIQSAIAGLTDNEL
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHH
SRFTAASATLARATKSSSATITAYMGTMYGIFEQQANAMGRGAWVEQIAGQTATAVQMFK
HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHH
TTGDQMSAAFTSLGASATAAGVDVAEQFAVLGQLQATMSGSEAGTKYRAFLAGIGGAQTT
HCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCE
LGLNFTRRDGTMKGITEIMRLIQGKFGDLSKVTDSDLLAKAFGSKQAVAMVKLLNANIGN
ECCEEECCCCCHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCC
LEKNITTLGNSRGMGKAAEMAGAMADPWKQSLAVINAMRIEIGTQLLPVLYPFIDQAVSG
HHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GREFIKWLQLYPNITRAIGLMAVAMLALAAAGAVVNITLGVMRFVGSGLKAAFTVLAWAF
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RLNAIGTLISASATKVYAMALRHLRAGMLASSIAGRGLAVSIAMVTWPILLIGAAIAGVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLVYKFWQPIRAFFSGFIQGFSDAWVELSKGSPLFTIMARGIAWVWSGVKTLFGWLSGLF
HHHHHHHHHHHHHHHHHHHCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TPIALTGEQFSRVSQAGASFGRIAAAAVSAILAPLEMITNALGLVWDAIVIIGQGWIDIW
HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EAIDIENPLQSMKRIAAGILNIFGNLWALVKSSFSSAYNWIIEKLNLIPGVSIEMQPIPT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
PDALNGNAGDEATPLLTAGQVQSAGPGGIGQQIRNSNNSKTDIDQSVRTTTFNIASASAG
CCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHEEEEECCCCCC
DIRELQELYAR
CHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA