Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238920153

Identifier: 238920153

GI number: 238920153

Start: 2168259

End: 2168741

Strand: Direct

Name: 238920153

Synonym: NT01EI_2259

Alternate gene names: NA

Gene position: 2168259-2168741 (Clockwise)

Preceding gene: 238920152

Following gene: 238920154

Centisome position: 56.88

GC content: 65.22

Gene sequence:

>483_bases
ATGTTTGACGGTAAAAGCATCGACTATCAGCAGACAACCCTCCAGAACGATGGATTCTGGCCGGACATTGACGCGGGTGA
TTTTGAGCGCGCCCGCACTATTCCGCCCGTCATCGATCACGGCGTGGTGATCAACGCCCTGCTGACGGCGATCGCCGAGT
TGAACATGAGCCTGACCGCCACCCAGACACGCTATCGGGAGGCCGGATACAACACCGCTGATGCCGTGCCCGGCCCCGCC
GCCATCGATGCCGTGCGGCGCGATGGGGCACCGCGCCGCACGCATCTGACGGCGCTGTATATCAAGGCGCTCTATGCCCG
CGCAAAGGCCGACCTGCTGCCCGAGTTCGCCACCATTGGACGGCGCGACGCGCACCCCGGGCAGGAGGCGCCGGACGTAC
GCCGGGGACTGCTGGCTGAGTCTGCCATGGCACTGCGCGCCATCATGCAGCGCCCGCGCTGCTCTGTCAGCCTGATCGAT
TGA

Upstream 100 bases:

>100_bases
CGACTACCACAGGCCAAAGCGGGCGCGGTGGAGGGACACAGGCCAATCGGCCGGCGTGTACCGCGGAAACCGGTCTGCCC
GCTTTTTTTAGGATTACGCC

Downstream 100 bases:

>100_bases
GGATACGCCATGACGCAGCTGTCGGAACTGACCGCCTATATCCAGCACCACCTGCCGCCGCGGGCGAACACCCGCTTTTA
CAGCGAGATGGACAACATCA

Product: hypothetical protein

Products: NA

Alternate protein names: Head Completion Protein; Head Completion/Stabilization Protein; Phage Head Completeion Protein; Head Completion/Stabilization Protein Bacteriophage Origin; Prophage; Phage Gene; Phage Head Completion

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MFDGKSIDYQQTTLQNDGFWPDIDAGDFERARTIPPVIDHGVVINALLTAIAELNMSLTATQTRYREAGYNTADAVPGPA
AIDAVRRDGAPRRTHLTALYIKALYARAKADLLPEFATIGRRDAHPGQEAPDVRRGLLAESAMALRAIMQRPRCSVSLID

Sequences:

>Translated_160_residues
MFDGKSIDYQQTTLQNDGFWPDIDAGDFERARTIPPVIDHGVVINALLTAIAELNMSLTATQTRYREAGYNTADAVPGPA
AIDAVRRDGAPRRTHLTALYIKALYARAKADLLPEFATIGRRDAHPGQEAPDVRRGLLAESAMALRAIMQRPRCSVSLID
>Mature_160_residues
MFDGKSIDYQQTTLQNDGFWPDIDAGDFERARTIPPVIDHGVVINALLTAIAELNMSLTATQTRYREAGYNTADAVPGPA
AIDAVRRDGAPRRTHLTALYIKALYARAKADLLPEFATIGRRDAHPGQEAPDVRRGLLAESAMALRAIMQRPRCSVSLID

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17532; Mature: 17532

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDGKSIDYQQTTLQNDGFWPDIDAGDFERARTIPPVIDHGVVINALLTAIAELNMSLTA
CCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
TQTRYREAGYNTADAVPGPAAIDAVRRDGAPRRTHLTALYIKALYARAKADLLPEFATIG
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRDAHPGQEAPDVRRGLLAESAMALRAIMQRPRCSVSLID
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MFDGKSIDYQQTTLQNDGFWPDIDAGDFERARTIPPVIDHGVVINALLTAIAELNMSLTA
CCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHH
TQTRYREAGYNTADAVPGPAAIDAVRRDGAPRRTHLTALYIKALYARAKADLLPEFATIG
HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRDAHPGQEAPDVRRGLLAESAMALRAIMQRPRCSVSLID
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA