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The map label for this gene is xerC [H]

Identifier: 238920129

GI number: 238920129

Start: 2150206

End: 2151093

Strand: Reverse

Name: xerC [H]

Synonym: NT01EI_2235

Alternate gene names: 238920129

Gene position: 2151093-2150206 (Counterclockwise)

Preceding gene: 238920130

Following gene: 238920125

Centisome position: 56.42

GC content: 54.17

Gene sequence:

>888_bases
ATGGGTGAGTCAGCAACTCATCTATCGGATTTGATTCTGCGTTGGTATGAGTTACATGGACGGATGCTGTCATCAGGCGC
TGGGCGTAAGGGAAAATTGGATGCAATTTGTCGGCGGCTTGGCGATCCATTGGCCGGTGATTTTGATAAGGGTATGTTTG
CCCGTTATCGGGAGCGGCGGCTGAATGGAGAGTGGAATCCCAAGGGGAAAAAGCGCCTGCAGGAGGCCACGGTTAACCGT
GAACAGGCTTATCTGCATGCGGTATTTGCGGAACTGCGCAGGCTCGGTGAGTGGGAAGGGGGTAACCCTCTCGATGGCAT
TCGCCAGTTTCGCGAAGGGGATCAAGAGCTGGCTTTTTTATATGCCGATGAGATTACGCGCCTGCTGGCGGCCTGCGATG
CATCGAGTAAGGCTGATTTGGGGGGTATCGTGCGGGTATGTCTGGCTACCGGAGCGCGCTGGAGCGAGGTGCAGTCGTTG
CGCCAATCGCAGGTGTTGCCTGGACGATTGACCTTTACCCATACCAAGAGCAAAAAGAACCGCACTGTACCCATCTCCGA
ACGATTGCAGGCCCTGCTGCCTACAAAGCAGGGAAGGTTGTTTACCCCCTGCTATGAAGCTTTCAAGGCTGCACTGGCAC
GGGCAGGGCTTCACCTGCCGAAAGGACAGCGTACCCACGTATTGCGCCACACCTTTGCCAGCCATTTTATGATGCAGGGC
GGCAATATTCTGGTATTGCAGCAGATATTGGGCCATAGCACGATCACGATGACGATGCGCTATGCACACTTTGCGCCCGA
TCATTTGGATGCGGCGCTGGCTCTGAACCCATTTGATAACCTTGATACGCTGAAAAAATGCGGTGGCAAAAATGGCAGCA
GAATTTGA

Upstream 100 bases:

>100_bases
TTATGGGCGGGATGGCCAGCGTATCCGCCGGCAATTTACGACCAGGGGAGAGGCCCTTGCTTTTGAGCGTAGGATGAATC
CGCGGGGAGTGAGTTTAGAT

Downstream 100 bases:

>100_bases
TAGAGAATCGATTTGCCCCGTTTCACGCCAATTAAATATATTTAAAATCATATTCTTATGATTTTTAAAAGGTCGATTTA
GTTTTTAAAATCCCTCGGCG

Product: integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MGESATHLSDLILRWYELHGRMLSSGAGRKGKLDAICRRLGDPLAGDFDKGMFARYRERRLNGEWNPKGKKRLQEATVNR
EQAYLHAVFAELRRLGEWEGGNPLDGIRQFREGDQELAFLYADEITRLLAACDASSKADLGGIVRVCLATGARWSEVQSL
RQSQVLPGRLTFTHTKSKKNRTVPISERLQALLPTKQGRLFTPCYEAFKAALARAGLHLPKGQRTHVLRHTFASHFMMQG
GNILVLQQILGHSTITMTMRYAHFAPDHLDAALALNPFDNLDTLKKCGGKNGSRI

Sequences:

>Translated_295_residues
MGESATHLSDLILRWYELHGRMLSSGAGRKGKLDAICRRLGDPLAGDFDKGMFARYRERRLNGEWNPKGKKRLQEATVNR
EQAYLHAVFAELRRLGEWEGGNPLDGIRQFREGDQELAFLYADEITRLLAACDASSKADLGGIVRVCLATGARWSEVQSL
RQSQVLPGRLTFTHTKSKKNRTVPISERLQALLPTKQGRLFTPCYEAFKAALARAGLHLPKGQRTHVLRHTFASHFMMQG
GNILVLQQILGHSTITMTMRYAHFAPDHLDAALALNPFDNLDTLKKCGGKNGSRI
>Mature_294_residues
GESATHLSDLILRWYELHGRMLSSGAGRKGKLDAICRRLGDPLAGDFDKGMFARYRERRLNGEWNPKGKKRLQEATVNRE
QAYLHAVFAELRRLGEWEGGNPLDGIRQFREGDQELAFLYADEITRLLAACDASSKADLGGIVRVCLATGARWSEVQSLR
QSQVLPGRLTFTHTKSKKNRTVPISERLQALLPTKQGRLFTPCYEAFKAALARAGLHLPKGQRTHVLRHTFASHFMMQGG
NILVLQQILGHSTITMTMRYAHFAPDHLDAALALNPFDNLDTLKKCGGKNGSRI

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 33019; Mature: 32888

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGESATHLSDLILRWYELHGRMLSSGAGRKGKLDAICRRLGDPLAGDFDKGMFARYRERR
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LNGEWNPKGKKRLQEATVNREQAYLHAVFAELRRLGEWEGGNPLDGIRQFREGDQELAFL
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHH
YADEITRLLAACDASSKADLGGIVRVCLATGARWSEVQSLRQSQVLPGRLTFTHTKSKKN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCC
RTVPISERLQALLPTKQGRLFTPCYEAFKAALARAGLHLPKGQRTHVLRHTFASHFMMQG
CCCCHHHHHHHHCCCCCCCEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
GNILVLQQILGHSTITMTMRYAHFAPDHLDAALALNPFDNLDTLKKCGGKNGSRI
CCEEEHHHHHCCCHHEEEHHHHHCCCHHHCHHEEECCCCCHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GESATHLSDLILRWYELHGRMLSSGAGRKGKLDAICRRLGDPLAGDFDKGMFARYRERR
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LNGEWNPKGKKRLQEATVNREQAYLHAVFAELRRLGEWEGGNPLDGIRQFREGDQELAFL
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHH
YADEITRLLAACDASSKADLGGIVRVCLATGARWSEVQSLRQSQVLPGRLTFTHTKSKKN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCCCC
RTVPISERLQALLPTKQGRLFTPCYEAFKAALARAGLHLPKGQRTHVLRHTFASHFMMQG
CCCCHHHHHHHHCCCCCCCEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC
GNILVLQQILGHSTITMTMRYAHFAPDHLDAALALNPFDNLDTLKKCGGKNGSRI
CCEEEHHHHHCCCHHEEEHHHHHCCCHHHCHHEEECCCCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA