Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920108

Identifier: 238920108

GI number: 238920108

Start: 2131916

End: 2132062

Strand: Direct

Name: 238920108

Synonym: NT01EI_2214

Alternate gene names: NA

Gene position: 2131916-2132062 (Clockwise)

Preceding gene: 238920104

Following gene: 238920109

Centisome position: 55.92

GC content: 46.26

Gene sequence:

>147_bases
ATGGTTCTCATTCTGAAGTGCCAGTGTACGGTTAAAAACGAAGCGACAAGCTCCTGCGAAGCACAGCATATCGCGCTCCT
GCTGATCTTTGGTCTTAACTGGAATTTGAAAGCTGGAAGTCGCTTCATCCATACCATTATGCGTTGA

Upstream 100 bases:

>100_bases
GAGAGGGTGATTCTTGTAGCCATTGTGTTTCAGGCGCGGATTTCCACTCAATGAGCCATGAAGCCATTTGGGTGTAGGGG
ATAGAGTTCTTTCCCGCTTT

Downstream 100 bases:

>100_bases
TCTATGACAAAAGAAACTGATATTCGCCGAGGAGGACACTGTGTTTTCCTGATGCATATTCACTTGGTATTCGTCGCCAA
ATGTCGACGAAATATATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 48

Protein sequence:

>48_residues
MVLILKCQCTVKNEATSSCEAQHIALLLIFGLNWNLKAGSRFIHTIMR

Sequences:

>Translated_48_residues
MVLILKCQCTVKNEATSSCEAQHIALLLIFGLNWNLKAGSRFIHTIMR
>Mature_48_residues
MVLILKCQCTVKNEATSSCEAQHIALLLIFGLNWNLKAGSRFIHTIMR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5418; Mature: 5418

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLILKCQCTVKNEATSSCEAQHIALLLIFGLNWNLKAGSRFIHTIMR
CEEEEEEEEEECCCCCCCCCHHHEEEEEEECCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MVLILKCQCTVKNEATSSCEAQHIALLLIFGLNWNLKAGSRFIHTIMR
CEEEEEEEEEECCCCCCCCCHHHEEEEEEECCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA