| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920089
Identifier: 238920089
GI number: 238920089
Start: 2118858
End: 2119910
Strand: Direct
Name: 238920089
Synonym: NT01EI_2195
Alternate gene names: NA
Gene position: 2118858-2119910 (Clockwise)
Preceding gene: 238920073
Following gene: 238920090
Centisome position: 55.58
GC content: 64.2
Gene sequence:
>1053_bases ATGATGGTACGTCATTCCACCCGTTATTATCATGCAAATAGATTTGCCGCTGATTATCAGGCTATCACCATAGCACGCTT TTCCCCCGCTATCCCTCCGGCACGGCAGAGCCAGGGTGAAAAGCATGGCTTTCCTGCCATCACCATGCCACTATGCGGCG AAATTATCGGTTCAAAAGGTGAAGGCGTGGCGGTTGCGCAGTGCCCCGCATCATGCGGAGAGCTCATTCAGGGCTGGATT TTAGGCAGTGAGAAGCTGGTCTCCTGTCCCGTCGACTGGTACAGCACGGTCGAAGTCTGCAACGGCGCGCCACTTTCGCA GGAGCGCCCGCTCTCCCGAATGATGGTTGAACGCCTGCTACAGCACTGGGGCTACCCGGCGCAGATGGGCCAAGCGTTGC GCATCGAGACTCACTCGACCATCCCCCTGGCCAAGGGGATGGCCAGCAGCACGGCGGATATCGCCGCCACCGCCGTGGCG GCCGCGCACCATCTGGGGCGACGGCTGGACGAACCGACGCTGGCGGCGCTGTGTGTCTCGCTGGAACCCACCGACAGCAC CCTGTTTCGCCAGCTGACCCTGTTCGATCATAACGATGCCTCCACCCAGCTCGCCTGCGGCAACGCGCCTGAACTGGATG TGTTGCTGCTCGAAAGCCCGCTGACCCTGCGCACCGCCGACTACCACCGCCGCGCGCGCCAGAGGGCGTTACTGGCGGAG GCGCCAACGCTGCAACGCGCCTGGCGACAGCTGCAGGAGGGATGTCAGCGCCAAGATCCTTACCGCCTGGGAGAGGCGGC CACCCTCAGCGCCATCGCCAGCCAGCGGCTGTTGCCGAAGGCGGATTTCCCCGCGCTGCTGGCCATGGTGGAGCAGTTCG GCCTGTATGGCGTCAACGTGGCACACAGCGGCAGCGTGGTGGGGCTGCTGCTGGATCGCCGCCGGCACGATGTCGGGGCG CTGCGGCACCACCTCACGCAGCACGGGTTAACGCGCCATTGGCCCACCCAGCATCTGCTCAAACTGATCGGCGGCGGCGT CAGGCTACGCTGA
Upstream 100 bases:
>100_bases CGCTCGCCCAGCATCACAAATAGATATTCATGCTCACTCCTGTGCGGCCCTCATCGCCCACCACAGAAGAAAAGACGGCG CAATTTAGCATAAAAACAGC
Downstream 100 bases:
>100_bases GGCGCGGCCGACGCGCCTGACATCATTCACCGGGAGAGGGAGAGGCACGGTTAAAGATGTCTGCCCCCGGGGGCAGACTA CCCTGTCGAATCTTATCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Propanediol Utilization Protein PduX; Kinase; Ghmp Kinase; PduX-Like Protein; Protein Involved In Propanediol Utilization; Propanediol Utilization Kinase PduX; L-Threonine Kinase; PduX Protein; Cobalamin Biosynthesis Kinase; Propanediol Utilization Kinase; GHMP Kinase Domain Protein
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MMVRHSTRYYHANRFAADYQAITIARFSPAIPPARQSQGEKHGFPAITMPLCGEIIGSKGEGVAVAQCPASCGELIQGWI LGSEKLVSCPVDWYSTVEVCNGAPLSQERPLSRMMVERLLQHWGYPAQMGQALRIETHSTIPLAKGMASSTADIAATAVA AAHHLGRRLDEPTLAALCVSLEPTDSTLFRQLTLFDHNDASTQLACGNAPELDVLLLESPLTLRTADYHRRARQRALLAE APTLQRAWRQLQEGCQRQDPYRLGEAATLSAIASQRLLPKADFPALLAMVEQFGLYGVNVAHSGSVVGLLLDRRRHDVGA LRHHLTQHGLTRHWPTQHLLKLIGGGVRLR
Sequences:
>Translated_350_residues MMVRHSTRYYHANRFAADYQAITIARFSPAIPPARQSQGEKHGFPAITMPLCGEIIGSKGEGVAVAQCPASCGELIQGWI LGSEKLVSCPVDWYSTVEVCNGAPLSQERPLSRMMVERLLQHWGYPAQMGQALRIETHSTIPLAKGMASSTADIAATAVA AAHHLGRRLDEPTLAALCVSLEPTDSTLFRQLTLFDHNDASTQLACGNAPELDVLLLESPLTLRTADYHRRARQRALLAE APTLQRAWRQLQEGCQRQDPYRLGEAATLSAIASQRLLPKADFPALLAMVEQFGLYGVNVAHSGSVVGLLLDRRRHDVGA LRHHLTQHGLTRHWPTQHLLKLIGGGVRLR >Mature_350_residues MMVRHSTRYYHANRFAADYQAITIARFSPAIPPARQSQGEKHGFPAITMPLCGEIIGSKGEGVAVAQCPASCGELIQGWI LGSEKLVSCPVDWYSTVEVCNGAPLSQERPLSRMMVERLLQHWGYPAQMGQALRIETHSTIPLAKGMASSTADIAATAVA AAHHLGRRLDEPTLAALCVSLEPTDSTLFRQLTLFDHNDASTQLACGNAPELDVLLLESPLTLRTADYHRRARQRALLAE APTLQRAWRQLQEGCQRQDPYRLGEAATLSAIASQRLLPKADFPALLAMVEQFGLYGVNVAHSGSVVGLLLDRRRHDVGA LRHHLTQHGLTRHWPTQHLLKLIGGGVRLR
Specific function: Unknown
COG id: COG4542
COG function: function code Q; Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38399; Mature: 38399
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVRHSTRYYHANRFAADYQAITIARFSPAIPPARQSQGEKHGFPAITMPLCGEIIGSKG CCCCCCCCEEECCHHHCCHHEEEEEECCCCCCCHHHCCCCCCCCCEECHHHHHHHHCCCC EGVAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVEVCNGAPLSQERPLSRMMVERLL CCEEEEECCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH QHWGYPAQMGQALRIETHSTIPLAKGMASSTADIAATAVAAAHHLGRRLDEPTLAALCVS HHCCCCHHCCCEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEE LEPTDSTLFRQLTLFDHNDASTQLACGNAPELDVLLLESPLTLRTADYHRRARQRALLAE CCCCCHHHHHHHHHEECCCCCCEEECCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHC APTLQRAWRQLQEGCQRQDPYRLGEAATLSAIASQRLLPKADFPALLAMVEQFGLYGVNV CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEE AHSGSVVGLLLDRRRHDVGALRHHLTQHGLTRHWPTQHLLKLIGGGVRLR ECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MMVRHSTRYYHANRFAADYQAITIARFSPAIPPARQSQGEKHGFPAITMPLCGEIIGSKG CCCCCCCCEEECCHHHCCHHEEEEEECCCCCCCHHHCCCCCCCCCEECHHHHHHHHCCCC EGVAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVEVCNGAPLSQERPLSRMMVERLL CCEEEEECCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHH QHWGYPAQMGQALRIETHSTIPLAKGMASSTADIAATAVAAAHHLGRRLDEPTLAALCVS HHCCCCHHCCCEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEEEE LEPTDSTLFRQLTLFDHNDASTQLACGNAPELDVLLLESPLTLRTADYHRRARQRALLAE CCCCCHHHHHHHHHEECCCCCCEEECCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHC APTLQRAWRQLQEGCQRQDPYRLGEAATLSAIASQRLLPKADFPALLAMVEQFGLYGVNV CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEE AHSGSVVGLLLDRRRHDVGALRHHLTQHGLTRHWPTQHLLKLIGGGVRLR ECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA