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The map label for this gene is rpmJ

Identifier: 238920060

GI number: 238920060

Start: 2094178

End: 2094303

Strand: Reverse

Name: rpmJ

Synonym: NT01EI_2165

Alternate gene names: 238920060

Gene position: 2094303-2094178 (Counterclockwise)

Preceding gene: 238920069

Following gene: 238920056

Centisome position: 54.94

GC content: 55.56

Gene sequence:

>126_bases
ATGAAGATTCTCTCTTCCCTGAAAACGGCAAAACATCGTCACCCCGACTGCCGTATCGTGCGTCGCCGCGGCAGGTTGTA
CGTTATATGCAAAAGCGATCCCCGCTTTAAGGCGCGCCAGCGCTGA

Upstream 100 bases:

>100_bases
TTTACCCGGAGCGCCGTTGGGTACCTTTTTTCGCGATTGCGCTGGATGGATCCCCCCTGTGGGGGATCCGCGTTGTCGCG
TTGGGTGGAGGAGCGTGCCG

Downstream 100 bases:

>100_bases
TGGGGTGGTTTTTCACGATCCTGCGTGGTGCTACGTGCCTTGGGAACGCACGATGCTCCCTCCTGGCGCTATTAACAAAG
CTGTATGAGGGGCGTTGGCG

Product: ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MKILSSLKTAKHRHPDCRIVRRRGRLYVICKSDPRFKARQR

Sequences:

>Translated_41_residues
MKILSSLKTAKHRHPDCRIVRRRGRLYVICKSDPRFKARQR
>Mature_41_residues
MKILSSLKTAKHRHPDCRIVRRRGRLYVICKSDPRFKARQR

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

Organism=Escherichia coli, GI87081713, Length=40, Percent_Identity=77.5, Blast_Score=70, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL36_EDWI9 (C5BFR3)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002933575.1
- GeneID:   7961598
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_2165
- ProtClustDB:   CLSK2813261
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4978; Mature: 4978

Theoretical pI: Translated: 12.24; Mature: 12.24

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILSSLKTAKHRHPDCRIVRRRGRLYVICKSDPRFKARQR
CCHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKILSSLKTAKHRHPDCRIVRRRGRLYVICKSDPRFKARQR
CCHHHHHHHHHCCCCCCEEEECCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA