Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920051

Identifier: 238920051

GI number: 238920051

Start: 2088005

End: 2088328

Strand: Direct

Name: 238920051

Synonym: NT01EI_2157

Alternate gene names: NA

Gene position: 2088005-2088328 (Clockwise)

Preceding gene: 238920049

Following gene: 238920055

Centisome position: 54.77

GC content: 49.07

Gene sequence:

>324_bases
TTGTGCGACGGCGCTGAGAGTGAACTGAGTACGCCGCATGACCGTGAAGAAAATACCTTCGAACCCCAGCGGATTAAGAA
GTGCCAGGGCTTTGTTAATGGAATGGTCGCCCCCTACATCTTGTGCCACAGTGGGACGATAAATCGTCACTACTTGAGCG
GAGCGGCCATCATGAGTGTTAAGACTATCGGCATCGATTTGGCAAAAGAGGTTTTTCAGATCCACGGAACTGACGAACAC
GGCAAGCGCTTGTTCAACAAGCAACTCAAGCGAGCAAAAAGACCCTGTACACGATTCTGTGTAAATGCCTTTTCTCAGAA
ATGA

Upstream 100 bases:

>100_bases
AACAGCGCTTAATACTGAATGGACGGAACACCTCGGGCACGAGAAAAATGCTCCAAAATCAGGCTAGAATACCCGCAACG
GCTATTCATCCAAAACGCTG

Downstream 100 bases:

>100_bases
CCGTCCAGACGATCACCGAACTCGATAATAAAGCGGCTCATTGCCATACGCCAGTCCCTCAGCGGCATGGTCCATTTCTG
TGATGCCGCCTGGATCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MCDGAESELSTPHDREENTFEPQRIKKCQGFVNGMVAPYILCHSGTINRHYLSGAAIMSVKTIGIDLAKEVFQIHGTDEH
GKRLFNKQLKRAKRPCTRFCVNAFSQK

Sequences:

>Translated_107_residues
MCDGAESELSTPHDREENTFEPQRIKKCQGFVNGMVAPYILCHSGTINRHYLSGAAIMSVKTIGIDLAKEVFQIHGTDEH
GKRLFNKQLKRAKRPCTRFCVNAFSQK
>Mature_107_residues
MCDGAESELSTPHDREENTFEPQRIKKCQGFVNGMVAPYILCHSGTINRHYLSGAAIMSVKTIGIDLAKEVFQIHGTDEH
GKRLFNKQLKRAKRPCTRFCVNAFSQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12083; Mature: 12083

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCDGAESELSTPHDREENTFEPQRIKKCQGFVNGMVAPYILCHSGTINRHYLSGAAIMSV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHCCHHHHHH
KTIGIDLAKEVFQIHGTDEHGKRLFNKQLKRAKRPCTRFCVNAFSQK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
>Mature Secondary Structure
MCDGAESELSTPHDREENTFEPQRIKKCQGFVNGMVAPYILCHSGTINRHYLSGAAIMSV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHCCHHHHHH
KTIGIDLAKEVFQIHGTDEHGKRLFNKQLKRAKRPCTRFCVNAFSQK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA