| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920051
Identifier: 238920051
GI number: 238920051
Start: 2088005
End: 2088328
Strand: Direct
Name: 238920051
Synonym: NT01EI_2157
Alternate gene names: NA
Gene position: 2088005-2088328 (Clockwise)
Preceding gene: 238920049
Following gene: 238920055
Centisome position: 54.77
GC content: 49.07
Gene sequence:
>324_bases TTGTGCGACGGCGCTGAGAGTGAACTGAGTACGCCGCATGACCGTGAAGAAAATACCTTCGAACCCCAGCGGATTAAGAA GTGCCAGGGCTTTGTTAATGGAATGGTCGCCCCCTACATCTTGTGCCACAGTGGGACGATAAATCGTCACTACTTGAGCG GAGCGGCCATCATGAGTGTTAAGACTATCGGCATCGATTTGGCAAAAGAGGTTTTTCAGATCCACGGAACTGACGAACAC GGCAAGCGCTTGTTCAACAAGCAACTCAAGCGAGCAAAAAGACCCTGTACACGATTCTGTGTAAATGCCTTTTCTCAGAA ATGA
Upstream 100 bases:
>100_bases AACAGCGCTTAATACTGAATGGACGGAACACCTCGGGCACGAGAAAAATGCTCCAAAATCAGGCTAGAATACCCGCAACG GCTATTCATCCAAAACGCTG
Downstream 100 bases:
>100_bases CCGTCCAGACGATCACCGAACTCGATAATAAAGCGGCTCATTGCCATACGCCAGTCCCTCAGCGGCATGGTCCATTTCTG TGATGCCGCCTGGATCGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MCDGAESELSTPHDREENTFEPQRIKKCQGFVNGMVAPYILCHSGTINRHYLSGAAIMSVKTIGIDLAKEVFQIHGTDEH GKRLFNKQLKRAKRPCTRFCVNAFSQK
Sequences:
>Translated_107_residues MCDGAESELSTPHDREENTFEPQRIKKCQGFVNGMVAPYILCHSGTINRHYLSGAAIMSVKTIGIDLAKEVFQIHGTDEH GKRLFNKQLKRAKRPCTRFCVNAFSQK >Mature_107_residues MCDGAESELSTPHDREENTFEPQRIKKCQGFVNGMVAPYILCHSGTINRHYLSGAAIMSVKTIGIDLAKEVFQIHGTDEH GKRLFNKQLKRAKRPCTRFCVNAFSQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12083; Mature: 12083
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDGAESELSTPHDREENTFEPQRIKKCQGFVNGMVAPYILCHSGTINRHYLSGAAIMSV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHCCHHHHHH KTIGIDLAKEVFQIHGTDEHGKRLFNKQLKRAKRPCTRFCVNAFSQK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCC >Mature Secondary Structure MCDGAESELSTPHDREENTFEPQRIKKCQGFVNGMVAPYILCHSGTINRHYLSGAAIMSV CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHCCHHHHHH KTIGIDLAKEVFQIHGTDEHGKRLFNKQLKRAKRPCTRFCVNAFSQK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA