| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919945
Identifier: 238919945
GI number: 238919945
Start: 1973129
End: 1973242
Strand: Reverse
Name: 238919945
Synonym: NT01EI_2049
Alternate gene names: NA
Gene position: 1973242-1973129 (Counterclockwise)
Preceding gene: 238919951
Following gene: 238919944
Centisome position: 51.76
GC content: 52.63
Gene sequence:
>114_bases GTGGGGATAAAATCGGCGCTTGATCACAAGGTGGCCGAGGGATGTGCGCCCGGTCGCGTTATTGCGCTGAATAGCGGTGC TATCGAGCCTGTACAATTTTGTGTAATTACCTGA
Upstream 100 bases:
>100_bases CACTGTCAGCCTGGTAGCAAAATAGCATGTCCTGCTGACCGGACTGTTTTTTGGTTTTAATAAAGAAGGCGAAATATTCA GGCATGGCGAGGCTCTCCGA
Downstream 100 bases:
>100_bases TTTTGATATGTTCAATCCAACATCAAAAGCAGGTTGATTTATGGACGAAAAACAGTTGCAGGCCCTGGCTAACGAACTGG CCAAAAATCTCAAAACCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 37; Mature: 36
Protein sequence:
>37_residues MGIKSALDHKVAEGCAPGRVIALNSGAIEPVQFCVIT
Sequences:
>Translated_37_residues MGIKSALDHKVAEGCAPGRVIALNSGAIEPVQFCVIT >Mature_36_residues GIKSALDHKVAEGCAPGRVIALNSGAIEPVQFCVIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3797; Mature: 3665
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKSALDHKVAEGCAPGRVIALNSGAIEPVQFCVIT CCCCHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEC >Mature Secondary Structure GIKSALDHKVAEGCAPGRVIALNSGAIEPVQFCVIT CCCHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA