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The map label for this gene is recE [C]

Identifier: 238919937

GI number: 238919937

Start: 1966205

End: 1968685

Strand: Direct

Name: recE [C]

Synonym: NT01EI_2041

Alternate gene names: 238919937

Gene position: 1966205-1968685 (Clockwise)

Preceding gene: 238919936

Following gene: 238919938

Centisome position: 51.58

GC content: 64.65

Gene sequence:

>2481_bases
ATGTCTGAAACCTTCGCATTTCTCACCAAGGCCAAGAAAAAATCCGGCAAACCGGACATGATGTTTTGGTGCTCAGCCAC
CAATGAACGCATCGCTCGCTCCAAACTCAGCATCGCGCTGGACGCCGCCGGGCTGGATGAGGCCGACTACTTTAACCCCC
AGCGCACCCATCTGCCGGTAGTCGATGATTTGCCACCGGAAGACGTACTCAGCAGCGACTTCTGCCGCCATTACCAAATG
GAGGATAACAACTGGGTGCGCCGTCAGGAGCCGCTGCCCCCCGCAAAGACAGCGCCGCCGTCAGGCGAACCACAGCCGCC
ATCGGCACCCGCAGAACCCGAAGAATCGGCACCTGCAGAGCCCGACGATACCCCGCTCAGCTTCCGGCAGCTGCCGCTTG
AGCAGCGTGCGGCGCTGGTACAACTCTATGGCCCACGCGACTATTACCTCGACGATCTGCCCACCGCCCTCGAAATTCTC
AATGCCGAAGGCGAGATCTACGCCAGCAACTACCATCTGGCGGTCGCCATCGGAAAATGCCGCGAACTGGCACAGCAGGA
TGCCGCCGGGCTGGATGCGCTGATCATGCAAATCCAGCAACGCTACAACCACAATATCCCCAAGTGGCCAGAGCTGGTGA
CCTTTATCCGCCAGCGCATGACGGCCGGGGCGCTCACCACCGCCAGCGGCGCAACGCGGGGAGCCCCCGTCATGCTGGCG
CCGGGGTGCCCCTTTGATACGGAGTTTCTGCGCCACACCATCGCCTGCGCCCTGCAGCCGGCCAACGGTTACGACCTGCT
GACCCCCGATCCGGCGATCGTCGCCCGCGCACAGCAGCTGATGGCGCATAGCGATAAGGCGCTGACCATCTGGTACACAC
TGCTCGCCAACACCCCGGGGATCCTGGAAATCCACCCCGACCAAATCTTTGCCATGATCCAGGCGGCGCCGGAGTCCATC
GCCTGGGACGAAGGCGCCACCCGGCGCTTTATCTGCGAAAATCTGGGTGTCATTCAGCCGGTGCCCCGCCGGGCGCCGCC
CCAGCAAGAGGATCGGTCTGGCGACGCCGCGCCGCTCAATCCGGCCCCCGGCGACATGACGGCCCTGTTCGCCGCCTCAC
CGCTGGCGAGCCTGCCCACCGAGTCAGCCCCGGACACGGCAACGCCCACACAGGAGCAAGATAAGAAGCAGGAGCAGGTG
ACGCCACCCCGCTTTGAGCCGGGGCGCTATCCGGGACTCTCCTCGGCGGACTACCACGCCGCCAACGGCATCAGCAGTAC
CATGCTCAAAGACGCCCGCATCAGCCTGATGTATTTTCATGGCCGCCACATCGCCAAAACCATCCCGCGCGAGGCGTCAC
CGGCGCTGCTGCTCGGCTCCCTGATCCACACCCTGGCACTGGAGCCGGAAAAGTTTGCCGCCGAATACGCTCTGGAGCCG
CAGCTCCCGCCCGACGTCTTCACCGGCAGCGAATCGATGAAAAAAGTCATCGAGGCCCATAACGCCACCTTACCCGCCCC
GCTCTCTGCCGATCAGCTCAAGGCGCCTCTGCTGGCGCACAATGCCGGGCTGCCCGCGCCGCTGCCCCTCAGCGGCAGTG
CCGACGAACTCGCCCGGCTGTATGCGGCGCTGCCCGCCGCGTTTCAGACGCTGGAGCAGCCCGAGGGCGCCAGCGCCATC
AAGACGTGCCTCAAGGCCTACAACGCCAGCCTGCCCGCGCCGCTAAAAACCGGCGGCAGCCGCGACGCACTGCTGGAGCA
ACTGGCGCAAATCGACCCCGCCGCGGTCGAGGCAGAGCGCCAGAAACCCCAGCCGCTGAACACCAGTGGGAAAAAAGAGG
AGCTGATGGCCAGCCTGCGCCAGATCCAGCCGGATGCCCGCTTTGCCGACGAGATCCTGGCCGACTGGCAGCGTCAGGCC
GCAGGGAAAATCCCGGTCAGTCAGGCGCAGTACACCCTGTGCTGCGCCATCTGCGACGCGCTACTCGCCGATGCGTTAGC
CGGCCCCCTGCTACGCCACCCCCGGCGTGAGGTCGAAGTCAGCTACTTCGGGCTGGATGACAACACCGGGCTGGAGATCC
GCGTGCGTCCCGATGTGGAAATCGACACCGGCCACGCCCGCATCGGCCTGGATCTCAAATCCGTCAGCCTCGGCTACGTC
AAGCAGGACAACCTGCGCACCCGCCTGCACCGCGAAATCATCGAGCGGGACTACCACCTCAGCGCCGGCATGTACTGCGA
CCTCGCCATGCTCGACCAGTTTTTCTGGATTTTCGTCAACAAAGATCCGGGCTACCACTGGGTGGCCTTGGTCGAAGCCT
CCCCGGACGAACTGGCGCTGGGGCGGCTGGAATACCAACGCCAGCTGGCCGCCATCCGCCAGGCGATGGACAGCAACCAC
TGGCCCGGCCCGATCGTCGATGTCATCACCGATGAACTGACCGACTACGAACAACGCCGCCTGCAGCACCTTGCCGCCTA
A

Upstream 100 bases:

>100_bases
CCCAGGCCGAATCAGCCCCAGCGCAGTCCGGCCACCCGCACGCTGTTTTTCCCTTTGCTCCGCCCTTTCCGCTTCCTCTT
TTCACCGGGAGAACATCGCT

Downstream 100 bases:

>100_bases
GGAGCCCCATATGAAAACGGAAACCGCCGACAACAGCCACAGCGCCCTGATCGATAACGTCACCATCCTGACCAATGGCG
AACTGTTTGACCGCCTGATG

Product: gifsy-1 prophage RecE

Products: 5'-Phosphomononucleotides [C]

Alternate protein names: Exodeoxyribonuclease VIII; Gifsy-1 Prophage Protein; Exonuclease VIII; Entero Exodeoxyribonuclease VIII

Number of amino acids: Translated: 826; Mature: 825

Protein sequence:

>826_residues
MSETFAFLTKAKKKSGKPDMMFWCSATNERIARSKLSIALDAAGLDEADYFNPQRTHLPVVDDLPPEDVLSSDFCRHYQM
EDNNWVRRQEPLPPAKTAPPSGEPQPPSAPAEPEESAPAEPDDTPLSFRQLPLEQRAALVQLYGPRDYYLDDLPTALEIL
NAEGEIYASNYHLAVAIGKCRELAQQDAAGLDALIMQIQQRYNHNIPKWPELVTFIRQRMTAGALTTASGATRGAPVMLA
PGCPFDTEFLRHTIACALQPANGYDLLTPDPAIVARAQQLMAHSDKALTIWYTLLANTPGILEIHPDQIFAMIQAAPESI
AWDEGATRRFICENLGVIQPVPRRAPPQQEDRSGDAAPLNPAPGDMTALFAASPLASLPTESAPDTATPTQEQDKKQEQV
TPPRFEPGRYPGLSSADYHAANGISSTMLKDARISLMYFHGRHIAKTIPREASPALLLGSLIHTLALEPEKFAAEYALEP
QLPPDVFTGSESMKKVIEAHNATLPAPLSADQLKAPLLAHNAGLPAPLPLSGSADELARLYAALPAAFQTLEQPEGASAI
KTCLKAYNASLPAPLKTGGSRDALLEQLAQIDPAAVEAERQKPQPLNTSGKKEELMASLRQIQPDARFADEILADWQRQA
AGKIPVSQAQYTLCCAICDALLADALAGPLLRHPRREVEVSYFGLDDNTGLEIRVRPDVEIDTGHARIGLDLKSVSLGYV
KQDNLRTRLHREIIERDYHLSAGMYCDLAMLDQFFWIFVNKDPGYHWVALVEASPDELALGRLEYQRQLAAIRQAMDSNH
WPGPIVDVITDELTDYEQRRLQHLAA

Sequences:

>Translated_826_residues
MSETFAFLTKAKKKSGKPDMMFWCSATNERIARSKLSIALDAAGLDEADYFNPQRTHLPVVDDLPPEDVLSSDFCRHYQM
EDNNWVRRQEPLPPAKTAPPSGEPQPPSAPAEPEESAPAEPDDTPLSFRQLPLEQRAALVQLYGPRDYYLDDLPTALEIL
NAEGEIYASNYHLAVAIGKCRELAQQDAAGLDALIMQIQQRYNHNIPKWPELVTFIRQRMTAGALTTASGATRGAPVMLA
PGCPFDTEFLRHTIACALQPANGYDLLTPDPAIVARAQQLMAHSDKALTIWYTLLANTPGILEIHPDQIFAMIQAAPESI
AWDEGATRRFICENLGVIQPVPRRAPPQQEDRSGDAAPLNPAPGDMTALFAASPLASLPTESAPDTATPTQEQDKKQEQV
TPPRFEPGRYPGLSSADYHAANGISSTMLKDARISLMYFHGRHIAKTIPREASPALLLGSLIHTLALEPEKFAAEYALEP
QLPPDVFTGSESMKKVIEAHNATLPAPLSADQLKAPLLAHNAGLPAPLPLSGSADELARLYAALPAAFQTLEQPEGASAI
KTCLKAYNASLPAPLKTGGSRDALLEQLAQIDPAAVEAERQKPQPLNTSGKKEELMASLRQIQPDARFADEILADWQRQA
AGKIPVSQAQYTLCCAICDALLADALAGPLLRHPRREVEVSYFGLDDNTGLEIRVRPDVEIDTGHARIGLDLKSVSLGYV
KQDNLRTRLHREIIERDYHLSAGMYCDLAMLDQFFWIFVNKDPGYHWVALVEASPDELALGRLEYQRQLAAIRQAMDSNH
WPGPIVDVITDELTDYEQRRLQHLAA
>Mature_825_residues
SETFAFLTKAKKKSGKPDMMFWCSATNERIARSKLSIALDAAGLDEADYFNPQRTHLPVVDDLPPEDVLSSDFCRHYQME
DNNWVRRQEPLPPAKTAPPSGEPQPPSAPAEPEESAPAEPDDTPLSFRQLPLEQRAALVQLYGPRDYYLDDLPTALEILN
AEGEIYASNYHLAVAIGKCRELAQQDAAGLDALIMQIQQRYNHNIPKWPELVTFIRQRMTAGALTTASGATRGAPVMLAP
GCPFDTEFLRHTIACALQPANGYDLLTPDPAIVARAQQLMAHSDKALTIWYTLLANTPGILEIHPDQIFAMIQAAPESIA
WDEGATRRFICENLGVIQPVPRRAPPQQEDRSGDAAPLNPAPGDMTALFAASPLASLPTESAPDTATPTQEQDKKQEQVT
PPRFEPGRYPGLSSADYHAANGISSTMLKDARISLMYFHGRHIAKTIPREASPALLLGSLIHTLALEPEKFAAEYALEPQ
LPPDVFTGSESMKKVIEAHNATLPAPLSADQLKAPLLAHNAGLPAPLPLSGSADELARLYAALPAAFQTLEQPEGASAIK
TCLKAYNASLPAPLKTGGSRDALLEQLAQIDPAAVEAERQKPQPLNTSGKKEELMASLRQIQPDARFADEILADWQRQAA
GKIPVSQAQYTLCCAICDALLADALAGPLLRHPRREVEVSYFGLDDNTGLEIRVRPDVEIDTGHARIGLDLKSVSLGYVK
QDNLRTRLHREIIERDYHLSAGMYCDLAMLDQFFWIFVNKDPGYHWVALVEASPDELALGRLEYQRQLAAIRQAMDSNHW
PGPIVDVITDELTDYEQRRLQHLAA

Specific function: Is Involved In The Rece Pathway Of Recombination. Has A Strong Preference For Linear Duplex Substrate DNA And Appears To Be Unable To Initiate Degradation From Single-Stranded Breaks In DNA. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.11.- [C]

Molecular weight: Translated: 90703; Mature: 90571

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETFAFLTKAKKKSGKPDMMFWCSATNERIARSKLSIALDAAGLDEADYFNPQRTHLPV
CCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHEEEECCCCCHHHCCCCCCCCCCC
VDDLPPEDVLSSDFCRHYQMEDNNWVRRQEPLPPAKTAPPSGEPQPPSAPAEPEESAPAE
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDDTPLSFRQLPLEQRAALVQLYGPRDYYLDDLPTALEILNAEGEIYASNYHLAVAIGKC
CCCCCCHHHHCCHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCEEEEEEHHHH
RELAQQDAAGLDALIMQIQQRYNHNIPKWPELVTFIRQRMTAGALTTASGATRGAPVMLA
HHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEE
PGCPFDTEFLRHTIACALQPANGYDLLTPDPAIVARAQQLMAHSDKALTIWYTLLANTPG
CCCCCCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCCCC
ILEIHPDQIFAMIQAAPESIAWDEGATRRFICENLGVIQPVPRRAPPQQEDRSGDAAPLN
EEEECHHHHHHHHHHCCHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCC
PAPGDMTALFAASPLASLPTESAPDTATPTQEQDKKQEQVTPPRFEPGRYPGLSSADYHA
CCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
ANGISSTMLKDARISLMYFHGRHIAKTIPREASPALLLGSLIHTLALEPEKFAAEYALEP
HCCCHHHHHHHCEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCC
QLPPDVFTGSESMKKVIEAHNATLPAPLSADQLKAPLLAHNAGLPAPLPLSGSADELARL
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHH
YAALPAAFQTLEQPEGASAIKTCLKAYNASLPAPLKTGGSRDALLEQLAQIDPAAVEAER
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH
QKPQPLNTSGKKEELMASLRQIQPDARFADEILADWQRQAAGKIPVSQAQYTLCCAICDA
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LLADALAGPLLRHPRREVEVSYFGLDDNTGLEIRVRPDVEIDTGHARIGLDLKSVSLGYV
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCEEECCCEEEEEEEECCEECCE
KQDNLRTRLHREIIERDYHLSAGMYCDLAMLDQFFWIFVNKDPGYHWVALVEASPDELAL
ECCHHHHHHHHHHHHCCCCCCCCCEECHHHHCCEEEEEEECCCCCEEEEEEECCCCHHHH
GRLEYQRQLAAIRQAMDSNHWPGPIVDVITDELTDYEQRRLQHLAA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SETFAFLTKAKKKSGKPDMMFWCSATNERIARSKLSIALDAAGLDEADYFNPQRTHLPV
CCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHEEEECCCCCHHHCCCCCCCCCCC
VDDLPPEDVLSSDFCRHYQMEDNNWVRRQEPLPPAKTAPPSGEPQPPSAPAEPEESAPAE
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDDTPLSFRQLPLEQRAALVQLYGPRDYYLDDLPTALEILNAEGEIYASNYHLAVAIGKC
CCCCCCHHHHCCHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCEEEEEEHHHH
RELAQQDAAGLDALIMQIQQRYNHNIPKWPELVTFIRQRMTAGALTTASGATRGAPVMLA
HHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEE
PGCPFDTEFLRHTIACALQPANGYDLLTPDPAIVARAQQLMAHSDKALTIWYTLLANTPG
CCCCCCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCCCC
ILEIHPDQIFAMIQAAPESIAWDEGATRRFICENLGVIQPVPRRAPPQQEDRSGDAAPLN
EEEECHHHHHHHHHHCCHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCC
PAPGDMTALFAASPLASLPTESAPDTATPTQEQDKKQEQVTPPRFEPGRYPGLSSADYHA
CCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
ANGISSTMLKDARISLMYFHGRHIAKTIPREASPALLLGSLIHTLALEPEKFAAEYALEP
HCCCHHHHHHHCEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCC
QLPPDVFTGSESMKKVIEAHNATLPAPLSADQLKAPLLAHNAGLPAPLPLSGSADELARL
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHH
YAALPAAFQTLEQPEGASAIKTCLKAYNASLPAPLKTGGSRDALLEQLAQIDPAAVEAER
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH
QKPQPLNTSGKKEELMASLRQIQPDARFADEILADWQRQAAGKIPVSQAQYTLCCAICDA
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LLADALAGPLLRHPRREVEVSYFGLDDNTGLEIRVRPDVEIDTGHARIGLDLKSVSLGYV
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCEEECCCEEEEEEEECCEECCE
KQDNLRTRLHREIIERDYHLSAGMYCDLAMLDQFFWIFVNKDPGYHWVALVEASPDELAL
ECCHHHHHHHHHHHHCCCCCCCCCEECHHHHCCEEEEEEECCCCCEEEEEEECCCCHHHH
GRLEYQRQLAAIRQAMDSNHWPGPIVDVITDELTDYEQRRLQHLAA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Double-Stranded DNA [C]

Specific reaction: Degradation Of Double-Stranded DNA. It Acts Progressively In A 5' To 3' Direction, Releasing 5'-Phosphomononucleotides. [C]

General reaction: Hydrolase; Acting on ester bonds; Exodeoxyribonucleases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA