Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919927

Identifier: 238919927

GI number: 238919927

Start: 1956023

End: 1956961

Strand: Reverse

Name: 238919927

Synonym: NT01EI_2031

Alternate gene names: NA

Gene position: 1956961-1956023 (Counterclockwise)

Preceding gene: 238919928

Following gene: 238919926

Centisome position: 51.33

GC content: 56.44

Gene sequence:

>939_bases
ATGAGCATGATGCTGATGGCGATGGCCATGAAAATTAAGACAGGGAATCCTCTGCGCAAATTGGTGCTGCTGAAGCTGGC
CGACAACGCCAACGATCAGGGCGAGTGCTGGCCGTCGATCCCGTATCTGGCGGCGACCTGCGAGATGGCCGAGCGTTCGG
TGCAGCACCATATCAAATGGCTGCATGAGCAGGGCTTTTTGTGGGTGGAGCCGCGCAAGAGCAAAAATGGCGGTCACCAG
TCGAATATTTATCATCTGACCCTGGAAAAGCGCTTACAGATGCCGCCGGATGAGGATGAAAAGGGCGATCTGCCTCCGGC
CGAAAATCAGGAAAAAAAGGGTGCTGCGCAGGGGGCGGGATCAGCCGGTGCAAATGGTGCGTCTTTGTCTGAGGTGCCAG
TGCAACACATACGCCAGGGTTTGTCGTTTGATTCACTAGGGGTGGAGCAGCCATTGCACCCAGAACCTATCATTAAGAAC
CTATCATTAGAACCTATACCCCCCTTACCCCCCAACAACAGCGAATGCGTTGAGCCCGACAAGGACAAAACCGATCGGGG
AAAACCGGATTGGACAGCGCCCGATCGACACTATCGCAAACCCGATAATCCTGACGCCGATCACCCAGAACCGGAAAATC
TCACCCGACGACCTGCTGAACGTATGGACTATGGCGCTTATCTGGCGGCCTACAACGCGCTGGTGGGCGACAGGCTCCCC
CATGCGGTGACCGTCAACGAGGAGCGTAAGCGTAAACTGCGTTCGCTGGTGAAATCGTTGGCGACACCGAATCTGGAGGG
CTTCCGGGCCTATGTCTCGGCGTTTCTCGACCATGCCAAGCCGTTTTACTTTGGCTTCGGCGATGCGGGCTGGATCGCCG
ATTTTGATTACCTGCTGCGCCAGAAAACCCTGACCCGGGTACGGGAGGGGACACTGTGA

Upstream 100 bases:

>100_bases
GCGGGCCTATGTCGAGTGCCGCCATGTCGCGGCATCGGTTGACTGCGCCCGTCGTTTGGCGATGCGAATTTCCACAGTGA
CGAAAAACGGTTGGTGACCT

Downstream 100 bases:

>100_bases
ACGCCAATCTCCAGTACCTGGAGTCCAGTGTGATCGGTGGCCTGCTGCTGGGTGGCCTGACACCGGCTGCGCAGGAGGTG
CTGGCGTCGCTGGAGCCTGC

Product: replication of DNA

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSMMLMAMAMKIKTGNPLRKLVLLKLADNANDQGECWPSIPYLAATCEMAERSVQHHIKWLHEQGFLWVEPRKSKNGGHQ
SNIYHLTLEKRLQMPPDEDEKGDLPPAENQEKKGAAQGAGSAGANGASLSEVPVQHIRQGLSFDSLGVEQPLHPEPIIKN
LSLEPIPPLPPNNSECVEPDKDKTDRGKPDWTAPDRHYRKPDNPDADHPEPENLTRRPAERMDYGAYLAAYNALVGDRLP
HAVTVNEERKRKLRSLVKSLATPNLEGFRAYVSAFLDHAKPFYFGFGDAGWIADFDYLLRQKTLTRVREGTL

Sequences:

>Translated_312_residues
MSMMLMAMAMKIKTGNPLRKLVLLKLADNANDQGECWPSIPYLAATCEMAERSVQHHIKWLHEQGFLWVEPRKSKNGGHQ
SNIYHLTLEKRLQMPPDEDEKGDLPPAENQEKKGAAQGAGSAGANGASLSEVPVQHIRQGLSFDSLGVEQPLHPEPIIKN
LSLEPIPPLPPNNSECVEPDKDKTDRGKPDWTAPDRHYRKPDNPDADHPEPENLTRRPAERMDYGAYLAAYNALVGDRLP
HAVTVNEERKRKLRSLVKSLATPNLEGFRAYVSAFLDHAKPFYFGFGDAGWIADFDYLLRQKTLTRVREGTL
>Mature_311_residues
SMMLMAMAMKIKTGNPLRKLVLLKLADNANDQGECWPSIPYLAATCEMAERSVQHHIKWLHEQGFLWVEPRKSKNGGHQS
NIYHLTLEKRLQMPPDEDEKGDLPPAENQEKKGAAQGAGSAGANGASLSEVPVQHIRQGLSFDSLGVEQPLHPEPIIKNL
SLEPIPPLPPNNSECVEPDKDKTDRGKPDWTAPDRHYRKPDNPDADHPEPENLTRRPAERMDYGAYLAAYNALVGDRLPH
AVTVNEERKRKLRSLVKSLATPNLEGFRAYVSAFLDHAKPFYFGFGDAGWIADFDYLLRQKTLTRVREGTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35013; Mature: 34882

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMMLMAMAMKIKTGNPLRKLVLLKLADNANDQGECWPSIPYLAATCEMAERSVQHHIKW
CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LHEQGFLWVEPRKSKNGGHQSNIYHLTLEKRLQMPPDEDEKGDLPPAENQEKKGAAQGAG
HHHCCCEEECCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
SAGANGASLSEVPVQHIRQGLSFDSLGVEQPLHPEPIIKNLSLEPIPPLPPNNSECVEPD
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
KDKTDRGKPDWTAPDRHYRKPDNPDADHPEPENLTRRPAERMDYGAYLAAYNALVGDRLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCC
HAVTVNEERKRKLRSLVKSLATPNLEGFRAYVSAFLDHAKPFYFGFGDAGWIADFDYLLR
CEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH
QKTLTRVREGTL
HHHHHHHHHCCC
>Mature Secondary Structure 
SMMLMAMAMKIKTGNPLRKLVLLKLADNANDQGECWPSIPYLAATCEMAERSVQHHIKW
HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LHEQGFLWVEPRKSKNGGHQSNIYHLTLEKRLQMPPDEDEKGDLPPAENQEKKGAAQGAG
HHHCCCEEECCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
SAGANGASLSEVPVQHIRQGLSFDSLGVEQPLHPEPIIKNLSLEPIPPLPPNNSECVEPD
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
KDKTDRGKPDWTAPDRHYRKPDNPDADHPEPENLTRRPAERMDYGAYLAAYNALVGDRLP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCC
HAVTVNEERKRKLRSLVKSLATPNLEGFRAYVSAFLDHAKPFYFGFGDAGWIADFDYLLR
CEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHH
QKTLTRVREGTL
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA