Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

Click here to switch to the map view.

The map label for this gene is 238919920

Identifier: 238919920

GI number: 238919920

Start: 1950637

End: 1951149

Strand: Direct

Name: 238919920

Synonym: NT01EI_2024

Alternate gene names: NA

Gene position: 1950637-1951149 (Clockwise)

Preceding gene: 238919919

Following gene: 238919933

Centisome position: 51.17

GC content: 56.53

Gene sequence:

>513_bases
ATGTTGAAAATTATTGATGTGGATGTGGTCGGCGACCATGTTATCGAGGTCGAATTTAGCGACGGCTTCCGTGGTAGGGC
TGATTTAGCCGCGCTGTTCAGCAAACCGCCCTTCTCTGCGATCGCCGACTTTAACCGCTTTTCCCTGACAGCCAGCGGCG
TGCTGAACTGGGGAGATGCCGAGCTTTCTGCCGATACGGTTAGGCGCATCAGCAAAGGCGCAGTGGTATCGGCATCCTCA
CGCGCACTCACGCCAGAAAATGTAGAAGCGATCCTCCGCCAGGCCACCTGGGAATCCATGAGCGAGGGGCGCCCGGATAT
TTTGCAGGCCGCGTTAAGGGGATACGCGGAACAGCTGGGCCACGCGGACGTCATCAAGAGGGCCGGGATTGCCAGCCGCA
GCAGTGCATACAAAACGCTATCGCCATCAACGAACCCCAGCTTTAAATCGCTGGCAAAGATCAGCGGCGCGATTTTGGCT
ATCGTGCGTGAAAATAACGCGCAGCATGGTTAA

Upstream 100 bases:

>100_bases
TCCTGCCGCATCCTGCACGGTGCGGCCGTAGTCGTCGTTCTACAGATAGCCGACTAACCATGACTCGTCTCCCTCTCCCG
TAAGAGGCAGCTATGCAGCT

Downstream 100 bases:

>100_bases
GGGCTTACTGTGCGCTGTCTGCTCCACCTTTCAGTGGTGGGGGGAAAGATATTACCTCTTGTCACTGTTATCTATTTTTA
CTGCTGGTACGGAGGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Addiction Module Antidote Protein

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MLKIIDVDVVGDHVIEVEFSDGFRGRADLAALFSKPPFSAIADFNRFSLTASGVLNWGDAELSADTVRRISKGAVVSASS
RALTPENVEAILRQATWESMSEGRPDILQAALRGYAEQLGHADVIKRAGIASRSSAYKTLSPSTNPSFKSLAKISGAILA
IVRENNAQHG

Sequences:

>Translated_170_residues
MLKIIDVDVVGDHVIEVEFSDGFRGRADLAALFSKPPFSAIADFNRFSLTASGVLNWGDAELSADTVRRISKGAVVSASS
RALTPENVEAILRQATWESMSEGRPDILQAALRGYAEQLGHADVIKRAGIASRSSAYKTLSPSTNPSFKSLAKISGAILA
IVRENNAQHG
>Mature_170_residues
MLKIIDVDVVGDHVIEVEFSDGFRGRADLAALFSKPPFSAIADFNRFSLTASGVLNWGDAELSADTVRRISKGAVVSASS
RALTPENVEAILRQATWESMSEGRPDILQAALRGYAEQLGHADVIKRAGIASRSSAYKTLSPSTNPSFKSLAKISGAILA
IVRENNAQHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18156; Mature: 18156

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIIDVDVVGDHVIEVEFSDGFRGRADLAALFSKPPFSAIADFNRFSLTASGVLNWGDA
CEEEEEEEEECCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHCCCHHEEECCCEEECCCC
ELSADTVRRISKGAVVSASSRALTPENVEAILRQATWESMSEGRPDILQAALRGYAEQLG
CCCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
HADVIKRAGIASRSSAYKTLSPSTNPSFKSLAKISGAILAIVRENNAQHG
HHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHEEEEEECCCCCCC
>Mature Secondary Structure
MLKIIDVDVVGDHVIEVEFSDGFRGRADLAALFSKPPFSAIADFNRFSLTASGVLNWGDA
CEEEEEEEEECCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHCCCHHEEECCCEEECCCC
ELSADTVRRISKGAVVSASSRALTPENVEAILRQATWESMSEGRPDILQAALRGYAEQLG
CCCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
HADVIKRAGIASRSSAYKTLSPSTNPSFKSLAKISGAILAIVRENNAQHG
HHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA