| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919920
Identifier: 238919920
GI number: 238919920
Start: 1950637
End: 1951149
Strand: Direct
Name: 238919920
Synonym: NT01EI_2024
Alternate gene names: NA
Gene position: 1950637-1951149 (Clockwise)
Preceding gene: 238919919
Following gene: 238919933
Centisome position: 51.17
GC content: 56.53
Gene sequence:
>513_bases ATGTTGAAAATTATTGATGTGGATGTGGTCGGCGACCATGTTATCGAGGTCGAATTTAGCGACGGCTTCCGTGGTAGGGC TGATTTAGCCGCGCTGTTCAGCAAACCGCCCTTCTCTGCGATCGCCGACTTTAACCGCTTTTCCCTGACAGCCAGCGGCG TGCTGAACTGGGGAGATGCCGAGCTTTCTGCCGATACGGTTAGGCGCATCAGCAAAGGCGCAGTGGTATCGGCATCCTCA CGCGCACTCACGCCAGAAAATGTAGAAGCGATCCTCCGCCAGGCCACCTGGGAATCCATGAGCGAGGGGCGCCCGGATAT TTTGCAGGCCGCGTTAAGGGGATACGCGGAACAGCTGGGCCACGCGGACGTCATCAAGAGGGCCGGGATTGCCAGCCGCA GCAGTGCATACAAAACGCTATCGCCATCAACGAACCCCAGCTTTAAATCGCTGGCAAAGATCAGCGGCGCGATTTTGGCT ATCGTGCGTGAAAATAACGCGCAGCATGGTTAA
Upstream 100 bases:
>100_bases TCCTGCCGCATCCTGCACGGTGCGGCCGTAGTCGTCGTTCTACAGATAGCCGACTAACCATGACTCGTCTCCCTCTCCCG TAAGAGGCAGCTATGCAGCT
Downstream 100 bases:
>100_bases GGGCTTACTGTGCGCTGTCTGCTCCACCTTTCAGTGGTGGGGGGAAAGATATTACCTCTTGTCACTGTTATCTATTTTTA CTGCTGGTACGGAGGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Addiction Module Antidote Protein
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MLKIIDVDVVGDHVIEVEFSDGFRGRADLAALFSKPPFSAIADFNRFSLTASGVLNWGDAELSADTVRRISKGAVVSASS RALTPENVEAILRQATWESMSEGRPDILQAALRGYAEQLGHADVIKRAGIASRSSAYKTLSPSTNPSFKSLAKISGAILA IVRENNAQHG
Sequences:
>Translated_170_residues MLKIIDVDVVGDHVIEVEFSDGFRGRADLAALFSKPPFSAIADFNRFSLTASGVLNWGDAELSADTVRRISKGAVVSASS RALTPENVEAILRQATWESMSEGRPDILQAALRGYAEQLGHADVIKRAGIASRSSAYKTLSPSTNPSFKSLAKISGAILA IVRENNAQHG >Mature_170_residues MLKIIDVDVVGDHVIEVEFSDGFRGRADLAALFSKPPFSAIADFNRFSLTASGVLNWGDAELSADTVRRISKGAVVSASS RALTPENVEAILRQATWESMSEGRPDILQAALRGYAEQLGHADVIKRAGIASRSSAYKTLSPSTNPSFKSLAKISGAILA IVRENNAQHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18156; Mature: 18156
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIIDVDVVGDHVIEVEFSDGFRGRADLAALFSKPPFSAIADFNRFSLTASGVLNWGDA CEEEEEEEEECCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHCCCHHEEECCCEEECCCC ELSADTVRRISKGAVVSASSRALTPENVEAILRQATWESMSEGRPDILQAALRGYAEQLG CCCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC HADVIKRAGIASRSSAYKTLSPSTNPSFKSLAKISGAILAIVRENNAQHG HHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHEEEEEECCCCCCC >Mature Secondary Structure MLKIIDVDVVGDHVIEVEFSDGFRGRADLAALFSKPPFSAIADFNRFSLTASGVLNWGDA CEEEEEEEEECCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHCCCHHEEECCCEEECCCC ELSADTVRRISKGAVVSASSRALTPENVEAILRQATWESMSEGRPDILQAALRGYAEQLG CCCHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC HADVIKRAGIASRSSAYKTLSPSTNPSFKSLAKISGAILAIVRENNAQHG HHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHHHHEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA