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The map label for this gene is pipD [H]

Identifier: 238919876

GI number: 238919876

Start: 1906760

End: 1907914

Strand: Reverse

Name: pipD [H]

Synonym: NT01EI_1980

Alternate gene names: 238919876

Gene position: 1907914-1906760 (Counterclockwise)

Preceding gene: 238919878

Following gene: 238919875

Centisome position: 50.05

GC content: 57.14

Gene sequence:

>1155_bases
ATGAAGGTCTCTTCTGTCTCTTCTGTTTCCCCATCGGCCGTTCCGCTAAGCCAGGACTCATGTACCACAATCCTGATTGG
CGCGGCGGCGACCCGCGACGGTTCGCGTATTATTGCCCGTACCGAGGACCACGATCCGCTGCTGTCAAAAGTGCTGCTCA
AGCATCCGCCGCAGGCAGATCAGCGTGGGCGGTTTCATGCCAATGAAAATGCCTTTAGCTGGCCGCTCCCCGCAACGGCG
CAGGGTTATAGCGCATTTGCCAACGGTAAGTCCGGAAAAACGGCGGCGCAGATGACTTGGGGCGCCGCCGGATTTAATCA
GCGCGGTGTCGGAATGAGTGCTACCGAGACGATTTTTGCCAGTGAACAGGCTCTGTTACACGATCCTTATCTGAGCGAGA
GTGGGATCACCGAGGACAGCATTGTCGATATTGTTCTGCCCTATATCGACTCTGCACGGGAAGGGGTGTCTCGCCTGGGA
AAGATGATCGAAGAGCAGGGCGCCGGCGAAGGGTTTGGCGTTGCCTTTATTGATCCGGATGAGATTTGGTACCTGGAAAC
CGGCAGTGCGCACCAGTGGCTGGCCGCTAAACTGGCGCCGCACTGCTATTTTGTTACCGGTAATCAGGGGCGGCTGCGCG
ACTATAATCCCGATGACCGCGACGACTATATGGCATCGGCCTCGCTGATCGACTTTGCCCTTCAGCATGGGCTATATGAT
CCCCAGCGCGATGGCCAATTCAATTTTGAGCGGGCCTATACGCGTCATGACGATCGCCTCGACGGCTATTACAACTATCC
GCGGGTGTATGCCCTACAGCAGCTATATCGCCCCGATCCGGACAGAACGTTACAGCAGCCGCAGCGGTTTGCGGTATTCG
AAGCGCCCAGTGACGCGCTGGATGTGGAATCGGTTAAGCGAGGGCTGCGCAACACATATGATAATCTGGGGAGACAGCCC
TATGCGGATACGCCGGACTATACCTGGCGGCCGATTTCCCTGTTCCGCACCCAGCAGTCCCATATCCTGCAGTCGCGCAG
CGGTTTGCCGCGCGCTGAGCGATGTGATATATCTATCCTACGGCATGCCCAGTATTTCGCTCTATATTCCGTTTTATCCC
AATGCCGGGGGCGATGTGCCGGCCGCCTATGGTGA

Upstream 100 bases:

>100_bases
AAATGCGCCATGGTAATATATGGCGTATGCTGAAGCTGATAATCGCAACGTAATGCGTCATTGCTGACGCCATTTCCCTC
AGGCTACAAGGAGTTGAACA

Downstream 100 bases:

>100_bases
GGTTACCAGCGGGGAGGCCGATACGTTCTCGGCGCAGTGGCAGTTTCGCAAGCTGCAGACGCTGATCATGGTGAACTACT
ATCGCTATGCACCTGGCGTC

Product: peptidase family C69

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MKVSSVSSVSPSAVPLSQDSCTTILIGAAATRDGSRIIARTEDHDPLLSKVLLKHPPQADQRGRFHANENAFSWPLPATA
QGYSAFANGKSGKTAAQMTWGAAGFNQRGVGMSATETIFASEQALLHDPYLSESGITEDSIVDIVLPYIDSAREGVSRLG
KMIEEQGAGEGFGVAFIDPDEIWYLETGSAHQWLAAKLAPHCYFVTGNQGRLRDYNPDDRDDYMASASLIDFALQHGLYD
PQRDGQFNFERAYTRHDDRLDGYYNYPRVYALQQLYRPDPDRTLQQPQRFAVFEAPSDALDVESVKRGLRNTYDNLGRQP
YADTPDYTWRPISLFRTQQSHILQSRSGLPRAERCDISILRHAQYFALYSVLSQCRGRCAGRLW

Sequences:

>Translated_384_residues
MKVSSVSSVSPSAVPLSQDSCTTILIGAAATRDGSRIIARTEDHDPLLSKVLLKHPPQADQRGRFHANENAFSWPLPATA
QGYSAFANGKSGKTAAQMTWGAAGFNQRGVGMSATETIFASEQALLHDPYLSESGITEDSIVDIVLPYIDSAREGVSRLG
KMIEEQGAGEGFGVAFIDPDEIWYLETGSAHQWLAAKLAPHCYFVTGNQGRLRDYNPDDRDDYMASASLIDFALQHGLYD
PQRDGQFNFERAYTRHDDRLDGYYNYPRVYALQQLYRPDPDRTLQQPQRFAVFEAPSDALDVESVKRGLRNTYDNLGRQP
YADTPDYTWRPISLFRTQQSHILQSRSGLPRAERCDISILRHAQYFALYSVLSQCRGRCAGRLW
>Mature_384_residues
MKVSSVSSVSPSAVPLSQDSCTTILIGAAATRDGSRIIARTEDHDPLLSKVLLKHPPQADQRGRFHANENAFSWPLPATA
QGYSAFANGKSGKTAAQMTWGAAGFNQRGVGMSATETIFASEQALLHDPYLSESGITEDSIVDIVLPYIDSAREGVSRLG
KMIEEQGAGEGFGVAFIDPDEIWYLETGSAHQWLAAKLAPHCYFVTGNQGRLRDYNPDDRDDYMASASLIDFALQHGLYD
PQRDGQFNFERAYTRHDDRLDGYYNYPRVYALQQLYRPDPDRTLQQPQRFAVFEAPSDALDVESVKRGLRNTYDNLGRQP
YADTPDYTWRPISLFRTQQSHILQSRSGLPRAERCDISILRHAQYFALYSVLSQCRGRCAGRLW

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005322 [H]

Pfam domain/function: PF03577 Peptidase_C69 [H]

EC number: NA

Molecular weight: Translated: 42945; Mature: 42945

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSSVSSVSPSAVPLSQDSCTTILIGAAATRDGSRIIARTEDHDPLLSKVLLKHPPQAD
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCC
QRGRFHANENAFSWPLPATAQGYSAFANGKSGKTAAQMTWGAAGFNQRGVGMSATETIFA
CCCCEECCCCCEECCCCCCCCCHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCHHHHHHH
SEQALLHDPYLSESGITEDSIVDIVLPYIDSAREGVSRLGKMIEEQGAGEGFGVAFIDPD
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
EIWYLETGSAHQWLAAKLAPHCYFVTGNQGRLRDYNPDDRDDYMASASLIDFALQHGLYD
CEEEEECCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PQRDGQFNFERAYTRHDDRLDGYYNYPRVYALQQLYRPDPDRTLQQPQRFAVFEAPSDAL
CCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCCC
DVESVKRGLRNTYDNLGRQPYADTPDYTWRPISLFRTQQSHILQSRSGLPRAERCDISIL
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCHHHH
RHAQYFALYSVLSQCRGRCAGRLW
HHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKVSSVSSVSPSAVPLSQDSCTTILIGAAATRDGSRIIARTEDHDPLLSKVLLKHPPQAD
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCC
QRGRFHANENAFSWPLPATAQGYSAFANGKSGKTAAQMTWGAAGFNQRGVGMSATETIFA
CCCCEECCCCCEECCCCCCCCCHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCHHHHHHH
SEQALLHDPYLSESGITEDSIVDIVLPYIDSAREGVSRLGKMIEEQGAGEGFGVAFIDPD
CCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
EIWYLETGSAHQWLAAKLAPHCYFVTGNQGRLRDYNPDDRDDYMASASLIDFALQHGLYD
CEEEEECCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PQRDGQFNFERAYTRHDDRLDGYYNYPRVYALQQLYRPDPDRTLQQPQRFAVFEAPSDAL
CCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCCC
DVESVKRGLRNTYDNLGRQPYADTPDYTWRPISLFRTQQSHILQSRSGLPRAERCDISIL
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCHHHH
RHAQYFALYSVLSQCRGRCAGRLW
HHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9723926 [H]