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The map label for this gene is 238919874

Identifier: 238919874

GI number: 238919874

Start: 1905342

End: 1905680

Strand: Reverse

Name: 238919874

Synonym: NT01EI_1978

Alternate gene names: NA

Gene position: 1905680-1905342 (Counterclockwise)

Preceding gene: 238919875

Following gene: 238919873

Centisome position: 49.99

GC content: 53.1

Gene sequence:

>339_bases
ATGCAGAAAACTATCCATAAAACGCATGATAAAAATTATTCCCGCAGGCTGACCGCCATGCTGATGCTGCACCGGGGTGA
CCGCGTCAGCGACGTTGCCAGAACGCTCTGCTGTGCCCGTTCCTCCGTCGGACACTGGATTAACTGGTTCACGCTGTCGG
GTGTTGCAGGACTGAAATCACTACCTGCCGGACGAGCCCGGCGCTGGCCTTTTGAGCATATCTGCTCGCTGTTACGTGAG
CTGGTAAAACACGCTCCCGGCGATTTTTGCTACCAGCGTTCACGCTGGAGTACAGAACTTATGACAATAAAAATCAACGA
GATAACCGGATGCCAGTGA

Upstream 100 bases:

>100_bases
CAATCGCCAAATCAAAAAAAATCGCCAAATCAAAATAAATCACCAACCGGACTGAGCAATGCCGATCATAGTACCAATTC
CCCGAACTGACCGACGCTTG

Downstream 100 bases:

>100_bases
CATGCCGGAACTGTTCGCCACTGGTTGCCGTCTGCGGGTCTGGTGTGGCGAAGGGCCGCGCCAACCCTGCGTATCCGTGA
CCCGCATAAGGATGAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: ISO-IS200 39 kDa protein [H]

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MQKTIHKTHDKNYSRRLTAMLMLHRGDRVSDVARTLCCARSSVGHWINWFTLSGVAGLKSLPAGRARRWPFEHICSLLRE
LVKHAPGDFCYQRSRWSTELMTIKINEITGCQ

Sequences:

>Translated_112_residues
MQKTIHKTHDKNYSRRLTAMLMLHRGDRVSDVARTLCCARSSVGHWINWFTLSGVAGLKSLPAGRARRWPFEHICSLLRE
LVKHAPGDFCYQRSRWSTELMTIKINEITGCQ
>Mature_112_residues
MQKTIHKTHDKNYSRRLTAMLMLHRGDRVSDVARTLCCARSSVGHWINWFTLSGVAGLKSLPAGRARRWPFEHICSLLRE
LVKHAPGDFCYQRSRWSTELMTIKINEITGCQ

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 12941; Mature: 12941

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTIHKTHDKNYSRRLTAMLMLHRGDRVSDVARTLCCARSSVGHWINWFTLSGVAGLKS
CCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPAGRARRWPFEHICSLLRELVKHAPGDFCYQRSRWSTELMTIKINEITGCQ
CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MQKTIHKTHDKNYSRRLTAMLMLHRGDRVSDVARTLCCARSSVGHWINWFTLSGVAGLKS
CCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPAGRARRWPFEHICSLLRELVKHAPGDFCYQRSRWSTELMTIKINEITGCQ
CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]