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The map label for this gene is spvC [H]

Identifier: 238919844

GI number: 238919844

Start: 1877438

End: 1878079

Strand: Direct

Name: spvC [H]

Synonym: NT01EI_1948

Alternate gene names: 238919844

Gene position: 1877438-1878079 (Clockwise)

Preceding gene: 238919841

Following gene: 238919849

Centisome position: 49.25

GC content: 49.84

Gene sequence:

>642_bases
ATGAATGAGAGCCTGAAAAATAATTTCGACACTCTACAGCATCAAATGCGGCAGATGCCGCTTTCCCACTTCAAAGTGGA
GCCAAATGCGCCAGACTATTCAGAAATACGCAAGAGTGGCTTCTGTACTCTAAGTCAGGGGTTTCGCCTGTCGAACACGA
GTGATAATTTCTTCATTCATGCCCGTCGACAAGAGCCGCAATATAAAGGGGAATTTATCGGTGACAAGTTCCACATCAGT
GTGCAGGGGCAACAGGTACCGCAGGCCTTTCAGGCGCTATCTGAATTGCTGTTTTCAGGGGACAGCCCGATCGATAAGTG
GAAGGTGACCGATATGGCGCGGGTCGATCAGCAATCTCGCGTTGGCGAAGGTGCCCAGTTCACGCTGTATGTAAAGCCGG
ATCAGGAAGATACTCAGTACAGTGCGGAGATGCTCCACAAAACTCGGCAATTTATAGCGGCTCTGGAGTCCAGGCTATCG
GAAAACGGAATTATCCCGGGGCGAAGCCCCGAGTCAGATGTTCATCCCGAAAGTTGGCAATATGCCAGTTATCGTAATGA
ACTGCGCAGTGAACGCTTCGGTGATGGGATGCAAGGCCAAGCATTACGAGAGGAGCCGTTTTATCGTTTAATGACAGAGT
AA

Upstream 100 bases:

>100_bases
GTAAAGGTCGTTTCCTGTGCCTATTAATCGAGCTCATCTAAAACTAAGCCTCCCGCCCTTAACTGTAGGGCCTACCGCCG
GGAGGCAGAAGATGCCCCCC

Downstream 100 bases:

>100_bases
GCGTAGCGCTGAGGTGATGACGGAAGGCGTTGGTGCCCAGCCTATCCTCACCTCTTGCATGAACACAGAGTGGTCGTCAT
TTCCAGCGGATGACGACACC

Product: phosphothreonine lyase OspF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNESLKNNFDTLQHQMRQMPLSHFKVEPNAPDYSEIRKSGFCTLSQGFRLSNTSDNFFIHARRQEPQYKGEFIGDKFHIS
VQGQQVPQAFQALSELLFSGDSPIDKWKVTDMARVDQQSRVGEGAQFTLYVKPDQEDTQYSAEMLHKTRQFIAALESRLS
ENGIIPGRSPESDVHPESWQYASYRNELRSERFGDGMQGQALREEPFYRLMTE

Sequences:

>Translated_213_residues
MNESLKNNFDTLQHQMRQMPLSHFKVEPNAPDYSEIRKSGFCTLSQGFRLSNTSDNFFIHARRQEPQYKGEFIGDKFHIS
VQGQQVPQAFQALSELLFSGDSPIDKWKVTDMARVDQQSRVGEGAQFTLYVKPDQEDTQYSAEMLHKTRQFIAALESRLS
ENGIIPGRSPESDVHPESWQYASYRNELRSERFGDGMQGQALREEPFYRLMTE
>Mature_213_residues
MNESLKNNFDTLQHQMRQMPLSHFKVEPNAPDYSEIRKSGFCTLSQGFRLSNTSDNFFIHARRQEPQYKGEFIGDKFHIS
VQGQQVPQAFQALSELLFSGDSPIDKWKVTDMARVDQQSRVGEGAQFTLYVKPDQEDTQYSAEMLHKTRQFIAALESRLS
ENGIIPGRSPESDVHPESWQYASYRNELRSERFGDGMQGQALREEPFYRLMTE

Specific function: Not known. This protein is involved in the virulence of salmonellas [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spvC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003519 [H]

Pfam domain/function: PF03536 VRP3 [H]

EC number: NA

Molecular weight: Translated: 24653; Mature: 24653

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNESLKNNFDTLQHQMRQMPLSHFKVEPNAPDYSEIRKSGFCTLSQGFRLSNTSDNFFIH
CCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCHHHHHHCCCEECCCCEEECCCCCCEEEE
ARRQEPQYKGEFIGDKFHISVQGQQVPQAFQALSELLFSGDSPIDKWKVTDMARVDQQSR
ECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHH
VGEGAQFTLYVKPDQEDTQYSAEMLHKTRQFIAALESRLSENGIIPGRSPESDVHPESWQ
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
YASYRNELRSERFGDGMQGQALREEPFYRLMTE
HHHHHHHHHHHHCCCCCCCCCHHHCCHHHHCCC
>Mature Secondary Structure
MNESLKNNFDTLQHQMRQMPLSHFKVEPNAPDYSEIRKSGFCTLSQGFRLSNTSDNFFIH
CCCHHHHHHHHHHHHHHHCCHHHEEECCCCCCHHHHHHCCCEECCCCEEECCCCCCEEEE
ARRQEPQYKGEFIGDKFHISVQGQQVPQAFQALSELLFSGDSPIDKWKVTDMARVDQQSR
ECCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHH
VGEGAQFTLYVKPDQEDTQYSAEMLHKTRQFIAALESRLSENGIIPGRSPESDVHPESWQ
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
YASYRNELRSERFGDGMQGQALREEPFYRLMTE
HHHHHHHHHHHHCCCCCCCCCHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2315022; 11254626 [H]