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The map label for this gene is hrpA [H]

Identifier: 238919838

GI number: 238919838

Start: 1868845

End: 1872729

Strand: Direct

Name: hrpA [H]

Synonym: NT01EI_1942

Alternate gene names: 238919838

Gene position: 1868845-1872729 (Clockwise)

Preceding gene: 238919837

Following gene: 238919840

Centisome position: 49.02

GC content: 62.11

Gene sequence:

>3885_bases
GTGAAATCCCCGCTTGATGCGCTGGCCGACCAGCTTGATGATGTCATGCTGCGCGATCGCCAGCGTTTGATGCGCCGTCT
CCAGGGCGCCAATAAGATCACCCAACCCGATACCCTGCAGGCGACCGCCGCGACGCTGGCGGAGGAGATCGCCCGGGCGC
GTCAGGCGACGGCCAACCGGCGCGCCGCCTGTCCGGCGATTAGCTATCCGCCGGGGCTGCCGGTCAGCCAGAAGAGCGAG
GCACTGCTGGCGGCGATCCGCGATAATCAGGTGGTGATTGTCGCCGGGGAGACCGGGTCCGGTAAAACCACCCAGCTGCC
CAAAATGTGCCTGGCGCTGGGGCGTGGGGTGCGCGGGATGATTGGTCACAGTCAGCCGCGCCGCCTGGCGGCCCGTTCGG
TGGCAGAGCGTATCGCCCATGAGCTGGATACCCCGCTGGGCAGCTGCGTGGGCTATAAGGTACGCTTTAGCGATCGGGTC
GGCGACAACACGCTGGTCAAGCTGATGACCGATGGGATCCTGCTGGCGGAGATCCAGCAGGACCGCCTGCTGATGCAGTA
TGACACGCTGATCATCGATGAGGCCCACGAGCGCAGCCTGAACATCGACTTCATCCTGGGCTATCTGCGCCAGCTGCTGC
CCAGGCGTCCCGACCTCAAGGTGATCATTACCTCGGCGACCATTGATCCGCAGCGTTTCTCCCACCACTTCAATAATGCG
CCGATCGTCGAGGTATCCGGACGGACCTATCCGGTTGAAGTTCGCTACCGCCCTATCGCCGATGGCGAAGGCGATCGCGA
TCAGACTCAGGCAATTATCGATGCAGTGGATGAGCTGCGCCATGAGGCGCCGGGCGATATTCTGATCTTTATGAGCGGCG
AGCGAGAGATCCGCGATACCGCCGACGCGCTGACCCGCCTTGAGCTGTCCCATACCGAGGTGCTGCCGCTGTATGCCCGC
CTGTCCGCCGCCGAGCAGAACCGGGTCTTTCACGCCCATAGTGGACGACGCATTGTACTGGCGACCAACGTGGCTGAGAC
CTCGCTGACGGTGCCGGGGATCAAATATGTTATCGATCCCGGTACGGCGCGCATCAGCCGCTACAGTTATCGCACCAAGG
TTCAGCGGCTGCCGATTGAGCCGATATCCCAGGCGTCGGCCAATCAGCGTAAAGGGCGCTGCGGCCGCGTCTCCGACGGG
ATCTGTATCCGGCTGTACGATGAACAGGACTTCCTGTCGCGTCCTGCCTTTACCGATCCGGAGATCCTGCGCACCAACCT
GGCGTCGGTGATCCTGCAGATGACGGCGCTGGGGCTGGGCGATATTGCCGCCTTCCCCTTTGTCGAGGCACCGGATAAGC
GCAATATTCAGGATGGGGTGCGCCTGCTGGAAGAGCTGGGGGCGGTCACGGTCAATGCCCGTGGACACCAGCAGCTGACC
GCTTTGGGACGCCAGCTGGCGCAGCTGCCCATCGATCCGCGCCTGGCACGTATGGTGATCGAAGGGGAGCGCAACGGCGC
CCTGCGCGAGGTGATGGTGATCGCCGCCGGGCTGTCGATTCAAGACCCGCGTGAACGGCCTGCCGACCGTCCGCAGGCGG
CGGATGAGAAACACCGTCGCTTCAGCGATAAAGAGAGCGACTTTCTGGCGCTGGTCAATCTGTGGAACTATCTGCGCGAA
CAGCAGCAGGCGCTCTCTGCCAACCAGCTGCGCAGGCTGTGTAAAAGCGAGTTTCTCAACTATCTGCGGGTACGTGAGTG
GCAGGATATCTATACCCAGCTGCGTCAGTCGGTGAAATCGCTGGGATTCCATATTAACAGTACTCCCGCCGATTACCGGG
CGCTGCACTGCGCGTTATTGAGCGGTCTGCTCTCCCACCTCGGGCAGAAAGATGTCGAAAAGCAGGAGTTTACCGGCGCG
CGCAACGCTCGTTTCGCCATTTTTCCCGGCTCGTCACTGTTTAAGAAGCCGCCCAAGTGGGCGATGGTGGCGGAGCTGGT
GGAGACCTCCCGCCTGTGGGGACGCGTCGCTGCCCGTATCGATCCGGAGTGGATCGAACCTTTGGCACAGCACCTGATTA
AGCGCAGCTATAGCGATCCGCACTGGGAGAAAAGCCAGGGTGCGGTGATGGCCAGCGAGAAGGTCACGCTGTATGGTCTG
CCGATCGTCAACGAGCGGCGGGTCAACTACGGGCGCATCGATCCGCTGCTGTGCCGGGAGCTGTTTATCCGCCATGCCTT
GGTTCAGGGGGAGTGGCAGACAAAGCACGCCTTTATGCGCGCCAATCAGCGCCTGCGCAGCGAGGTCGAAGAGCTGGAGC
ACAAGTCGCGGCGCCGCGATATTCTGGTGGATGACGAGACGCTGTTTGCCTTTTATGACCGCCGGATCGGTCAAGAGGTG
GTGTCGGTACGGCACTTCGACAGCTGGTGGAAGAAAGCGGGGGCCGCGCAGCCCGAGCTGCTCAACTTTGAGAAGTCGAT
GCTGATCAAAGAGGGGGCGGCCCGCATCAGCGCGCAGGATTACCCCAACGCCTGGCAGCAGGGCAACTTTCGCCTGCGTC
TTTCCTATCAGTTTGAGCCGGGCGCGGATGCCGACGGCGTGACGGTGCATATTCCGCTGGCGATCCTGAATCAGATCGGG
GACAGTGATTTCGATTGGCAGATCCCCGGCATTCGCCGTGAGCGGGTGATGGCGCTGATCAAGTCGTTGCCGAAGCCGCA
GCGGCGTAACTTTGTGCCTGCTCCCAACTATGCCGATGCCTTCCTGGCCCGTGCGACGCCCTTTGAGCTGCCGCTGCTGG
AGTCGATGGAGCGTGAGCTGCGCCGCATGACGGGTGTGACAGTGTCACGTGATGACTGGCAGCTGGATCAGCTGCCCGAT
CACCTGAGCGTAACGTTCCGGGTGCTGGACGATCGTAACCGGCCACTGGCCGAAGGTAAATCGCTGGAGGCACTGAAGCA
GCGTTTGAAGGATCGCGTGCAGCAAACCCTGTCGGCGGTGGCGGACGATGGCCTTGAGCAAGCGGGGCTGCATTTGTGGA
GCTTTGGCCAGTTGCCGCAGTGCCATGAACAAAAGCGCGGCGGTTATGCCATCAAGGCCTACCCGGCGCTGGTGGATGAG
AAAGAGAGCGTGGCGATCCGGCTCTTTGAGACCGAACAGGAGCAGCAGCAGGCGATGCGCACCGGCCTGCGCCGGCTGTT
GCTGCTGAATATTCCGTCTCCGGTGAAGTATCTGCATGAAAAGCTGCCGAACAAGGCCAAACTGGGGCTCTATTTTAATC
CCTATGGCAAGGTATTGGAGCTGATCGACGACTGTATCGCCTGCGGCGTGGATACGCTGGTGGCGCGCCACGGTGGCGCC
GTCTGGGAGACCACGGCGTTTGAGATGTTGCATGAGCGGGTGCGCGGCGCGCTGAATGAGACGGTTGTCGCGATTGCCGC
ACAGGTCGAGCGCATTCTGACCTGTGCCAACGGCATCAATAAGCGTCTGAAAGGGCGGGTGGACATGACGATGGCGCTGG
CCCTCTCCGATATCAAGGCGCAGATGGGCGGGCTTATCTACCGGGGCTTTGTCACAGCCACCGGCGCGGATCGTCTGGCG
GATGTGGAGCGCTATCTGCATGCCATCGAACGTCGCCTGGAGAAGCTGGGCATCGACCCGCACCGCGATCGGGCCCAGAT
GCTGCGCGTTGAACAGGTACATCAGTCCTGGCAGCAGTGGCTTAACCGTCTGCCGCCGGTACGGCGTCAGGCGCCGGAGG
TGCAGGCTATCCGCTGGATGATCGAGGAGCTGCGCGTCAGCTATTTTGCCCAGCAGCTGGGTACGCCCTATCCGGTGTCA
GACAAGCGTATCCTGCAGGCGATGGAGGCGGCGGAGCAGCCATAG

Upstream 100 bases:

>100_bases
CCCCGCGCCCGTCTGTGGTAAGATAGGGAGATAACAGGATATCAACTGCCGCGCCGGGCGAATGCGTATCGCACCGGCGC
CTTTCCAAGGAATTCTGAAC

Downstream 100 bases:

>100_bases
CCACGCCGCCCGGGGCATCAGTGCATCAGGCGCTGCAGCCCCGCGTTAATCGCGGTAACGGCGACGGCGCGGTTATCGGC
CAGCGCCCGGTTTTCTGCCG

Product: ATP-dependent RNA helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1294; Mature: 1294

Protein sequence:

>1294_residues
MKSPLDALADQLDDVMLRDRQRLMRRLQGANKITQPDTLQATAATLAEEIARARQATANRRAACPAISYPPGLPVSQKSE
ALLAAIRDNQVVIVAGETGSGKTTQLPKMCLALGRGVRGMIGHSQPRRLAARSVAERIAHELDTPLGSCVGYKVRFSDRV
GDNTLVKLMTDGILLAEIQQDRLLMQYDTLIIDEAHERSLNIDFILGYLRQLLPRRPDLKVIITSATIDPQRFSHHFNNA
PIVEVSGRTYPVEVRYRPIADGEGDRDQTQAIIDAVDELRHEAPGDILIFMSGEREIRDTADALTRLELSHTEVLPLYAR
LSAAEQNRVFHAHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSDG
ICIRLYDEQDFLSRPAFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAVTVNARGHQQLT
ALGRQLAQLPIDPRLARMVIEGERNGALREVMVIAAGLSIQDPRERPADRPQAADEKHRRFSDKESDFLALVNLWNYLRE
QQQALSANQLRRLCKSEFLNYLRVREWQDIYTQLRQSVKSLGFHINSTPADYRALHCALLSGLLSHLGQKDVEKQEFTGA
RNARFAIFPGSSLFKKPPKWAMVAELVETSRLWGRVAARIDPEWIEPLAQHLIKRSYSDPHWEKSQGAVMASEKVTLYGL
PIVNERRVNYGRIDPLLCRELFIRHALVQGEWQTKHAFMRANQRLRSEVEELEHKSRRRDILVDDETLFAFYDRRIGQEV
VSVRHFDSWWKKAGAAQPELLNFEKSMLIKEGAARISAQDYPNAWQQGNFRLRLSYQFEPGADADGVTVHIPLAILNQIG
DSDFDWQIPGIRRERVMALIKSLPKPQRRNFVPAPNYADAFLARATPFELPLLESMERELRRMTGVTVSRDDWQLDQLPD
HLSVTFRVLDDRNRPLAEGKSLEALKQRLKDRVQQTLSAVADDGLEQAGLHLWSFGQLPQCHEQKRGGYAIKAYPALVDE
KESVAIRLFETEQEQQQAMRTGLRRLLLLNIPSPVKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDTLVARHGGA
VWETTAFEMLHERVRGALNETVVAIAAQVERILTCANGINKRLKGRVDMTMALALSDIKAQMGGLIYRGFVTATGADRLA
DVERYLHAIERRLEKLGIDPHRDRAQMLRVEQVHQSWQQWLNRLPPVRRQAPEVQAIRWMIEELRVSYFAQQLGTPYPVS
DKRILQAMEAAEQP

Sequences:

>Translated_1294_residues
MKSPLDALADQLDDVMLRDRQRLMRRLQGANKITQPDTLQATAATLAEEIARARQATANRRAACPAISYPPGLPVSQKSE
ALLAAIRDNQVVIVAGETGSGKTTQLPKMCLALGRGVRGMIGHSQPRRLAARSVAERIAHELDTPLGSCVGYKVRFSDRV
GDNTLVKLMTDGILLAEIQQDRLLMQYDTLIIDEAHERSLNIDFILGYLRQLLPRRPDLKVIITSATIDPQRFSHHFNNA
PIVEVSGRTYPVEVRYRPIADGEGDRDQTQAIIDAVDELRHEAPGDILIFMSGEREIRDTADALTRLELSHTEVLPLYAR
LSAAEQNRVFHAHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSDG
ICIRLYDEQDFLSRPAFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAVTVNARGHQQLT
ALGRQLAQLPIDPRLARMVIEGERNGALREVMVIAAGLSIQDPRERPADRPQAADEKHRRFSDKESDFLALVNLWNYLRE
QQQALSANQLRRLCKSEFLNYLRVREWQDIYTQLRQSVKSLGFHINSTPADYRALHCALLSGLLSHLGQKDVEKQEFTGA
RNARFAIFPGSSLFKKPPKWAMVAELVETSRLWGRVAARIDPEWIEPLAQHLIKRSYSDPHWEKSQGAVMASEKVTLYGL
PIVNERRVNYGRIDPLLCRELFIRHALVQGEWQTKHAFMRANQRLRSEVEELEHKSRRRDILVDDETLFAFYDRRIGQEV
VSVRHFDSWWKKAGAAQPELLNFEKSMLIKEGAARISAQDYPNAWQQGNFRLRLSYQFEPGADADGVTVHIPLAILNQIG
DSDFDWQIPGIRRERVMALIKSLPKPQRRNFVPAPNYADAFLARATPFELPLLESMERELRRMTGVTVSRDDWQLDQLPD
HLSVTFRVLDDRNRPLAEGKSLEALKQRLKDRVQQTLSAVADDGLEQAGLHLWSFGQLPQCHEQKRGGYAIKAYPALVDE
KESVAIRLFETEQEQQQAMRTGLRRLLLLNIPSPVKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDTLVARHGGA
VWETTAFEMLHERVRGALNETVVAIAAQVERILTCANGINKRLKGRVDMTMALALSDIKAQMGGLIYRGFVTATGADRLA
DVERYLHAIERRLEKLGIDPHRDRAQMLRVEQVHQSWQQWLNRLPPVRRQAPEVQAIRWMIEELRVSYFAQQLGTPYPVS
DKRILQAMEAAEQP
>Mature_1294_residues
MKSPLDALADQLDDVMLRDRQRLMRRLQGANKITQPDTLQATAATLAEEIARARQATANRRAACPAISYPPGLPVSQKSE
ALLAAIRDNQVVIVAGETGSGKTTQLPKMCLALGRGVRGMIGHSQPRRLAARSVAERIAHELDTPLGSCVGYKVRFSDRV
GDNTLVKLMTDGILLAEIQQDRLLMQYDTLIIDEAHERSLNIDFILGYLRQLLPRRPDLKVIITSATIDPQRFSHHFNNA
PIVEVSGRTYPVEVRYRPIADGEGDRDQTQAIIDAVDELRHEAPGDILIFMSGEREIRDTADALTRLELSHTEVLPLYAR
LSAAEQNRVFHAHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSDG
ICIRLYDEQDFLSRPAFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAVTVNARGHQQLT
ALGRQLAQLPIDPRLARMVIEGERNGALREVMVIAAGLSIQDPRERPADRPQAADEKHRRFSDKESDFLALVNLWNYLRE
QQQALSANQLRRLCKSEFLNYLRVREWQDIYTQLRQSVKSLGFHINSTPADYRALHCALLSGLLSHLGQKDVEKQEFTGA
RNARFAIFPGSSLFKKPPKWAMVAELVETSRLWGRVAARIDPEWIEPLAQHLIKRSYSDPHWEKSQGAVMASEKVTLYGL
PIVNERRVNYGRIDPLLCRELFIRHALVQGEWQTKHAFMRANQRLRSEVEELEHKSRRRDILVDDETLFAFYDRRIGQEV
VSVRHFDSWWKKAGAAQPELLNFEKSMLIKEGAARISAQDYPNAWQQGNFRLRLSYQFEPGADADGVTVHIPLAILNQIG
DSDFDWQIPGIRRERVMALIKSLPKPQRRNFVPAPNYADAFLARATPFELPLLESMERELRRMTGVTVSRDDWQLDQLPD
HLSVTFRVLDDRNRPLAEGKSLEALKQRLKDRVQQTLSAVADDGLEQAGLHLWSFGQLPQCHEQKRGGYAIKAYPALVDE
KESVAIRLFETEQEQQQAMRTGLRRLLLLNIPSPVKYLHEKLPNKAKLGLYFNPYGKVLELIDDCIACGVDTLVARHGGA
VWETTAFEMLHERVRGALNETVVAIAAQVERILTCANGINKRLKGRVDMTMALALSDIKAQMGGLIYRGFVTATGADRLA
DVERYLHAIERRLEKLGIDPHRDRAQMLRVEQVHQSWQQWLNRLPPVRRQAPEVQAIRWMIEELRVSYFAQQLGTPYPVS
DKRILQAMEAAEQP

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4826690, Length=639, Percent_Identity=37.0892018779343, Blast_Score=409, Evalue=1e-114,
Organism=Homo sapiens, GI68509926, Length=641, Percent_Identity=35.5694227769111, Blast_Score=392, Evalue=1e-109,
Organism=Homo sapiens, GI256000749, Length=652, Percent_Identity=36.1963190184049, Blast_Score=392, Evalue=1e-108,
Organism=Homo sapiens, GI255982614, Length=652, Percent_Identity=36.1963190184049, Blast_Score=392, Evalue=1e-108,
Organism=Homo sapiens, GI17999539, Length=660, Percent_Identity=36.5151515151515, Blast_Score=377, Evalue=1e-104,
Organism=Homo sapiens, GI20544129, Length=649, Percent_Identity=34.2064714946071, Blast_Score=368, Evalue=1e-101,
Organism=Homo sapiens, GI20336302, Length=640, Percent_Identity=34.21875, Blast_Score=359, Evalue=1e-98,
Organism=Homo sapiens, GI38158022, Length=545, Percent_Identity=37.7981651376147, Blast_Score=355, Evalue=2e-97,
Organism=Homo sapiens, GI299829255, Length=601, Percent_Identity=33.9434276206323, Blast_Score=339, Evalue=1e-92,
Organism=Homo sapiens, GI261878478, Length=658, Percent_Identity=32.370820668693, Blast_Score=334, Evalue=4e-91,
Organism=Homo sapiens, GI166851804, Length=683, Percent_Identity=31.4787701317716, Blast_Score=258, Evalue=2e-68,
Organism=Homo sapiens, GI167830433, Length=673, Percent_Identity=29.2719167904903, Blast_Score=251, Evalue=3e-66,
Organism=Homo sapiens, GI167830436, Length=659, Percent_Identity=29.5902883156297, Blast_Score=243, Evalue=1e-63,
Organism=Homo sapiens, GI261878481, Length=565, Percent_Identity=29.5575221238938, Blast_Score=242, Evalue=1e-63,
Organism=Homo sapiens, GI20336290, Length=540, Percent_Identity=32.962962962963, Blast_Score=241, Evalue=4e-63,
Organism=Homo sapiens, GI20336294, Length=540, Percent_Identity=32.962962962963, Blast_Score=241, Evalue=4e-63,
Organism=Homo sapiens, GI100913206, Length=594, Percent_Identity=29.1245791245791, Blast_Score=224, Evalue=5e-58,
Organism=Homo sapiens, GI20336300, Length=639, Percent_Identity=25.8215962441315, Blast_Score=206, Evalue=1e-52,
Organism=Homo sapiens, GI163914394, Length=647, Percent_Identity=26.8933539412674, Blast_Score=189, Evalue=2e-47,
Organism=Homo sapiens, GI29029601, Length=420, Percent_Identity=30.952380952381, Blast_Score=161, Evalue=4e-39,
Organism=Homo sapiens, GI67782362, Length=340, Percent_Identity=31.1764705882353, Blast_Score=156, Evalue=2e-37,
Organism=Homo sapiens, GI269847874, Length=189, Percent_Identity=40.7407407407407, Blast_Score=147, Evalue=6e-35,
Organism=Homo sapiens, GI39777586, Length=352, Percent_Identity=29.5454545454545, Blast_Score=139, Evalue=3e-32,
Organism=Escherichia coli, GI145693127, Length=1291, Percent_Identity=75.9101471727343, Blast_Score=2053, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=438, Percent_Identity=37.2146118721461, Blast_Score=241, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI17535281, Length=653, Percent_Identity=36.6003062787136, Blast_Score=404, Evalue=1e-112,
Organism=Caenorhabditis elegans, GI17554326, Length=631, Percent_Identity=37.4009508716323, Blast_Score=383, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI25144243, Length=670, Percent_Identity=33.8805970149254, Blast_Score=379, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI32565154, Length=640, Percent_Identity=34.84375, Blast_Score=374, Evalue=1e-103,
Organism=Caenorhabditis elegans, GI17531507, Length=639, Percent_Identity=35.2112676056338, Blast_Score=370, Evalue=1e-102,
Organism=Caenorhabditis elegans, GI17556386, Length=648, Percent_Identity=35.3395061728395, Blast_Score=356, Evalue=5e-98,
Organism=Caenorhabditis elegans, GI71990212, Length=660, Percent_Identity=32.4242424242424, Blast_Score=331, Evalue=2e-90,
Organism=Caenorhabditis elegans, GI71996313, Length=557, Percent_Identity=35.5475763016158, Blast_Score=291, Evalue=2e-78,
Organism=Caenorhabditis elegans, GI17552054, Length=447, Percent_Identity=29.9776286353468, Blast_Score=152, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17507503, Length=362, Percent_Identity=27.6243093922652, Blast_Score=141, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI86562256, Length=198, Percent_Identity=35.8585858585859, Blast_Score=117, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6320850, Length=645, Percent_Identity=36.2790697674419, Blast_Score=416, Evalue=1e-116,
Organism=Saccharomyces cerevisiae, GI6321318, Length=643, Percent_Identity=36.2363919129082, Blast_Score=402, Evalue=1e-112,
Organism=Saccharomyces cerevisiae, GI6322939, Length=647, Percent_Identity=37.5579598145286, Blast_Score=352, Evalue=2e-97,
Organism=Saccharomyces cerevisiae, GI6324338, Length=664, Percent_Identity=33.433734939759, Blast_Score=335, Evalue=3e-92,
Organism=Saccharomyces cerevisiae, GI6322772, Length=660, Percent_Identity=33.4848484848485, Blast_Score=320, Evalue=7e-88,
Organism=Saccharomyces cerevisiae, GI6323451, Length=600, Percent_Identity=27.1666666666667, Blast_Score=218, Evalue=5e-57,
Organism=Saccharomyces cerevisiae, GI6323776, Length=216, Percent_Identity=38.4259259259259, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI20129977, Length=643, Percent_Identity=36.547433903577, Blast_Score=398, Evalue=1e-110,
Organism=Drosophila melanogaster, GI19921728, Length=641, Percent_Identity=35.4134165366615, Blast_Score=397, Evalue=1e-110,
Organism=Drosophila melanogaster, GI19921526, Length=674, Percent_Identity=35.3115727002967, Blast_Score=389, Evalue=1e-108,
Organism=Drosophila melanogaster, GI18859729, Length=631, Percent_Identity=37.4009508716323, Blast_Score=374, Evalue=1e-103,
Organism=Drosophila melanogaster, GI19920696, Length=642, Percent_Identity=35.0467289719626, Blast_Score=354, Evalue=2e-97,
Organism=Drosophila melanogaster, GI45550174, Length=631, Percent_Identity=33.5974643423138, Blast_Score=344, Evalue=2e-94,
Organism=Drosophila melanogaster, GI24643238, Length=558, Percent_Identity=34.4086021505376, Blast_Score=310, Evalue=5e-84,
Organism=Drosophila melanogaster, GI24585491, Length=609, Percent_Identity=30.3776683087028, Blast_Score=275, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24642763, Length=624, Percent_Identity=29.1666666666667, Blast_Score=231, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24641942, Length=476, Percent_Identity=31.7226890756302, Blast_Score=218, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24585920, Length=565, Percent_Identity=31.1504424778761, Blast_Score=217, Evalue=4e-56,
Organism=Drosophila melanogaster, GI17136342, Length=515, Percent_Identity=32.0388349514563, Blast_Score=217, Evalue=4e-56,
Organism=Drosophila melanogaster, GI17136508, Length=593, Percent_Identity=29.6795952782462, Blast_Score=204, Evalue=2e-52,
Organism=Drosophila melanogaster, GI17136242, Length=242, Percent_Identity=37.1900826446281, Blast_Score=156, Evalue=7e-38,
Organism=Drosophila melanogaster, GI24641139, Length=352, Percent_Identity=29.5454545454545, Blast_Score=135, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 146550; Mature: 146550

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSPLDALADQLDDVMLRDRQRLMRRLQGANKITQPDTLQATAATLAEEIARARQATANR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
RAACPAISYPPGLPVSQKSEALLAAIRDNQVVIVAGETGSGKTTQLPKMCLALGRGVRGM
CCCCCCCCCCCCCCCCCCHHHHHHEECCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHH
IGHSQPRRLAARSVAERIAHELDTPLGSCVGYKVRFSDRVGDNTLVKLMTDGILLAEIQQ
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCEEEEECCCCCCCHHHHHHHCCEEEEHHHH
DRLLMQYDTLIIDEAHERSLNIDFILGYLRQLLPRRPDLKVIITSATIDPQRFSHHFNNA
HHHHHHHHHHHEECHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCC
PIVEVSGRTYPVEVRYRPIADGEGDRDQTQAIIDAVDELRHEAPGDILIFMSGEREIRDT
CEEEECCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH
ADALTRLELSHTEVLPLYARLSAAEQNRVFHAHSGRRIVLATNVAETSLTVPGIKYVIDP
HHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCCEECCCEEEEECC
GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSDGICIRLYDEQDFLSRPAFTDP
CHHHHHHHHHHHHHHHCCCCCHHHCCCHHCCCCCCCCCCCEEEEEECCHHHHCCCCCCCH
EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAVTVNARGHQQLT
HHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCHHHHH
ALGRQLAQLPIDPRLARMVIEGERNGALREVMVIAAGLSIQDPRERPADRPQAADEKHRR
HHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
FSDKESDFLALVNLWNYLREQQQALSANQLRRLCKSEFLNYLRVREWQDIYTQLRQSVKS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFHINSTPADYRALHCALLSGLLSHLGQKDVEKQEFTGARNARFAIFPGSSLFKKPPKW
HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCHHHCCCCCH
AMVAELVETSRLWGRVAARIDPEWIEPLAQHLIKRSYSDPHWEKSQGAVMASEKVTLYGL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEEC
PIVNERRVNYGRIDPLLCRELFIRHALVQGEWQTKHAFMRANQRLRSEVEELEHKSRRRD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ILVDDETLFAFYDRRIGQEVVSVRHFDSWWKKAGAAQPELLNFEKSMLIKEGAARISAQD
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
YPNAWQQGNFRLRLSYQFEPGADADGVTVHIPLAILNQIGDSDFDWQIPGIRRERVMALI
CCCHHHCCCEEEEEEEEECCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
KSLPKPQRRNFVPAPNYADAFLARATPFELPLLESMERELRRMTGVTVSRDDWQLDQLPD
HHCCCCHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEECCCCCCHHHCCC
HLSVTFRVLDDRNRPLAEGKSLEALKQRLKDRVQQTLSAVADDGLEQAGLHLWSFGQLPQ
HHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCC
CHEQKRGGYAIKAYPALVDEKESVAIRLFETEQEQQQAMRTGLRRLLLLNIPSPVKYLHE
HHHHHCCCEEEEECHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KLPNKAKLGLYFNPYGKVLELIDDCIACGVDTLVARHGGAVWETTAFEMLHERVRGALNE
HCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
TVVAIAAQVERILTCANGINKRLKGRVDMTMALALSDIKAQMGGLIYRGFVTATGADRLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHH
DVERYLHAIERRLEKLGIDPHRDRAQMLRVEQVHQSWQQWLNRLPPVRRQAPEVQAIRWM
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHH
IEELRVSYFAQQLGTPYPVSDKRILQAMEAAEQP
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSPLDALADQLDDVMLRDRQRLMRRLQGANKITQPDTLQATAATLAEEIARARQATANR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
RAACPAISYPPGLPVSQKSEALLAAIRDNQVVIVAGETGSGKTTQLPKMCLALGRGVRGM
CCCCCCCCCCCCCCCCCCHHHHHHEECCCEEEEEECCCCCCCCCHHHHHHHHHCCCCHHH
IGHSQPRRLAARSVAERIAHELDTPLGSCVGYKVRFSDRVGDNTLVKLMTDGILLAEIQQ
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCEEEEECCCCCCCHHHHHHHCCEEEEHHHH
DRLLMQYDTLIIDEAHERSLNIDFILGYLRQLLPRRPDLKVIITSATIDPQRFSHHFNNA
HHHHHHHHHHHEECHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHCCCC
PIVEVSGRTYPVEVRYRPIADGEGDRDQTQAIIDAVDELRHEAPGDILIFMSGEREIRDT
CEEEECCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH
ADALTRLELSHTEVLPLYARLSAAEQNRVFHAHSGRRIVLATNVAETSLTVPGIKYVIDP
HHHHHHHHCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCCCCEECCCEEEEECC
GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSDGICIRLYDEQDFLSRPAFTDP
CHHHHHHHHHHHHHHHCCCCCHHHCCCHHCCCCCCCCCCCEEEEEECCHHHHCCCCCCCH
EILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAVTVNARGHQQLT
HHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEECCCCHHHHH
ALGRQLAQLPIDPRLARMVIEGERNGALREVMVIAAGLSIQDPRERPADRPQAADEKHRR
HHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
FSDKESDFLALVNLWNYLREQQQALSANQLRRLCKSEFLNYLRVREWQDIYTQLRQSVKS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFHINSTPADYRALHCALLSGLLSHLGQKDVEKQEFTGARNARFAIFPGSSLFKKPPKW
HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEECCCHHHCCCCCH
AMVAELVETSRLWGRVAARIDPEWIEPLAQHLIKRSYSDPHWEKSQGAVMASEKVTLYGL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEEC
PIVNERRVNYGRIDPLLCRELFIRHALVQGEWQTKHAFMRANQRLRSEVEELEHKSRRRD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ILVDDETLFAFYDRRIGQEVVSVRHFDSWWKKAGAAQPELLNFEKSMLIKEGAARISAQD
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
YPNAWQQGNFRLRLSYQFEPGADADGVTVHIPLAILNQIGDSDFDWQIPGIRRERVMALI
CCCHHHCCCEEEEEEEEECCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
KSLPKPQRRNFVPAPNYADAFLARATPFELPLLESMERELRRMTGVTVSRDDWQLDQLPD
HHCCCCHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEECCCCCCHHHCCC
HLSVTFRVLDDRNRPLAEGKSLEALKQRLKDRVQQTLSAVADDGLEQAGLHLWSFGQLPQ
HHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEECCCCCCC
CHEQKRGGYAIKAYPALVDEKESVAIRLFETEQEQQQAMRTGLRRLLLLNIPSPVKYLHE
HHHHHCCCEEEEECHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KLPNKAKLGLYFNPYGKVLELIDDCIACGVDTLVARHGGAVWETTAFEMLHERVRGALNE
HCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
TVVAIAAQVERILTCANGINKRLKGRVDMTMALALSDIKAQMGGLIYRGFVTATGADRLA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHH
DVERYLHAIERRLEKLGIDPHRDRAQMLRVEQVHQSWQQWLNRLPPVRRQAPEVQAIRWM
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHH
IEELRVSYFAQQLGTPYPVSDKRILQAMEAAEQP
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]