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The map label for this gene is ydbH [H]

Identifier: 238919835

GI number: 238919835

Start: 1865571

End: 1868174

Strand: Direct

Name: ydbH [H]

Synonym: NT01EI_1939

Alternate gene names: 238919835

Gene position: 1865571-1868174 (Clockwise)

Preceding gene: 238919833

Following gene: 238919836

Centisome position: 48.94

GC content: 65.17

Gene sequence:

>2604_bases
GTGAAAAAGCGACATGTCGGTGCGATAGGCGCTGCGGTTTTACTGTCGGGCGGTGTAGCGGCATGGTGGAGCTCGCCCTA
CTGGCTGTCCGCGGCGCTGCATCCCTGGTTGCCGACGGGCGCCGATGTGGTGATCCCTTCCCGGCCATACTGGTCCGACG
GCGCCCTGCGGTTACCTCGGTTGGACTACCATCAGGCAGCGTGCCCGCTGCTGAGTCTACGCGGCGCGGCGCTGAGTTAC
CGCCATTCACACTGGCAGCTCAATGCCGATACGGTCGATCTGGACAGTCGCTGTTTCTCCGCCGCGCCCAGCGGGGGCGC
CATGCCATCGCTCGCCTCGCTGCAGCACTCCCTTCCGCCCCTGACCCTGACCATCGGGCGTCTCAGTATCCTGCCGTGGC
AGCGCTATGGCGGGACGCTGCGGCTGAATAATCAGGACGGATCCCAGCGTATCGGCCTGGACGGTGAGCAGCTGACGCTG
GATTTGGCGCTGGAGCATCAGGCCCTGAGCGTCCGCTCGCTGCTGCTGCGGCTGCCGCAGCTCGATGATACCCTGCAGCT
ACAGGGGAAGATAGCGCTGGGGTTGGATCTTGCGACCGTGCCACCGGCGGGGCTGCTGCAGGCGCAGTTTCGCCTGTCCG
GGCTACCGCACCCTCTGCGCCTACGGCTGGTTTGGCAGCATCAGGGGGGGCGCCTGCTGCTCAACACGCCGGATCACTCC
CGTCCGCTGGTCGATCTGCCCTGGCAGCAGCAGCAGGGCGTGCTGACGGTCAGCGGCGGGCAGTGGTTTTGGCCCTATGG
TCCTCAGCCGCTGCAGGGCGGTGTTGCGCTGCAGTTGCGCGACTGGCTACAGGGATGGCGACATACCCAGCTGCGGGGAC
GGGTCAATATGCTGACGCGGGGGACGCAGGGAAAGGCCAACATGGTGATGCAGCTGGGGCCGGGGCGGCTGGATTTTCAG
GAGCGGGCTTTTCCCCTGCGCCTGAACGGCCTGGTCAATCATGGCGGACTGTCGCTTTCTGCCGCCCTCAATGCACAGGT
CAGCGGTACGCCCGGGGATCCCACCCTGAGGCTGTTGCCGGGCACGCTGCTGCGCATCTGGGGTAAAACCGATGCCCAGA
CCACCCTGCAGGAGGTGCGCTGGCCGCTGGCGGGGGTGTGCGTCAGCCGCGACGGCGTCAGCGGGCGTCTCCAGGCCATT
CTGCGCGTCAGCCACCGTTACTGGGGACAGGGGCAGCTGCACCTGGACGGCCAGGCCGAGGCGTTTCGCCCCGATAAGGG
GCTCTGGCGCTGGCATTACTGGGGAAAAGGGCAGATGCCGCCGCTACGGGCGCGCTGGGACGTTAGCGGGCAGGGCGCAT
GGCAGGGTGATGCGTTGCACCTGGACTATCTCTCCGCCGGCTTCGATCGCCTGACCTATGGGCTGGCACGTGTCGTCCGC
CCGCGTCTGACCCTGACCCAGCCGCTGATATGGCGGCGGGCGTCGCAGCATGCGGCATTCCGCGCCGGGTTTTCCCTTGC
CGCCCAGCGGATTGACTTTACTCACGGTGGTTATCTGCCCACGCCGCGCCTCCAGCTGACGGCGCAGGGCGAATCGCCCG
CAGCGATGCAGCTGCGCGGCGATCTGCGTGCCGACGCCATCGGTCCGATCCGGCTGGATGGACGTTGGGATGGTACACGT
CTGCGCGGTCAGGCCTGGTGGGACAGCCAGCCGGTCACGCTCTTTCAGCCGCTGCTGACGCCCTCGCTGGGGGTACGCCT
GCGCGAGGGGCAATTCCATGCCCAGGCGGCCTTTTCGGCGGCGCGTGGGCAGGGGTTTGTCGCCGGGGGGCATCTGCAGG
CCAAGGGCGTTGGTCTGTGGCTAAAGGATGGCACGGTGGACGGAATGGATCTGACGCTGCCTTACCGGCTGCACGACAGT
CGCTGGCAGCTCGGCCCGCATACGCCGGTCACCCTGCGTATCGATCGACTGGTCAATCAGTTCGATCTGCGGAAGATCCG
CGCCGATCTACAGGGTTATTACCCATATGACGAGAGCTACCCGCTGATCCTGAGCGACGTGACGACCGACATGCTGGGGG
GCGAGGCCGGTTTTTCCAGCCTGCGTCTGCCGCAGCATCAGCCCACGCTGTTGCGGTTGAATAATATTGAGCTGAGTGAG
CTGATCACCGCGCTGAAGGTGAAGCAGTTTGCCCTGTCGGGCAAGGTGGATGGCGAGCTGCCGTTTTATCTGCATAATCC
GCAGTGGATTATTCACCGCGGCTGGCTGGGTAACGCCCGTCCCGTCACGCTGCGTCTGGACAAGGATATGGTGGATGCCA
TCGTCAGCAATAACCCCATCGGCGGTGCGGCCCTTGACTGGCTGCGCTATCTGGAGGTGGGGCGCTCCCACACCTGGATC
GATCTCAGTAATCTGGGGGAGCTGACGCTGGATGCGACGCTTTACGGCATTAATCGACAGAAGGACCATCGGCGGGTTAT
CGAACTCAACTACCGCCAGCAGGAGAATGTATTCCAGCTGTGGCGCAGCCTGCGCTTCGGCGATAACGTACAGGAGTGGC
TGCAGTCCCGCCTCTCCCGGGCAACGAGGAGTCAGCATGAGTAA

Upstream 100 bases:

>100_bases
TGAATGGAAAGAGATTAATCCACTTCTATCAAGGGATATTTAGCTAAACTGGTAAGTATGGTATGGTGCGGCGCCGTGGC
GTAGCGGGTGGAGAGTACGA

Downstream 100 bases:

>100_bases
CCGTAATTTTGCGCTGCCGGCGTTGCTGCTGGCGCTGTGGGCCACAGGATGTACGCCGCGCATCGAGGTCGCGGCACCCA
CCCAGCCTATCACCATCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 867; Mature: 867

Protein sequence:

>867_residues
MKKRHVGAIGAAVLLSGGVAAWWSSPYWLSAALHPWLPTGADVVIPSRPYWSDGALRLPRLDYHQAACPLLSLRGAALSY
RHSHWQLNADTVDLDSRCFSAAPSGGAMPSLASLQHSLPPLTLTIGRLSILPWQRYGGTLRLNNQDGSQRIGLDGEQLTL
DLALEHQALSVRSLLLRLPQLDDTLQLQGKIALGLDLATVPPAGLLQAQFRLSGLPHPLRLRLVWQHQGGRLLLNTPDHS
RPLVDLPWQQQQGVLTVSGGQWFWPYGPQPLQGGVALQLRDWLQGWRHTQLRGRVNMLTRGTQGKANMVMQLGPGRLDFQ
ERAFPLRLNGLVNHGGLSLSAALNAQVSGTPGDPTLRLLPGTLLRIWGKTDAQTTLQEVRWPLAGVCVSRDGVSGRLQAI
LRVSHRYWGQGQLHLDGQAEAFRPDKGLWRWHYWGKGQMPPLRARWDVSGQGAWQGDALHLDYLSAGFDRLTYGLARVVR
PRLTLTQPLIWRRASQHAAFRAGFSLAAQRIDFTHGGYLPTPRLQLTAQGESPAAMQLRGDLRADAIGPIRLDGRWDGTR
LRGQAWWDSQPVTLFQPLLTPSLGVRLREGQFHAQAAFSAARGQGFVAGGHLQAKGVGLWLKDGTVDGMDLTLPYRLHDS
RWQLGPHTPVTLRIDRLVNQFDLRKIRADLQGYYPYDESYPLILSDVTTDMLGGEAGFSSLRLPQHQPTLLRLNNIELSE
LITALKVKQFALSGKVDGELPFYLHNPQWIIHRGWLGNARPVTLRLDKDMVDAIVSNNPIGGAALDWLRYLEVGRSHTWI
DLSNLGELTLDATLYGINRQKDHRRVIELNYRQQENVFQLWRSLRFGDNVQEWLQSRLSRATRSQHE

Sequences:

>Translated_867_residues
MKKRHVGAIGAAVLLSGGVAAWWSSPYWLSAALHPWLPTGADVVIPSRPYWSDGALRLPRLDYHQAACPLLSLRGAALSY
RHSHWQLNADTVDLDSRCFSAAPSGGAMPSLASLQHSLPPLTLTIGRLSILPWQRYGGTLRLNNQDGSQRIGLDGEQLTL
DLALEHQALSVRSLLLRLPQLDDTLQLQGKIALGLDLATVPPAGLLQAQFRLSGLPHPLRLRLVWQHQGGRLLLNTPDHS
RPLVDLPWQQQQGVLTVSGGQWFWPYGPQPLQGGVALQLRDWLQGWRHTQLRGRVNMLTRGTQGKANMVMQLGPGRLDFQ
ERAFPLRLNGLVNHGGLSLSAALNAQVSGTPGDPTLRLLPGTLLRIWGKTDAQTTLQEVRWPLAGVCVSRDGVSGRLQAI
LRVSHRYWGQGQLHLDGQAEAFRPDKGLWRWHYWGKGQMPPLRARWDVSGQGAWQGDALHLDYLSAGFDRLTYGLARVVR
PRLTLTQPLIWRRASQHAAFRAGFSLAAQRIDFTHGGYLPTPRLQLTAQGESPAAMQLRGDLRADAIGPIRLDGRWDGTR
LRGQAWWDSQPVTLFQPLLTPSLGVRLREGQFHAQAAFSAARGQGFVAGGHLQAKGVGLWLKDGTVDGMDLTLPYRLHDS
RWQLGPHTPVTLRIDRLVNQFDLRKIRADLQGYYPYDESYPLILSDVTTDMLGGEAGFSSLRLPQHQPTLLRLNNIELSE
LITALKVKQFALSGKVDGELPFYLHNPQWIIHRGWLGNARPVTLRLDKDMVDAIVSNNPIGGAALDWLRYLEVGRSHTWI
DLSNLGELTLDATLYGINRQKDHRRVIELNYRQQENVFQLWRSLRFGDNVQEWLQSRLSRATRSQHE
>Mature_867_residues
MKKRHVGAIGAAVLLSGGVAAWWSSPYWLSAALHPWLPTGADVVIPSRPYWSDGALRLPRLDYHQAACPLLSLRGAALSY
RHSHWQLNADTVDLDSRCFSAAPSGGAMPSLASLQHSLPPLTLTIGRLSILPWQRYGGTLRLNNQDGSQRIGLDGEQLTL
DLALEHQALSVRSLLLRLPQLDDTLQLQGKIALGLDLATVPPAGLLQAQFRLSGLPHPLRLRLVWQHQGGRLLLNTPDHS
RPLVDLPWQQQQGVLTVSGGQWFWPYGPQPLQGGVALQLRDWLQGWRHTQLRGRVNMLTRGTQGKANMVMQLGPGRLDFQ
ERAFPLRLNGLVNHGGLSLSAALNAQVSGTPGDPTLRLLPGTLLRIWGKTDAQTTLQEVRWPLAGVCVSRDGVSGRLQAI
LRVSHRYWGQGQLHLDGQAEAFRPDKGLWRWHYWGKGQMPPLRARWDVSGQGAWQGDALHLDYLSAGFDRLTYGLARVVR
PRLTLTQPLIWRRASQHAAFRAGFSLAAQRIDFTHGGYLPTPRLQLTAQGESPAAMQLRGDLRADAIGPIRLDGRWDGTR
LRGQAWWDSQPVTLFQPLLTPSLGVRLREGQFHAQAAFSAARGQGFVAGGHLQAKGVGLWLKDGTVDGMDLTLPYRLHDS
RWQLGPHTPVTLRIDRLVNQFDLRKIRADLQGYYPYDESYPLILSDVTTDMLGGEAGFSSLRLPQHQPTLLRLNNIELSE
LITALKVKQFALSGKVDGELPFYLHNPQWIIHRGWLGNARPVTLRLDKDMVDAIVSNNPIGGAALDWLRYLEVGRSHTWI
DLSNLGELTLDATLYGINRQKDHRRVIELNYRQQENVFQLWRSLRFGDNVQEWLQSRLSRATRSQHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787646, Length=832, Percent_Identity=43.3894230769231, Blast_Score=683, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021730 [H]

Pfam domain/function: PF11739 DctA-YdbH [H]

EC number: NA

Molecular weight: Translated: 96894; Mature: 96894

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRHVGAIGAAVLLSGGVAAWWSSPYWLSAALHPWLPTGADVVIPSRPYWSDGALRLPR
CCCCCCCHHHHHHHHCCCCHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCEECCC
LDYHQAACPLLSLRGAALSYRHSHWQLNADTVDLDSRCFSAAPSGGAMPSLASLQHSLPP
CCCHHHHCCHHHHCCCCEEEECCEEEECCCEECCCCHHHCCCCCCCCCCCHHHHHHCCCC
LTLTIGRLSILPWQRYGGTLRLNNQDGSQRIGLDGEQLTLDLALEHQALSVRSLLLRLPQ
EEEEECCEEEEEHHHCCCEEEECCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCC
LDDTLQLQGKIALGLDLATVPPAGLLQAQFRLSGLPHPLRLRLVWQHQGGRLLLNTPDHS
CCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEECCCCC
RPLVDLPWQQQQGVLTVSGGQWFWPYGPQPLQGGVALQLRDWLQGWRHTQLRGRVNMLTR
CCEEECCCCCCCCEEEECCCEEECCCCCCCCCCCEEEEEHHHHHHHHCHHHCCEEEEEEC
GTQGKANMVMQLGPGRLDFQERAFPLRLNGLVNHGGLSLSAALNAQVSGTPGDPTLRLLP
CCCCCCCEEEEECCCCCCHHHCCCEEEEECEEECCCEEEEEEEEEEECCCCCCCEEEECC
GTLLRIWGKTDAQTTLQEVRWPLAGVCVSRDGVSGRLQAILRVSHRYWGQGQLHLDGQAE
CEEEEEECCCCHHHHHHHHCCCHHEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCC
AFRPDKGLWRWHYWGKGQMPPLRARWDVSGQGAWQGDALHLDYLSAGFDRLTYGLARVVR
CCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHC
PRLTLTQPLIWRRASQHAAFRAGFSLAAQRIDFTHGGYLPTPRLQLTAQGESPAAMQLRG
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEECCCCCCEEEEEC
DLRADAIGPIRLDGRWDGTRLRGQAWWDSQPVTLFQPLLTPSLGVRLREGQFHAQAAFSA
CCCCCCCCCEEECCCCCCCEECCCCCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHHH
ARGQGFVAGGHLQAKGVGLWLKDGTVDGMDLTLPYRLHDSRWQLGPHTPVTLRIDRLVNQ
HCCCCEEECCEEEECEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCEEEEHHHHHHH
FDLRKIRADLQGYYPYDESYPLILSDVTTDMLGGEAGFSSLRLPQHQPTLLRLNNIELSE
HHHHHHHHHHCCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHH
LITALKVKQFALSGKVDGELPFYLHNPQWIIHRGWLGNARPVTLRLDKDMVDAIVSNNPI
HHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCCEEEEEECHHHHHHHHCCCCC
GGAALDWLRYLEVGRSHTWIDLSNLGELTLDATLYGINRQKDHRRVIELNYRQQENVFQL
CHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHHHH
WRSLRFGDNVQEWLQSRLSRATRSQHE
HHHHCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKRHVGAIGAAVLLSGGVAAWWSSPYWLSAALHPWLPTGADVVIPSRPYWSDGALRLPR
CCCCCCCHHHHHHHHCCCCHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCEECCC
LDYHQAACPLLSLRGAALSYRHSHWQLNADTVDLDSRCFSAAPSGGAMPSLASLQHSLPP
CCCHHHHCCHHHHCCCCEEEECCEEEECCCEECCCCHHHCCCCCCCCCCCHHHHHHCCCC
LTLTIGRLSILPWQRYGGTLRLNNQDGSQRIGLDGEQLTLDLALEHQALSVRSLLLRLPQ
EEEEECCEEEEEHHHCCCEEEECCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCC
LDDTLQLQGKIALGLDLATVPPAGLLQAQFRLSGLPHPLRLRLVWQHQGGRLLLNTPDHS
CCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEECCCCC
RPLVDLPWQQQQGVLTVSGGQWFWPYGPQPLQGGVALQLRDWLQGWRHTQLRGRVNMLTR
CCEEECCCCCCCCEEEECCCEEECCCCCCCCCCCEEEEEHHHHHHHHCHHHCCEEEEEEC
GTQGKANMVMQLGPGRLDFQERAFPLRLNGLVNHGGLSLSAALNAQVSGTPGDPTLRLLP
CCCCCCCEEEEECCCCCCHHHCCCEEEEECEEECCCEEEEEEEEEEECCCCCCCEEEECC
GTLLRIWGKTDAQTTLQEVRWPLAGVCVSRDGVSGRLQAILRVSHRYWGQGQLHLDGQAE
CEEEEEECCCCHHHHHHHHCCCHHEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCC
AFRPDKGLWRWHYWGKGQMPPLRARWDVSGQGAWQGDALHLDYLSAGFDRLTYGLARVVR
CCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHC
PRLTLTQPLIWRRASQHAAFRAGFSLAAQRIDFTHGGYLPTPRLQLTAQGESPAAMQLRG
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEECCCCCCEEEEEC
DLRADAIGPIRLDGRWDGTRLRGQAWWDSQPVTLFQPLLTPSLGVRLREGQFHAQAAFSA
CCCCCCCCCEEECCCCCCCEECCCCCCCCCCHHHHHHHCCCCCCCEEECCCCHHHHHHHH
ARGQGFVAGGHLQAKGVGLWLKDGTVDGMDLTLPYRLHDSRWQLGPHTPVTLRIDRLVNQ
HCCCCEEECCEEEECEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCEEEEHHHHHHH
FDLRKIRADLQGYYPYDESYPLILSDVTTDMLGGEAGFSSLRLPQHQPTLLRLNNIELSE
HHHHHHHHHHCCCCCCCCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHH
LITALKVKQFALSGKVDGELPFYLHNPQWIIHRGWLGNARPVTLRLDKDMVDAIVSNNPI
HHHHHHHHHHHCCCCCCCCCCEEEECCEEEEEECCCCCCCEEEEEECHHHHHHHHCCCCC
GGAALDWLRYLEVGRSHTWIDLSNLGELTLDATLYGINRQKDHRRVIELNYRQQENVFQL
CHHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCCCCCEEEEECCCCHHHHHHH
WRSLRFGDNVQEWLQSRLSRATRSQHE
HHHHCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 9025293 [H]