| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is zntB [H]
Identifier: 238919820
GI number: 238919820
Start: 1852932
End: 1853909
Strand: Direct
Name: zntB [H]
Synonym: NT01EI_1924
Alternate gene names: 238919820
Gene position: 1852932-1853909 (Clockwise)
Preceding gene: 238919819
Following gene: 238919822
Centisome position: 48.6
GC content: 64.62
Gene sequence:
>978_bases ATGGGCGCGGATCTGCCGCTGGAACAGGCGATATATGCCTTGCAACTGGACGGTCAGGGCGGCAGTCGGGCGCTGACGGA CCAGCTGCAGGCCTCGCTGGCGCAGCCGGCCTGGCTACACCTTGACTACCGCGAGGCGCCGATCCGCGACTGGCTGGCGA CAACGCCGCTGCTGCCGGATCCGCTGCGCCAAAGCCTGTCCGGGGAGAGCCTGCGCCCCCGGCTGACGCGTCAGGGGGAG GGGGTCCTGCTCACCCTGCGCAGCATCCATCCCGATCCGGCGGCTGATACGCACCCGGATCCGTGGGTGGTGCTGCGCAT GTATGTGACCGGTACGCTGATCCTCACCTCTGCGCATCGCGACAGTGCGACGCTGGCGCCAGTGGTGGAGGATTTACAGG GGGGCAGCGGCGCGGTGAACAGCGCGGGGCTGCTGGTTGCGATTGCCGATGCGCTGGTGGATCAGGTCAGCGATGCCATC GACGCGCGGCATGATGGCATCATCGAGATGGAGGATCGGCTGCTGGATCAGCATTTTCCTCCCCGCGGCGAGCTGGCGAT ACTGCGTAAGCAGCTGATCGTGATGCGTCGTTACCTGGCGCCGCAGCGCGATGTACTGGCGCGATTGGCCTGCGAGCGAT TGGGGTGGCTGGGCGATGACGATCGGCGTCGGCTGCAGGATATTGCCGATCGCCTCGGCCGCGGTCTGGAGGATTTGGAT AGCTGTATCGCCCGTACCGCGCTGCTGGCGGATGAGATCGCATCGCAGGTGGCCGACGCGCTGAACCGCCGCACCTATAC CATGTCACTGCTGGCGATGCTGTTTCTGCCTGCGACCTTTCTGACCGGCCTGTTCGGCGTCAACCTGGGGGGGATCCCCG GCAGCGAATCGCCGCTGGCGTTTGTGCTGTTTTGCCTGTTGCTGCTGATTTTGGCGTTTTGCGTTGTTATAGGGTTAAAA CGCAGTAAATGGCTGTAA
Upstream 100 bases:
>100_bases GTCGCCGCCATCAGGTGTGGCAGATCGATATCCGCGACGATCGCGGTCATCTGTGCTGCACCTCGCGCCTGACCACCGCG CTGCTGGAGAAGCGCCAGTG
Downstream 100 bases:
>100_bases TTTATCGTACTGGCAATCTTTGTGGCACGTCAAAGTTCAGGTGGTGAGCGGGGAAAAGCGCGGAGGAAATTGAGCGATAT CAAACTTCACTCGAAGTAGG
Product: zinc transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MGADLPLEQAIYALQLDGQGGSRALTDQLQASLAQPAWLHLDYREAPIRDWLATTPLLPDPLRQSLSGESLRPRLTRQGE GVLLTLRSIHPDPAADTHPDPWVVLRMYVTGTLILTSAHRDSATLAPVVEDLQGGSGAVNSAGLLVAIADALVDQVSDAI DARHDGIIEMEDRLLDQHFPPRGELAILRKQLIVMRRYLAPQRDVLARLACERLGWLGDDDRRRLQDIADRLGRGLEDLD SCIARTALLADEIASQVADALNRRTYTMSLLAMLFLPATFLTGLFGVNLGGIPGSESPLAFVLFCLLLLILAFCVVIGLK RSKWL
Sequences:
>Translated_325_residues MGADLPLEQAIYALQLDGQGGSRALTDQLQASLAQPAWLHLDYREAPIRDWLATTPLLPDPLRQSLSGESLRPRLTRQGE GVLLTLRSIHPDPAADTHPDPWVVLRMYVTGTLILTSAHRDSATLAPVVEDLQGGSGAVNSAGLLVAIADALVDQVSDAI DARHDGIIEMEDRLLDQHFPPRGELAILRKQLIVMRRYLAPQRDVLARLACERLGWLGDDDRRRLQDIADRLGRGLEDLD SCIARTALLADEIASQVADALNRRTYTMSLLAMLFLPATFLTGLFGVNLGGIPGSESPLAFVLFCLLLLILAFCVVIGLK RSKWL >Mature_324_residues GADLPLEQAIYALQLDGQGGSRALTDQLQASLAQPAWLHLDYREAPIRDWLATTPLLPDPLRQSLSGESLRPRLTRQGEG VLLTLRSIHPDPAADTHPDPWVVLRMYVTGTLILTSAHRDSATLAPVVEDLQGGSGAVNSAGLLVAIADALVDQVSDAID ARHDGIIEMEDRLLDQHFPPRGELAILRKQLIVMRRYLAPQRDVLARLACERLGWLGDDDRRRLQDIADRLGRGLEDLDS CIARTALLADEIASQVADALNRRTYTMSLLAMLFLPATFLTGLFGVNLGGIPGSESPLAFVLFCLLLLILAFCVVIGLKR SKWL
Specific function: Mediates efflux of zinc ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=324, Percent_Identity=55.5555555555556, Blast_Score=356, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 35571; Mature: 35439
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGADLPLEQAIYALQLDGQGGSRALTDQLQASLAQPAWLHLDYREAPIRDWLATTPLLPD CCCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCH PLRQSLSGESLRPRLTRQGEGVLLTLRSIHPDPAADTHPDPWVVLRMYVTGTLILTSAHR HHHHHCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCC DSATLAPVVEDLQGGSGAVNSAGLLVAIADALVDQVSDAIDARHDGIIEMEDRLLDQHFP CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC PRGELAILRKQLIVMRRYLAPQRDVLARLACERLGWLGDDDRRRLQDIADRLGRGLEDLD CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH SCIARTALLADEIASQVADALNRRTYTMSLLAMLFLPATFLTGLFGVNLGGIPGSESPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH FVLFCLLLLILAFCVVIGLKRSKWL HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GADLPLEQAIYALQLDGQGGSRALTDQLQASLAQPAWLHLDYREAPIRDWLATTPLLPD CCCCCHHHCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCH PLRQSLSGESLRPRLTRQGEGVLLTLRSIHPDPAADTHPDPWVVLRMYVTGTLILTSAHR HHHHHCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCC DSATLAPVVEDLQGGSGAVNSAGLLVAIADALVDQVSDAIDARHDGIIEMEDRLLDQHFP CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC PRGELAILRKQLIVMRRYLAPQRDVLARLACERLGWLGDDDRRRLQDIADRLGRGLEDLD CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH SCIARTALLADEIASQVADALNRRTYTMSLLAMLFLPATFLTGLFGVNLGGIPGSESPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH FVLFCLLLLILAFCVVIGLKRSKWL HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA