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The map label for this gene is ydiK [H]

Identifier: 238919816

GI number: 238919816

Start: 1848059

End: 1849156

Strand: Reverse

Name: ydiK [H]

Synonym: NT01EI_1920

Alternate gene names: 238919816

Gene position: 1849156-1848059 (Counterclockwise)

Preceding gene: 238919817

Following gene: 238919815

Centisome position: 48.5

GC content: 60.66

Gene sequence:

>1098_bases
ATGGATAAGCCACTACCGAAGTATGATTTGGCCCGGATTATTTTTGGGTCACTGTTTATTGCTCTGCTGATCATCTCCTG
TCTGTGGGTGGTTCAGCCGTTTATTCTGGGCTTTACCTGGGCCAGTATGGTGGTGATCGCGACCTGGCCGGTACTGATGT
GGCTGCAAAATCATCTGTGGGGAAAACGCTGGATGGCGGTCGTGCTGATGACCCTGCTGCTGCTGCTGCTGTTTGTGCTG
CCGATTGGTATGGTGATTACCAGCCTGATCGGCAACGCAGGTCCGATCCTTGACTGGGCAGCCAACGCCCGCAACTGGCA
AATGCCGCAGCTGGAGTGGCTGCAGACACTGCCGCTGATCGGCGCCAGGCTGTATGCCAGCTGGCAGGGGCTGATGAGCG
AAGGGGTTCTGGTCACCAAGATCCAGCCCTATATCGGCCAGGGGATCACCTGGTTTATTACCCAGGCGGCCCACGTCGGC
GGCTTCTTCCTGCACTGCTCTCTGATGCTGTTGTTCAGCGCCCTGCTGTATAGCCGGGGCGAGGATGTTGCCTTTGGCAT
CCGCCGCTTCGCTATCCGCCTGGCCGCCGACCGCGGCGATGCGGCGGTGATCCTGGGCGGTCAGGCCATTCGCGCCGTCG
CGCTGGGCGTCGTCGTCACCGCGCTGGCCCAATCGGTGCTGGCAGGCATCGGACTGGCGATCAGCGGTATTCACTATGCC
GTCCTGTTAACAGTGGTGATGTTTATCTGCTGTCTGGCACAGCTGGGCCCGTTGCTGGTGCTGATACCGGCCGTCGCCTG
GTTGTACTGGAGCGGTGATAACACCTGGGCAACGGTGCTGCTGGTGTGGAGCGGCGTCGTCGGCACCATGGATAACGTGC
TGCGTCCGGCGCTGATCCGCCTGGGCGCCGATCTGCCGATGCTGCTGGTGCTCTCCGGCGTTATCGGCGGTCTGCTGGCC
TTTGGCATGATCGGCCTGTTTATCGGCCCCGTCGTGCTGGCGGTCTCTTATCGTCTGGTTTCTGTCTGGATCAGCGAGGT
GCCTGCGCCGTTAAAAGATGCCCGGCAGGTCCACCGGGAGTTAGAGAAACGACAGTAA

Upstream 100 bases:

>100_bases
ACTGCCGCCGCTAAAGATCTGCATGCAGGCGCTGGGTTTTCCCACTATCCTGAGTCATCATAGGCACAGCGCACGCCGCC
GTGCACAATTGAGAGAGACT

Downstream 100 bases:

>100_bases
GATAATAGGCGGCGTCTGCCCGGTGAGCGCCGCCTAAAATGCGAGGATTTCCGCAGCGCTCACCGGATTAAAATAGCCGG
AATGAACGCTATCGGATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MDKPLPKYDLARIIFGSLFIALLIISCLWVVQPFILGFTWASMVVIATWPVLMWLQNHLWGKRWMAVVLMTLLLLLLFVL
PIGMVITSLIGNAGPILDWAANARNWQMPQLEWLQTLPLIGARLYASWQGLMSEGVLVTKIQPYIGQGITWFITQAAHVG
GFFLHCSLMLLFSALLYSRGEDVAFGIRRFAIRLAADRGDAAVILGGQAIRAVALGVVVTALAQSVLAGIGLAISGIHYA
VLLTVVMFICCLAQLGPLLVLIPAVAWLYWSGDNTWATVLLVWSGVVGTMDNVLRPALIRLGADLPMLLVLSGVIGGLLA
FGMIGLFIGPVVLAVSYRLVSVWISEVPAPLKDARQVHRELEKRQ

Sequences:

>Translated_365_residues
MDKPLPKYDLARIIFGSLFIALLIISCLWVVQPFILGFTWASMVVIATWPVLMWLQNHLWGKRWMAVVLMTLLLLLLFVL
PIGMVITSLIGNAGPILDWAANARNWQMPQLEWLQTLPLIGARLYASWQGLMSEGVLVTKIQPYIGQGITWFITQAAHVG
GFFLHCSLMLLFSALLYSRGEDVAFGIRRFAIRLAADRGDAAVILGGQAIRAVALGVVVTALAQSVLAGIGLAISGIHYA
VLLTVVMFICCLAQLGPLLVLIPAVAWLYWSGDNTWATVLLVWSGVVGTMDNVLRPALIRLGADLPMLLVLSGVIGGLLA
FGMIGLFIGPVVLAVSYRLVSVWISEVPAPLKDARQVHRELEKRQ
>Mature_365_residues
MDKPLPKYDLARIIFGSLFIALLIISCLWVVQPFILGFTWASMVVIATWPVLMWLQNHLWGKRWMAVVLMTLLLLLLFVL
PIGMVITSLIGNAGPILDWAANARNWQMPQLEWLQTLPLIGARLYASWQGLMSEGVLVTKIQPYIGQGITWFITQAAHVG
GFFLHCSLMLLFSALLYSRGEDVAFGIRRFAIRLAADRGDAAVILGGQAIRAVALGVVVTALAQSVLAGIGLAISGIHYA
VLLTVVMFICCLAQLGPLLVLIPAVAWLYWSGDNTWATVLLVWSGVVGTMDNVLRPALIRLGADLPMLLVLSGVIGGLLA
FGMIGLFIGPVVLAVSYRLVSVWISEVPAPLKDARQVHRELEKRQ

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=347, Percent_Identity=62.536023054755, Blast_Score=434, Evalue=1e-123,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39900; Mature: 39900

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKPLPKYDLARIIFGSLFIALLIISCLWVVQPFILGFTWASMVVIATWPVLMWLQNHLW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKRWMAVVLMTLLLLLLFVLPIGMVITSLIGNAGPILDWAANARNWQMPQLEWLQTLPLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHH
GARLYASWQGLMSEGVLVTKIQPYIGQGITWFITQAAHVGGFFLHCSLMLLFSALLYSRG
HHHHHHHHHHHHHCCEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDVAFGIRRFAIRLAADRGDAAVILGGQAIRAVALGVVVTALAQSVLAGIGLAISGIHYA
CHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLTVVMFICCLAQLGPLLVLIPAVAWLYWSGDNTWATVLLVWSGVVGTMDNVLRPALIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGADLPMLLVLSGVIGGLLAFGMIGLFIGPVVLAVSYRLVSVWISEVPAPLKDARQVHRE
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LEKRQ
HHHCC
>Mature Secondary Structure
MDKPLPKYDLARIIFGSLFIALLIISCLWVVQPFILGFTWASMVVIATWPVLMWLQNHLW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GKRWMAVVLMTLLLLLLFVLPIGMVITSLIGNAGPILDWAANARNWQMPQLEWLQTLPLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHH
GARLYASWQGLMSEGVLVTKIQPYIGQGITWFITQAAHVGGFFLHCSLMLLFSALLYSRG
HHHHHHHHHHHHHCCEEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EDVAFGIRRFAIRLAADRGDAAVILGGQAIRAVALGVVVTALAQSVLAGIGLAISGIHYA
CHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLTVVMFICCLAQLGPLLVLIPAVAWLYWSGDNTWATVLLVWSGVVGTMDNVLRPALIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LGADLPMLLVLSGVIGGLLAFGMIGLFIGPVVLAVSYRLVSVWISEVPAPLKDARQVHRE
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LEKRQ
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]