| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919780
Identifier: 238919780
GI number: 238919780
Start: 1815039
End: 1815254
Strand: Reverse
Name: 238919780
Synonym: NT01EI_1884
Alternate gene names: NA
Gene position: 1815254-1815039 (Counterclockwise)
Preceding gene: 238919792
Following gene: 238919779
Centisome position: 47.62
GC content: 53.7
Gene sequence:
>216_bases ATGGCTATCACCACGCTCCTGATGATGAAGCGCGTGTTCCATCTTTCTCGCCGGTATTTGCCCAGCCCGGTTGACTCAAT TTGTACGCTGATGGCTCTGCTGCTGTGCTGCCCAGACTACAGCGGTATCAGTCAGCGTACCAAGGCGGTTCACATCAGTT TTACAACACCACCCGTGGTGAAATCTCACATCGGGTCATCGATGCTACCGGTCTGA
Upstream 100 bases:
>100_bases TCGTAGTCCTGCCACCCTCTTTCAGGTAGACCGCAACCCGGTAGTATGGACTGACAGTGCACAGCCTGCAGGTCGTGGTC GACCGCGTCATGAGACCGAT
Downstream 100 bases:
>100_bases AGGTCTTATGGAAAGTCCGGCAGCATGGTGCTGATAGGCGCAGGATGTGGCGCAGGCTTCATCTGGCCGCAGATCGTGCA ACGCATGAGATTATCTGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MAITTLLMMKRVFHLSRRYLPSPVDSICTLMALLLCCPDYSGISQRTKAVHISFTTPPVVKSHIGSSMLPV
Sequences:
>Translated_71_residues MAITTLLMMKRVFHLSRRYLPSPVDSICTLMALLLCCPDYSGISQRTKAVHISFTTPPVVKSHIGSSMLPV >Mature_70_residues AITTLLMMKRVFHLSRRYLPSPVDSICTLMALLLCCPDYSGISQRTKAVHISFTTPPVVKSHIGSSMLPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7863; Mature: 7731
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 11.3 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 10.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITTLLMMKRVFHLSRRYLPSPVDSICTLMALLLCCPDYSGISQRTKAVHISFTTPPVV CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHH KSHIGSSMLPV HHHCCCCCCCC >Mature Secondary Structure AITTLLMMKRVFHLSRRYLPSPVDSICTLMALLLCCPDYSGISQRTKAVHISFTTPPVV HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHH KSHIGSSMLPV HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA