Click here to switch to the map view.

The map label for this gene is yqfB [C]

Identifier: 238919763

GI number: 238919763

Start: 1801652

End: 1801975

Strand: Direct

Name: yqfB [C]

Synonym: NT01EI_1867

Alternate gene names: 238919763

Gene position: 1801652-1801975 (Clockwise)

Preceding gene: 238919762

Following gene: 238919764

Centisome position: 47.26

GC content: 54.63

Gene sequence:

>324_bases
ATGAAGCCCGATATCACTTTTTATCGTCGCTTTCAGGCCGATATTTTGGCTGGGCGTAAGACGATTACCATCCGCGATGA
CAGTGAGTCTCACTTTCAGCCGGGACAGCGGCTCATGGTAGGACAGTATGAGGATGGGCGCCCCTTTTGTGAGATTGAGG
TGATTGGCGTAACCCCGGTGATGCTGGCGCAGCTGAATGCGCAGCATGCCGCTCAGGAAAACATGACGCTGGATGCGTTG
CGCAGCGTGATCGGGGAGATCTATCCGCAGATCGAGCGGCTTTATGTCATTTCATTTTCACTGGTACGTGCGCTGGCGGG
CTGA

Upstream 100 bases:

>100_bases
CGGTGTGGCCTCGGCGGGAGTGTGCGCCTATGCCGCCGCGCGGCGGGGCTGCAGAATATCATGCTGCTTTTTCCTGTTGA
ATAATGCGGTGGAGTAACAT

Downstream 100 bases:

>100_bases
GGTTCGACCCGCGACAGCGGGTGCAGATCCTATCACTTCCCCGCTGTCTGCCGCAGTCGGTGATACGCTCATCTGATAAG
GTGTGTAGCTAGCGTATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MKPDITFYRRFQADILAGRKTITIRDDSESHFQPGQRLMVGQYEDGRPFCEIEVIGVTPVMLAQLNAQHAAQENMTLDAL
RSVIGEIYPQIERLYVISFSLVRALAG

Sequences:

>Translated_107_residues
MKPDITFYRRFQADILAGRKTITIRDDSESHFQPGQRLMVGQYEDGRPFCEIEVIGVTPVMLAQLNAQHAAQENMTLDAL
RSVIGEIYPQIERLYVISFSLVRALAG
>Mature_107_residues
MKPDITFYRRFQADILAGRKTITIRDDSESHFQPGQRLMVGQYEDGRPFCEIEVIGVTPVMLAQLNAQHAAQENMTLDAL
RSVIGEIYPQIERLYVISFSLVRALAG

Specific function: Unknown

COG id: COG3097

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0267 family

Homologues:

Organism=Escherichia coli, GI1789267, Length=103, Percent_Identity=57.2815533980583, Blast_Score=119, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1867_EDWI9 (C5BGW5)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002933278.1
- ProteinModelPortal:   C5BGW5
- GeneID:   7961178
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_1867
- OMA:   RDEAESH
- ProtClustDB:   CLSK2813188
- HAMAP:   MF_00684
- InterPro:   IPR007374
- InterPro:   IPR015947
- InterPro:   IPR008314
- PIRSF:   PIRSF029143

Pfam domain/function: PF04266 ASCH; SSF88697 PUA-like

EC number: NA

Molecular weight: Translated: 12128; Mature: 12128

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDITFYRRFQADILAGRKTITIRDDSESHFQPGQRLMVGQYEDGRPFCEIEVIGVTPV
CCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCHH
MLAQLNAQHAAQENMTLDALRSVIGEIYPQIERLYVISFSLVRALAG
HHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPDITFYRRFQADILAGRKTITIRDDSESHFQPGQRLMVGQYEDGRPFCEIEVIGVTPV
CCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCHH
MLAQLNAQHAAQENMTLDALRSVIGEIYPQIERLYVISFSLVRALAG
HHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA