| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238919684
Identifier: 238919684
GI number: 238919684
Start: 1728053
End: 1728349
Strand: Direct
Name: 238919684
Synonym: NT01EI_1785
Alternate gene names: NA
Gene position: 1728053-1728349 (Clockwise)
Preceding gene: 238919683
Following gene: 238919685
Centisome position: 45.33
GC content: 51.18
Gene sequence:
>297_bases ATGGAGGAGGTTTCCTGTATTGCAGCCCCCCGTTTTTGCCGTAAACGTCTGATGAAGGTATCCACCGAACGGATTAACTT CAGCATCCTATTTCCATTCGTCAGGCTGGATGGGCGGGTGACGCGTGTTGGGCGCACCAGCCTGACGGTAAGCGTGGCCA TCTTCCTGGAAGAGATGTACCGCGAAGGGCAGGAAGCGGTGATTAACAGCCAGTTTAACTTCGTCGTGGCGTATGATGAT GGCCGTCCGTGCTATTGTTTGATTAATTATTCTCCTGATACGTCTACCAATAGGTAA
Upstream 100 bases:
>100_bases ATCAAACAAAAAATAACGCAATCGGTGACCCGCGTTGCTAATTTCCTGTTTCCTACCAGCATCAACCACTACGCTGTTTG GCGGCACTGCTCTGGCTTGG
Downstream 100 bases:
>100_bases AAATGTTAACTGGCTCCATAAACCGGACTCTTGCCCCCCTTTTTGGGTATGGCGGTGATAACATCCCTTAAGGCAATCGT AACAAGAGGTTAACGATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Long-Chain Acyl-CoA Thioester Hydrolase Protein; Thioesterase Superfamilyl Protein; Long-Chain Acyl-CoA Thioester Hydrolase Family Protein
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MEEVSCIAAPRFCRKRLMKVSTERINFSILFPFVRLDGRVTRVGRTSLTVSVAIFLEEMYREGQEAVINSQFNFVVAYDD GRPCYCLINYSPDTSTNR
Sequences:
>Translated_98_residues MEEVSCIAAPRFCRKRLMKVSTERINFSILFPFVRLDGRVTRVGRTSLTVSVAIFLEEMYREGQEAVINSQFNFVVAYDD GRPCYCLINYSPDTSTNR >Mature_98_residues MEEVSCIAAPRFCRKRLMKVSTERINFSILFPFVRLDGRVTRVGRTSLTVSVAIFLEEMYREGQEAVINSQFNFVVAYDD GRPCYCLINYSPDTSTNR
Specific function: Unknown
COG id: COG1607
COG function: function code I; Acyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11297; Mature: 11297
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEVSCIAAPRFCRKRLMKVSTERINFSILFPFVRLDGRVTRVGRTSLTVSVAIFLEEMY CCCCHHCCCCHHHHHHHHHHHHHHEEEEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHH REGQEAVINSQFNFVVAYDDGRPCYCLINYSPDTSTNR HCCCCEEECCCCCEEEEEECCCCEEEEEEECCCCCCCC >Mature Secondary Structure MEEVSCIAAPRFCRKRLMKVSTERINFSILFPFVRLDGRVTRVGRTSLTVSVAIFLEEMY CCCCHHCCCCHHHHHHHHHHHHHHEEEEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHH REGQEAVINSQFNFVVAYDDGRPCYCLINYSPDTSTNR HCCCCEEECCCCCEEEEEECCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA