| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yecJ [H]
Identifier: 238919596
GI number: 238919596
Start: 1655840
End: 1656091
Strand: Direct
Name: yecJ [H]
Synonym: NT01EI_1695
Alternate gene names: 238919596
Gene position: 1655840-1656091 (Clockwise)
Preceding gene: 238919595
Following gene: 238919599
Centisome position: 43.43
GC content: 51.98
Gene sequence:
>252_bases ATGTCGCAGATGTTGAATGAACGCGATGAGTTGGCCTCTGATCTGGTGGCCTGTCAGCTGGTGATTAAACAGATCCTGGA TGTGATCGAGGTGATCGCTCCAGCCGAAGTGCGTGCCAAGATGGCGCTGCAGCTGAAAAGCATTGATTTTAACCAGCCGG GTATCGATGAGGTGACCCAGCGCGGGGTACAGAAAGCCATCGCGTTGATTGAGCTAAAGTTCTCTCGGGAGCAGGAAAAC GTTGCACAATAA
Upstream 100 bases:
>100_bases GGTGGTGCGCGTTGGCGCCGGCGATCCCAAGCCCTTTCAATGAGGCAGGCGGCGTAGTCGCATGCTCTGTTAATTTGCCG TTGTTAATGAAGGAAACCCC
Downstream 100 bases:
>100_bases TGTGACATTAATCACGATTTTAATGAAAAACAATTGTTAAAAAAATGTGCCATGATAGAGTTTCTTTGTTGATTAATTTC GACATAGAGTTTCTCATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSQMLNERDELASDLVACQLVIKQILDVIEVIAPAEVRAKMALQLKSIDFNQPGIDEVTQRGVQKAIALIELKFSREQEN VAQ
Sequences:
>Translated_83_residues MSQMLNERDELASDLVACQLVIKQILDVIEVIAPAEVRAKMALQLKSIDFNQPGIDEVTQRGVQKAIALIELKFSREQEN VAQ >Mature_82_residues SQMLNERDELASDLVACQLVIKQILDVIEVIAPAEVRAKMALQLKSIDFNQPGIDEVTQRGVQKAIALIELKFSREQENV AQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081998, Length=82, Percent_Identity=67.0731707317073, Blast_Score=100, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020262 - ProDom: PD060536 [H]
Pfam domain/function: PF10964 DUF2766 [H]
EC number: NA
Molecular weight: Translated: 9293; Mature: 9162
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQMLNERDELASDLVACQLVIKQILDVIEVIAPAEVRAKMALQLKSIDFNQPGIDEVTQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHH RGVQKAIALIELKFSREQENVAQ HHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SQMLNERDELASDLVACQLVIKQILDVIEVIAPAEVRAKMALQLKSIDFNQPGIDEVTQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHH RGVQKAIALIELKFSREQENVAQ HHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]