| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is trpE [H]
Identifier: 238919593
GI number: 238919593
Start: 1652332
End: 1653906
Strand: Reverse
Name: trpE [H]
Synonym: NT01EI_1692
Alternate gene names: 238919593
Gene position: 1653906-1652332 (Counterclockwise)
Preceding gene: 238919597
Following gene: 238919592
Centisome position: 43.38
GC content: 65.97
Gene sequence:
>1575_bases ATGCCTCAGGCCAAAACCGCCGTGACCGTATTAACCCGCAGCGCCGCTTACTCCGCGGATCCTACGCTGCTTTTTGAACA ACTGTGCGCCCAGCGCCCGGCGACGCTGCTGCTGGAATCTGCCGATATCGCCAGTAAGCACCACCTGAAAAGTCTCCTGA TCATCGACAGCGCCCTGCGTATTACCGCGCGCGGGCGGGAGGTCACGCTGGAGTCCTTAAGCGCCAACGGCGCAGCCCTG CTGACCACCCTGCGCCATACCCTGCCTCCAGACGTAGCCTGTACGTGCCAGCCCCACGGTTGTACGCTCACCTTTCCCGC GCAGGACAATGAGCAGGATGAAGACAGCCGGCTGCACACCCTGTCGGTATTTGACGCCCTGCGAACTCTGCTTACCTGCC AGCCAACGCCTGACGCCGAGCCGGAGGCCATGTTGCTCGGCGGCCTGTTCGCCTATGATCTGGTCGCTGGCTTTGAGCCC TTGCCACAGCTCAGCGCAGGGCCGCGCTGCCCCGATCTCTGCTTTTATCTGGCCGAAACCCTACTGATCCTCGACCATCG TCAGGGCAGCGCCCGCCTGCAGGCCAGCCTCTTCAGCGCCGCATCGGATGAGCATCAGCGCCTGCAGCGGCGTCTGGATA CCCTGCTGACGGAGATGCTGCGCCCCTTCAAGACAGCGCCCGTTGCGCCCTGCCCGGCGTTAAAGGTCGAGGTCGATCGG GATGATGAGGCGTTCGCTACGATCGTCCGCGACATGCAGCGCGCCATTCTCGCCGGCGACATTTTTCAGGCGGTGCCCTC ACGCCGCTTCACACTGCCGTGTCCCGCGCCGCTGGCTGCCTACCGCCAGCTGAAGCAGAGTAATCCCAGCCCTTACATGT TCTTCATGCAGGATCAGGACTTCACGCTGTTCGGCGCCTCGCCGGAGAGTGCCCTGAAATACGATGCCGACAGCCGACGG GTCGAAATCTACCCCATCGCGGGCACCCGGCCGCGCGGGCGGCGCGCCGACGGCAGCATCGATCGCGATCTCGATGGCCG GCTGGAGCTGGACATGCGCAGCGATCCCAAAGAGCTGGCCGAACACCTGATGCTGGTCGATCTGGCGCGCAACGATCTGG CGCGGATCTGTGAGCCGGGCTCACGCTACGTCGCCGAGCTGACCAACGTGGATCGCTACTCCGTAGTGATGCATCTGGTC TCCCGGGTCGTCGGCACCCTGCGCGCCGATCTCGACGCGCTGCATGCCTACCGTGCCTGCATGAACATGGGCACCCTGAG CGGTGCCCCCAAAGTGCGCGCCATGCAGCTGATCGCCGCCTGCGAGCGGCGCCGGCGCGGCAGCTACGGCGGTGCCGTCG GCTACCTGACGGCCCGCGGCGATTTGGACACCTGCATCGTTATCCGCGCCGCCTACGTAGAGGACGGCGTCGCCAGCGTA CAGGCCGGCGCCGGCGTGGTGCTGGACTCCCAGCCTCAGGCGGAGGCCGATGAAACCCGCAGCAAGGCCCGGGCGGTGCT GAACGCCATCGCGGCGGCGCACCCGAACGCCCCCCAGCCGCAAGGAGCGATCTGA
Upstream 100 bases:
>100_bases CGGAATAAGCGCGCAGAAACCGTACGCCTGCGTTATTACCGCCCGCATAATGCGGGCTTTTTTATGTCCGCGCCGTGTAT GACCGTCAGGGAGCTATTCT
Downstream 100 bases:
>100_bases TGGCCGACGTCTTACTGCTCGACAATATTGACTCATTTACTTACAACCTGGTCGATCAGCTGCGCAGCGGCGGTCATCGG GTGGTTATCTACCGTAACAG
Product: anthranilate synthase component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 524; Mature: 523
Protein sequence:
>524_residues MPQAKTAVTVLTRSAAYSADPTLLFEQLCAQRPATLLLESADIASKHHLKSLLIIDSALRITARGREVTLESLSANGAAL LTTLRHTLPPDVACTCQPHGCTLTFPAQDNEQDEDSRLHTLSVFDALRTLLTCQPTPDAEPEAMLLGGLFAYDLVAGFEP LPQLSAGPRCPDLCFYLAETLLILDHRQGSARLQASLFSAASDEHQRLQRRLDTLLTEMLRPFKTAPVAPCPALKVEVDR DDEAFATIVRDMQRAILAGDIFQAVPSRRFTLPCPAPLAAYRQLKQSNPSPYMFFMQDQDFTLFGASPESALKYDADSRR VEIYPIAGTRPRGRRADGSIDRDLDGRLELDMRSDPKELAEHLMLVDLARNDLARICEPGSRYVAELTNVDRYSVVMHLV SRVVGTLRADLDALHAYRACMNMGTLSGAPKVRAMQLIAACERRRRGSYGGAVGYLTARGDLDTCIVIRAAYVEDGVASV QAGAGVVLDSQPQAEADETRSKARAVLNAIAAAHPNAPQPQGAI
Sequences:
>Translated_524_residues MPQAKTAVTVLTRSAAYSADPTLLFEQLCAQRPATLLLESADIASKHHLKSLLIIDSALRITARGREVTLESLSANGAAL LTTLRHTLPPDVACTCQPHGCTLTFPAQDNEQDEDSRLHTLSVFDALRTLLTCQPTPDAEPEAMLLGGLFAYDLVAGFEP LPQLSAGPRCPDLCFYLAETLLILDHRQGSARLQASLFSAASDEHQRLQRRLDTLLTEMLRPFKTAPVAPCPALKVEVDR DDEAFATIVRDMQRAILAGDIFQAVPSRRFTLPCPAPLAAYRQLKQSNPSPYMFFMQDQDFTLFGASPESALKYDADSRR VEIYPIAGTRPRGRRADGSIDRDLDGRLELDMRSDPKELAEHLMLVDLARNDLARICEPGSRYVAELTNVDRYSVVMHLV SRVVGTLRADLDALHAYRACMNMGTLSGAPKVRAMQLIAACERRRRGSYGGAVGYLTARGDLDTCIVIRAAYVEDGVASV QAGAGVVLDSQPQAEADETRSKARAVLNAIAAAHPNAPQPQGAI >Mature_523_residues PQAKTAVTVLTRSAAYSADPTLLFEQLCAQRPATLLLESADIASKHHLKSLLIIDSALRITARGREVTLESLSANGAALL TTLRHTLPPDVACTCQPHGCTLTFPAQDNEQDEDSRLHTLSVFDALRTLLTCQPTPDAEPEAMLLGGLFAYDLVAGFEPL PQLSAGPRCPDLCFYLAETLLILDHRQGSARLQASLFSAASDEHQRLQRRLDTLLTEMLRPFKTAPVAPCPALKVEVDRD DEAFATIVRDMQRAILAGDIFQAVPSRRFTLPCPAPLAAYRQLKQSNPSPYMFFMQDQDFTLFGASPESALKYDADSRRV EIYPIAGTRPRGRRADGSIDRDLDGRLELDMRSDPKELAEHLMLVDLARNDLARICEPGSRYVAELTNVDRYSVVMHLVS RVVGTLRADLDALHAYRACMNMGTLSGAPKVRAMQLIAACERRRRGSYGGAVGYLTARGDLDTCIVIRAAYVEDGVASVQ AGAGVVLDSQPQAEADETRSKARAVLNAIAAAHPNAPQPQGAI
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=514, Percent_Identity=68.0933852140078, Blast_Score=679, Evalue=0.0, Organism=Escherichia coli, GI1788114, Length=365, Percent_Identity=31.7808219178082, Blast_Score=166, Evalue=4e-42, Organism=Escherichia coli, GI87082077, Length=465, Percent_Identity=25.3763440860215, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786809, Length=228, Percent_Identity=31.5789473684211, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6320935, Length=377, Percent_Identity=36.3395225464191, Blast_Score=217, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6324361, Length=556, Percent_Identity=23.3812949640288, Blast_Score=96, Evalue=1e-20,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005257 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 57116; Mature: 56985
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQAKTAVTVLTRSAAYSADPTLLFEQLCAQRPATLLLESADIASKHHLKSLLIIDSALR CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEECCHHHHHHHHHHHHHHHHHHE ITARGREVTLESLSANGAALLTTLRHTLPPDVACTCQPHGCTLTFPAQDNEQDEDSRLHT EEECCCEEEEEHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCCHHHHHH LSVFDALRTLLTCQPTPDAEPEAMLLGGLFAYDLVAGFEPLPQLSAGPRCPDLCFYLAET HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH LLILDHRQGSARLQASLFSAASDEHQRLQRRLDTLLTEMLRPFKTAPVAPCPALKVEVDR HHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC DDEAFATIVRDMQRAILAGDIFQAVPSRRFTLPCPAPLAAYRQLKQSNPSPYMFFMQDQD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHCCCCCEEEEEECCC FTLFGASPESALKYDADSRRVEIYPIAGTRPRGRRADGSIDRDLDGRLELDMRSDPKELA EEEECCCCHHHHEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHH EHLMLVDLARNDLARICEPGSRYVAELTNVDRYSVVMHLVSRVVGTLRADLDALHAYRAC HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MNMGTLSGAPKVRAMQLIAACERRRRGSYGGAVGYLTARGDLDTCIVIRAAYVEDGVASV HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEHHHHCCHHHH QAGAGVVLDSQPQAEADETRSKARAVLNAIAAAHPNAPQPQGAI HCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PQAKTAVTVLTRSAAYSADPTLLFEQLCAQRPATLLLESADIASKHHLKSLLIIDSALR CCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHEEEECCHHHHHHHHHHHHHHHHHHE ITARGREVTLESLSANGAALLTTLRHTLPPDVACTCQPHGCTLTFPAQDNEQDEDSRLHT EEECCCEEEEEHHCCCCHHHHHHHHHHCCCCCEEEECCCCCEEEECCCCCCCCCHHHHHH LSVFDALRTLLTCQPTPDAEPEAMLLGGLFAYDLVAGFEPLPQLSAGPRCPDLCFYLAET HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH LLILDHRQGSARLQASLFSAASDEHQRLQRRLDTLLTEMLRPFKTAPVAPCPALKVEVDR HHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC DDEAFATIVRDMQRAILAGDIFQAVPSRRFTLPCPAPLAAYRQLKQSNPSPYMFFMQDQD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHCCCCCEEEEEECCC FTLFGASPESALKYDADSRRVEIYPIAGTRPRGRRADGSIDRDLDGRLELDMRSDPKELA EEEECCCCHHHHEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHH EHLMLVDLARNDLARICEPGSRYVAELTNVDRYSVVMHLVSRVVGTLRADLDALHAYRAC HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MNMGTLSGAPKVRAMQLIAACERRRRGSYGGAVGYLTARGDLDTCIVIRAAYVEDGVASV HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEHHHHCCHHHH QAGAGVVLDSQPQAEADETRSKARAVLNAIAAAHPNAPQPQGAI HCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11371633; 4598537; 366432; 7007652 [H]