Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919576

Identifier: 238919576

GI number: 238919576

Start: 1636707

End: 1637372

Strand: Direct

Name: 238919576

Synonym: NT01EI_1675

Alternate gene names: NA

Gene position: 1636707-1637372 (Clockwise)

Preceding gene: 238919573

Following gene: 238919577

Centisome position: 42.93

GC content: 32.28

Gene sequence:

>666_bases
ATGGAATATGCAATAAAGCAAATAATTAATGATTTTGAATCATTCGTGAAAAGTAAATCATTTTGTTGTATTGGAGCAAG
GAGAGCTCAGGCCGAAAATAACTTACTCTATTTCCCATCAATGCATCCGATTGAAGATATAAGTAATGTGTATTTGTTTT
TAGAGGATTTTGCATGTAACCAAATAAAAAATAAAAGATTTTATAGTGCTTTTTATAGTGCTGTTGTTTTTTTTGAAAAC
AAAAAGATTGCATCTGAAGATGATTTTGAAAATTTTCTCTGGGAAGTTCTTAAGGAATTGAATTCGATTGATTCACAAAA
ATACCAATGGGCCAGTGGATACTCAAGGAATACACGCGATGATAATTTTGCTTTTTCTATAGCAGAAGAAGCTTTTTTTA
TAGTCGGATTACATCCATTTGCACACAGACTAAGCAGGAACTTTAAGTGTCCAGCCTTGGTCTTTAATCATCATGAGATC
TTTTCCGCATTAAGGCTATCTGGTCATTTTGATAAATACAAGGCAGTTATAAGGAAAAATGAAATGCATATTCAGGGGAG
TGTTAATAGGCAATTGTCTGATTTCGGAAAAAATCAGAAGCTCCGCAATATGCCAGTGTTAACAAAGATATTTTTATCAA
AAATATGGTTTTCAAAGAGGCGTTAA

Upstream 100 bases:

>100_bases
CTGGGAAATACATATCTGTGTTTATCTTAAGTGAAGTCGTCTATTTTTTTCAAAAATATATATTTACTCTATTGTTATAA
ACATTAATTAATGGTGGCAT

Downstream 100 bases:

>100_bases
AAAATGACGGGTGGGTTTGCTACTGGTTTTTTCATCAGTTCAGGATTGCTGGTTGCCATTGGCGCACAAAATACTTTTGT
TATCCGGCAAGGAGTGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MEYAIKQIINDFESFVKSKSFCCIGARRAQAENNLLYFPSMHPIEDISNVYLFLEDFACNQIKNKRFYSAFYSAVVFFEN
KKIASEDDFENFLWEVLKELNSIDSQKYQWASGYSRNTRDDNFAFSIAEEAFFIVGLHPFAHRLSRNFKCPALVFNHHEI
FSALRLSGHFDKYKAVIRKNEMHIQGSVNRQLSDFGKNQKLRNMPVLTKIFLSKIWFSKRR

Sequences:

>Translated_221_residues
MEYAIKQIINDFESFVKSKSFCCIGARRAQAENNLLYFPSMHPIEDISNVYLFLEDFACNQIKNKRFYSAFYSAVVFFEN
KKIASEDDFENFLWEVLKELNSIDSQKYQWASGYSRNTRDDNFAFSIAEEAFFIVGLHPFAHRLSRNFKCPALVFNHHEI
FSALRLSGHFDKYKAVIRKNEMHIQGSVNRQLSDFGKNQKLRNMPVLTKIFLSKIWFSKRR
>Mature_221_residues
MEYAIKQIINDFESFVKSKSFCCIGARRAQAENNLLYFPSMHPIEDISNVYLFLEDFACNQIKNKRFYSAFYSAVVFFEN
KKIASEDDFENFLWEVLKELNSIDSQKYQWASGYSRNTRDDNFAFSIAEEAFFIVGLHPFAHRLSRNFKCPALVFNHHEI
FSALRLSGHFDKYKAVIRKNEMHIQGSVNRQLSDFGKNQKLRNMPVLTKIFLSKIWFSKRR

Specific function: Unknown

COG id: COG3403

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26094; Mature: 26094

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYAIKQIINDFESFVKSKSFCCIGARRAQAENNLLYFPSMHPIEDISNVYLFLEDFACN
CCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
QIKNKRFYSAFYSAVVFFENKKIASEDDFENFLWEVLKELNSIDSQKYQWASGYSRNTRD
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC
DNFAFSIAEEAFFIVGLHPFAHRLSRNFKCPALVFNHHEIFSALRLSGHFDKYKAVIRKN
CCCEEEEHHHEEEEEECCHHHHHHCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHC
EMHIQGSVNRQLSDFGKNQKLRNMPVLTKIFLSKIWFSKRR
CEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEYAIKQIINDFESFVKSKSFCCIGARRAQAENNLLYFPSMHPIEDISNVYLFLEDFACN
CCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHH
QIKNKRFYSAFYSAVVFFENKKIASEDDFENFLWEVLKELNSIDSQKYQWASGYSRNTRD
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC
DNFAFSIAEEAFFIVGLHPFAHRLSRNFKCPALVFNHHEIFSALRLSGHFDKYKAVIRKN
CCCEEEEHHHEEEEEECCHHHHHHCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHC
EMHIQGSVNRQLSDFGKNQKLRNMPVLTKIFLSKIWFSKRR
CEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA