| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919576
Identifier: 238919576
GI number: 238919576
Start: 1636707
End: 1637372
Strand: Direct
Name: 238919576
Synonym: NT01EI_1675
Alternate gene names: NA
Gene position: 1636707-1637372 (Clockwise)
Preceding gene: 238919573
Following gene: 238919577
Centisome position: 42.93
GC content: 32.28
Gene sequence:
>666_bases ATGGAATATGCAATAAAGCAAATAATTAATGATTTTGAATCATTCGTGAAAAGTAAATCATTTTGTTGTATTGGAGCAAG GAGAGCTCAGGCCGAAAATAACTTACTCTATTTCCCATCAATGCATCCGATTGAAGATATAAGTAATGTGTATTTGTTTT TAGAGGATTTTGCATGTAACCAAATAAAAAATAAAAGATTTTATAGTGCTTTTTATAGTGCTGTTGTTTTTTTTGAAAAC AAAAAGATTGCATCTGAAGATGATTTTGAAAATTTTCTCTGGGAAGTTCTTAAGGAATTGAATTCGATTGATTCACAAAA ATACCAATGGGCCAGTGGATACTCAAGGAATACACGCGATGATAATTTTGCTTTTTCTATAGCAGAAGAAGCTTTTTTTA TAGTCGGATTACATCCATTTGCACACAGACTAAGCAGGAACTTTAAGTGTCCAGCCTTGGTCTTTAATCATCATGAGATC TTTTCCGCATTAAGGCTATCTGGTCATTTTGATAAATACAAGGCAGTTATAAGGAAAAATGAAATGCATATTCAGGGGAG TGTTAATAGGCAATTGTCTGATTTCGGAAAAAATCAGAAGCTCCGCAATATGCCAGTGTTAACAAAGATATTTTTATCAA AAATATGGTTTTCAAAGAGGCGTTAA
Upstream 100 bases:
>100_bases CTGGGAAATACATATCTGTGTTTATCTTAAGTGAAGTCGTCTATTTTTTTCAAAAATATATATTTACTCTATTGTTATAA ACATTAATTAATGGTGGCAT
Downstream 100 bases:
>100_bases AAAATGACGGGTGGGTTTGCTACTGGTTTTTTCATCAGTTCAGGATTGCTGGTTGCCATTGGCGCACAAAATACTTTTGT TATCCGGCAAGGAGTGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MEYAIKQIINDFESFVKSKSFCCIGARRAQAENNLLYFPSMHPIEDISNVYLFLEDFACNQIKNKRFYSAFYSAVVFFEN KKIASEDDFENFLWEVLKELNSIDSQKYQWASGYSRNTRDDNFAFSIAEEAFFIVGLHPFAHRLSRNFKCPALVFNHHEI FSALRLSGHFDKYKAVIRKNEMHIQGSVNRQLSDFGKNQKLRNMPVLTKIFLSKIWFSKRR
Sequences:
>Translated_221_residues MEYAIKQIINDFESFVKSKSFCCIGARRAQAENNLLYFPSMHPIEDISNVYLFLEDFACNQIKNKRFYSAFYSAVVFFEN KKIASEDDFENFLWEVLKELNSIDSQKYQWASGYSRNTRDDNFAFSIAEEAFFIVGLHPFAHRLSRNFKCPALVFNHHEI FSALRLSGHFDKYKAVIRKNEMHIQGSVNRQLSDFGKNQKLRNMPVLTKIFLSKIWFSKRR >Mature_221_residues MEYAIKQIINDFESFVKSKSFCCIGARRAQAENNLLYFPSMHPIEDISNVYLFLEDFACNQIKNKRFYSAFYSAVVFFEN KKIASEDDFENFLWEVLKELNSIDSQKYQWASGYSRNTRDDNFAFSIAEEAFFIVGLHPFAHRLSRNFKCPALVFNHHEI FSALRLSGHFDKYKAVIRKNEMHIQGSVNRQLSDFGKNQKLRNMPVLTKIFLSKIWFSKRR
Specific function: Unknown
COG id: COG3403
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26094; Mature: 26094
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYAIKQIINDFESFVKSKSFCCIGARRAQAENNLLYFPSMHPIEDISNVYLFLEDFACN CCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHH QIKNKRFYSAFYSAVVFFENKKIASEDDFENFLWEVLKELNSIDSQKYQWASGYSRNTRD HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC DNFAFSIAEEAFFIVGLHPFAHRLSRNFKCPALVFNHHEIFSALRLSGHFDKYKAVIRKN CCCEEEEHHHEEEEEECCHHHHHHCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHC EMHIQGSVNRQLSDFGKNQKLRNMPVLTKIFLSKIWFSKRR CEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEYAIKQIINDFESFVKSKSFCCIGARRAQAENNLLYFPSMHPIEDISNVYLFLEDFACN CCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHH QIKNKRFYSAFYSAVVFFENKKIASEDDFENFLWEVLKELNSIDSQKYQWASGYSRNTRD HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC DNFAFSIAEEAFFIVGLHPFAHRLSRNFKCPALVFNHHEIFSALRLSGHFDKYKAVIRKN CCCEEEEHHHEEEEEECCHHHHHHCCCCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHC EMHIQGSVNRQLSDFGKNQKLRNMPVLTKIFLSKIWFSKRR CEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA