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The map label for this gene is ycgB [H]

Identifier: 238919535

GI number: 238919535

Start: 1591160

End: 1592698

Strand: Reverse

Name: ycgB [H]

Synonym: NT01EI_1631

Alternate gene names: 238919535

Gene position: 1592698-1591160 (Counterclockwise)

Preceding gene: 238919537

Following gene: 238919533

Centisome position: 41.78

GC content: 55.75

Gene sequence:

>1539_bases
ATGGCCAGGTCAAACGCTGCAACCCGTAACTCCGCGCCGTGCCTGAGCGATGGCCCGGACTGGACGTTTCCGCTGCTTCA
GACCTATCTGAATGAGATCGATCGGGTTGCCCGGCACTACCGGCTGGACACCTATCCGCACCAGATAGAAATCATTACCG
CCGAGCAGATGATGGACGCCTACTCCAGCGTCGGCATGCCGATCAACTATGCCCACTGGTCCTTCGGCAAAAAGTTTATC
GAGACCGAACAGCGCTATAAACATGGCCAGCAGGGATTGGCCTATGAGATCGTGATCAACTCGAATCCCTGTATCGCCTA
TCTGATGGAAGAGAACACCATTACCCTGCAGGCACTGGTAATGGCCCACGCCTGCTATGGCCATAACTCTTTCTTTAAGA
ATAACTATCTGTTCCGCACCTGGACCGATGCGGGCTCCATCATCGATTACCTGCTGTTTGCCCGTAACTATATCCGCCAG
TGCGAAGAGCGCTACGGCATCGAAGAGGTCGAGAAAATACTGGATTCCAGCCATGCGCTGATGAACTACGGTGTAGATCG
CTACAAACGACCGCAAAAAATCTCACTGGACGAGGAGCGCGCGCGCCAGAAGGCGCGCGAAGCCTATCTGCAGAGCCAGG
TCAACGATCTCTGGCGTACCCTACCGCGCCGGGAGGCCGGGATACTGGCCAGACAGGAGCAGCACTTCCCCAGCGAACCT
CAGGAGAATATTCTCTATTTCCTGGAAAAAAACGCGCCTCTGCTGGAATCATGGCAGCGGGAAATCGTGCGTATCGTGCG
TAAGATCAGCCAATACTTTTACCCGCAAAGGCAGACACAGGTCATGAATGAAGGCTGGGCCACCTTCTGGCACTATACCC
TGCTCAACCATCTCTACGACGAGGGGCGGGTCAGCGACCGCTTTATGCTGGAATTTCTGCACAGCCACACCAATGTGATC
ACCCAGCCATCCTATAACAGTCCCTATTACAGCGGCATCAACCCCTACGCTCTGGGATTCGCCATGTATCAAGATATTCG
GCGCATCTGTCAGCAGCCTACCCCTGAGGATCGGGAGTGGTTCCCCAATATCGCCGGGCGTGACTGGCTGGAAACGCTGC
ACTTCGCCATGCGTGATTTTAAGGATGAGAGCTTCATCAGCCAGTTCCTGTCGCCGCGTCTGATGCGCGAGTTCCACCTG
TTCAGCGTCCTGGACGACGAGCGTAATACCTATCTGGAGATTGAGGCCATCCATAACCAAGAGGGCTATCAGCTCCTGCG
GGAGCGGCTTTCATCCCAGTATAATCTGAGCAACCTCGAACCCAATATTCAGGTCTGGAACGTCGCACTGCGCGGCGATC
GCTCGCTGACCCTACGCTATATTCCCCATAACCGGACCCCGCTGGATACCGCCAGCCGCCGGGCGGTCATTAAGCATCTG
CAGCGACTGTGGGGCTTTGACGTCTATCTGGAGCAGGTAAACGAAGGTGGCGGCGTAGAGCTGCTGGAGCGATGCCCACC
GCATCCTGACGGGATCTAA

Upstream 100 bases:

>100_bases
CGCATGCTGTGGTAACCCGGCAGTTTTCAGTACGGTAGGCTACGCTTGTATCAGGACGGCATGCTGCGGTCCGTATAATA
AGCTTGAGGGAGGTGTATAC

Downstream 100 bases:

>100_bases
GTAAAGACCGGGGGGGCCAGGCGCCCCCGGTTAACGGAGATCTGATGAATGCTCCGCCTGATCAGGCGTGCCCATCGGCC
AAGTCGCGCGGGATCCCGCT

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MARSNAATRNSAPCLSDGPDWTFPLLQTYLNEIDRVARHYRLDTYPHQIEIITAEQMMDAYSSVGMPINYAHWSFGKKFI
ETEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITLQALVMAHACYGHNSFFKNNYLFRTWTDAGSIIDYLLFARNYIRQ
CEERYGIEEVEKILDSSHALMNYGVDRYKRPQKISLDEERARQKAREAYLQSQVNDLWRTLPRREAGILARQEQHFPSEP
QENILYFLEKNAPLLESWQREIVRIVRKISQYFYPQRQTQVMNEGWATFWHYTLLNHLYDEGRVSDRFMLEFLHSHTNVI
TQPSYNSPYYSGINPYALGFAMYQDIRRICQQPTPEDREWFPNIAGRDWLETLHFAMRDFKDESFISQFLSPRLMREFHL
FSVLDDERNTYLEIEAIHNQEGYQLLRERLSSQYNLSNLEPNIQVWNVALRGDRSLTLRYIPHNRTPLDTASRRAVIKHL
QRLWGFDVYLEQVNEGGGVELLERCPPHPDGI

Sequences:

>Translated_512_residues
MARSNAATRNSAPCLSDGPDWTFPLLQTYLNEIDRVARHYRLDTYPHQIEIITAEQMMDAYSSVGMPINYAHWSFGKKFI
ETEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITLQALVMAHACYGHNSFFKNNYLFRTWTDAGSIIDYLLFARNYIRQ
CEERYGIEEVEKILDSSHALMNYGVDRYKRPQKISLDEERARQKAREAYLQSQVNDLWRTLPRREAGILARQEQHFPSEP
QENILYFLEKNAPLLESWQREIVRIVRKISQYFYPQRQTQVMNEGWATFWHYTLLNHLYDEGRVSDRFMLEFLHSHTNVI
TQPSYNSPYYSGINPYALGFAMYQDIRRICQQPTPEDREWFPNIAGRDWLETLHFAMRDFKDESFISQFLSPRLMREFHL
FSVLDDERNTYLEIEAIHNQEGYQLLRERLSSQYNLSNLEPNIQVWNVALRGDRSLTLRYIPHNRTPLDTASRRAVIKHL
QRLWGFDVYLEQVNEGGGVELLERCPPHPDGI
>Mature_511_residues
ARSNAATRNSAPCLSDGPDWTFPLLQTYLNEIDRVARHYRLDTYPHQIEIITAEQMMDAYSSVGMPINYAHWSFGKKFIE
TEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITLQALVMAHACYGHNSFFKNNYLFRTWTDAGSIIDYLLFARNYIRQC
EERYGIEEVEKILDSSHALMNYGVDRYKRPQKISLDEERARQKAREAYLQSQVNDLWRTLPRREAGILARQEQHFPSEPQ
ENILYFLEKNAPLLESWQREIVRIVRKISQYFYPQRQTQVMNEGWATFWHYTLLNHLYDEGRVSDRFMLEFLHSHTNVIT
QPSYNSPYYSGINPYALGFAMYQDIRRICQQPTPEDREWFPNIAGRDWLETLHFAMRDFKDESFISQFLSPRLMREFHLF
SVLDDERNTYLEIEAIHNQEGYQLLRERLSSQYNLSNLEPNIQVWNVALRGDRSLTLRYIPHNRTPLDTASRRAVIKHLQ
RLWGFDVYLEQVNEGGGVELLERCPPHPDGI

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=507, Percent_Identity=79.2899408284024, Blast_Score=867, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 60615; Mature: 60484

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSNAATRNSAPCLSDGPDWTFPLLQTYLNEIDRVARHYRLDTYPHQIEIITAEQMMDA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
YSSVGMPINYAHWSFGKKFIETEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITLQALV
HHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHH
MAHACYGHNSFFKNNYLFRTWTDAGSIIDYLLFARNYIRQCEERYGIEEVEKILDSSHAL
HHHHHHCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHH
MNYGVDRYKRPQKISLDEERARQKAREAYLQSQVNDLWRTLPRREAGILARQEQHFPSEP
HHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
QENILYFLEKNAPLLESWQREIVRIVRKISQYFYPQRQTQVMNEGWATFWHYTLLNHLYD
HHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
EGRVSDRFMLEFLHSHTNVITQPSYNSPYYSGINPYALGFAMYQDIRRICQQPTPEDREW
CCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
FPNIAGRDWLETLHFAMRDFKDESFISQFLSPRLMREFHLFSVLDDERNTYLEIEAIHNQ
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEECCC
EGYQLLRERLSSQYNLSNLEPNIQVWNVALRGDRSLTLRYIPHNRTPLDTASRRAVIKHL
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHH
QRLWGFDVYLEQVNEGGGVELLERCPPHPDGI
HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
ARSNAATRNSAPCLSDGPDWTFPLLQTYLNEIDRVARHYRLDTYPHQIEIITAEQMMDA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
YSSVGMPINYAHWSFGKKFIETEQRYKHGQQGLAYEIVINSNPCIAYLMEENTITLQALV
HHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCCHHHHHHH
MAHACYGHNSFFKNNYLFRTWTDAGSIIDYLLFARNYIRQCEERYGIEEVEKILDSSHAL
HHHHHHCCCCHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHH
MNYGVDRYKRPQKISLDEERARQKAREAYLQSQVNDLWRTLPRREAGILARQEQHFPSEP
HHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
QENILYFLEKNAPLLESWQREIVRIVRKISQYFYPQRQTQVMNEGWATFWHYTLLNHLYD
HHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
EGRVSDRFMLEFLHSHTNVITQPSYNSPYYSGINPYALGFAMYQDIRRICQQPTPEDREW
CCCCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
FPNIAGRDWLETLHFAMRDFKDESFISQFLSPRLMREFHLFSVLDDERNTYLEIEAIHNQ
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEECCC
EGYQLLRERLSSQYNLSNLEPNIQVWNVALRGDRSLTLRYIPHNRTPLDTASRRAVIKHL
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHH
QRLWGFDVYLEQVNEGGGVELLERCPPHPDGI
HHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]