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The map label for this gene is ycgM [H]

Identifier: 238919529

GI number: 238919529

Start: 1585402

End: 1586058

Strand: Direct

Name: ycgM [H]

Synonym: NT01EI_1625

Alternate gene names: 238919529

Gene position: 1585402-1586058 (Clockwise)

Preceding gene: 238919528

Following gene: 238919530

Centisome position: 41.59

GC content: 60.12

Gene sequence:

>657_bases
ATGTATCAGCATCGTGATTGGCAGGGCGCCCTGCTTGAGTTAGCGGTCAGTAAGGTGGTCTGCGTCGGTAACAATTACCG
TGAGCATATCCGTGAGATGGGTAGCCAGGCCGCGCCGGAGCCCGTGCTGTTCCTCAAGCCGGAGAGTGCGCTGTGCGATC
TGCGTCAGCCAATCGTGATCCCCCACGGGCTGGGGGAGGTGCACCACGAGGTGGAGCTGGCGGTGCTGATCGGTATACCG
CTGAGCCAGGCGAATGACGATCGGGTGGCGCGCGCCATCGCCGGTTATGGTGTAGCGTTGGATCTCACCCTGCGCGACGT
GCAGCGCGAATGCAAAAAGCACGGCTATCCCTGGGAGAAGGCCAAGGCGTTTGATGGATCCTGCCCAATATCCGGTTTTA
TTCCTGAGAGCGAATTCGGCGATGCGCAAAACGCCGCTCTTACGCTGAGCGTTAACGGCGTATTGCGACAGTCTGGCAAT
ACGCGCGATATGCTGACGCCCATCCTGCCGTTGATTAGCTATATGAGCCGCTTCTTTACCCTGCGTGCCGGGGACGTGGT
GCTGACGGGGACGCCGGCCGGCGTCGGTCCGCTGCTCTCCGGCGACATGCTGACCATTGGTCTGAACGAGCGTATTCTGA
CGACCCGGATAATTTGA

Upstream 100 bases:

>100_bases
ATCACGATCTGCCCGGGGGGGCGCTTCCACCGCGATGGATAATCGATAGACTGATGATTCGGGTTGCCACAGGCGACCCC
AGCCTGAGGGGAGGTGAGGG

Downstream 100 bases:

>100_bases
GACCGCCGTGGAAGCGACGGTGAGGTACCCGCTATTGCTCAAGAGGCTTGCATCTGTCGCGTAAAGCGTCTATACAGAGC
GACTTTGATAGCACAGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MYQHRDWQGALLELAVSKVVCVGNNYREHIREMGSQAAPEPVLFLKPESALCDLRQPIVIPHGLGEVHHEVELAVLIGIP
LSQANDDRVARAIAGYGVALDLTLRDVQRECKKHGYPWEKAKAFDGSCPISGFIPESEFGDAQNAALTLSVNGVLRQSGN
TRDMLTPILPLISYMSRFFTLRAGDVVLTGTPAGVGPLLSGDMLTIGLNERILTTRII

Sequences:

>Translated_218_residues
MYQHRDWQGALLELAVSKVVCVGNNYREHIREMGSQAAPEPVLFLKPESALCDLRQPIVIPHGLGEVHHEVELAVLIGIP
LSQANDDRVARAIAGYGVALDLTLRDVQRECKKHGYPWEKAKAFDGSCPISGFIPESEFGDAQNAALTLSVNGVLRQSGN
TRDMLTPILPLISYMSRFFTLRAGDVVLTGTPAGVGPLLSGDMLTIGLNERILTTRII
>Mature_218_residues
MYQHRDWQGALLELAVSKVVCVGNNYREHIREMGSQAAPEPVLFLKPESALCDLRQPIVIPHGLGEVHHEVELAVLIGIP
LSQANDDRVARAIAGYGVALDLTLRDVQRECKKHGYPWEKAKAFDGSCPISGFIPESEFGDAQNAALTLSVNGVLRQSGN
TRDMLTPILPLISYMSRFFTLRAGDVVLTGTPAGVGPLLSGDMLTIGLNERILTTRII

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=191, Percent_Identity=45.5497382198953, Blast_Score=181, Evalue=3e-46,
Organism=Homo sapiens, GI215422413, Length=191, Percent_Identity=45.5497382198953, Blast_Score=181, Evalue=4e-46,
Organism=Homo sapiens, GI66348062, Length=191, Percent_Identity=45.5497382198953, Blast_Score=181, Evalue=5e-46,
Organism=Homo sapiens, GI156231349, Length=180, Percent_Identity=38.3333333333333, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI40786394, Length=180, Percent_Identity=37.2222222222222, Blast_Score=115, Evalue=4e-26,
Organism=Escherichia coli, GI1787428, Length=219, Percent_Identity=68.9497716894977, Blast_Score=314, Evalue=4e-87,
Organism=Caenorhabditis elegans, GI17557057, Length=196, Percent_Identity=44.3877551020408, Blast_Score=173, Evalue=8e-44,
Organism=Saccharomyces cerevisiae, GI6324161, Length=221, Percent_Identity=37.10407239819, Blast_Score=142, Evalue=4e-35,
Organism=Drosophila melanogaster, GI28571789, Length=194, Percent_Identity=38.659793814433, Blast_Score=142, Evalue=2e-34,
Organism=Drosophila melanogaster, GI28572127, Length=185, Percent_Identity=33.5135135135135, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24663695, Length=181, Percent_Identity=27.6243093922652, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 23769; Mature: 23769

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQHRDWQGALLELAVSKVVCVGNNYREHIREMGSQAAPEPVLFLKPESALCDLRQPIVI
CCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCEEE
PHGLGEVHHEVELAVLIGIPLSQANDDRVARAIAGYGVALDLTLRDVQRECKKHGYPWEK
ECCCCHHHHHEEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCHHH
AKAFDGSCPISGFIPESEFGDAQNAALTLSVNGVLRQSGNTRDMLTPILPLISYMSRFFT
HCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHE
LRAGDVVLTGTPAGVGPLLSGDMLTIGLNERILTTRII
EECCCEEEECCCCCCCCCCCCCEEEEECCCEEEEEECC
>Mature Secondary Structure
MYQHRDWQGALLELAVSKVVCVGNNYREHIREMGSQAAPEPVLFLKPESALCDLRQPIVI
CCCCCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCEEE
PHGLGEVHHEVELAVLIGIPLSQANDDRVARAIAGYGVALDLTLRDVQRECKKHGYPWEK
ECCCCHHHHHEEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCHHH
AKAFDGSCPISGFIPESEFGDAQNAALTLSVNGVLRQSGNTRDMLTPILPLISYMSRFFT
HCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECEEEECCCCCHHHHHHHHHHHHHHHHHHE
LRAGDVVLTGTPAGVGPLLSGDMLTIGLNERILTTRII
EECCCEEEECCCCCCCCCCCCCEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10806384 [H]