| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is zwf [H]
Identifier: 238919511
GI number: 238919511
Start: 1569478
End: 1570950
Strand: Direct
Name: zwf [H]
Synonym: NT01EI_1607
Alternate gene names: 238919511
Gene position: 1569478-1570950 (Clockwise)
Preceding gene: 238919508
Following gene: 238919512
Centisome position: 41.17
GC content: 58.32
Gene sequence:
>1473_bases ATGGCGGTAACGTCAACGGCACAGGCTTGCGACCTGATTATTTTTGGCGCCAAGGGCGATCTGGCCCGGCGCAAGCTGCT GCCTTCCCTGTATCAACTGGAAAAAGCTGGCCATATTCACCCCGAGACGCGCATTATCGGCGTCGGCCGCGCCGAGTGGG ATGCCGCGGCCTACCGTAAGGTGGTGCGTGAGGCGCTGGATACCTTTTTGAAGGAGCCGCTTGACGATGCACTGTGGCAG CGTCTGAGTGCCCGCCTCGACTTTTGCAACCTGGACGTCAACGATACCGAGCATTTTCAGCGTCTGGCGGAGAGGGTGGA GCCCCAGCAGCGGGTGACCATTAACTATTTTGCCATGCCGCCGAGTACCTTTGGCGCGATTTGCCAGGGGCTGGGACATG CGGGGATGAACCTCCAGCCCAGCCGTATCGTCATGGAGAAGCCGCTGGGGACCGATCTGGCCTCATCGCAGGCGATTAAC GATCAGGTAGCGCGCTATTTTGATGAAAATCAGGTATACCGCATCGACCATTATCTGGGTAAGGAGACGGTGCTGAACCT GCTGGCGCTGCGTTTTGCCAACGCGCTGTTTGCCAATAACTGGGACAACAGCATGATCGACCACGTGCAGATCACCGTGG CGGAAGAGGTCGGCATCGAAGGGCGCTGGGGCTATTTTGATCAGGCAGGACAGATGCGCGACATGGTACAGAACCATCTG CTGCAGATCCTGACCATGATCGCCATGGATCCGCCAGCGGACCTCTCCACCGACCGTATCCGCGATGAGAAGGTCAAGGT GCTGCGATCCCTACGCCGCATCAACCACAGCAACGTACGTGAGACAACGGTGCGCGGCCAGTACACCGCCGGCTTCGTGC AGGGACAGAAGGTGCCGGGATACCTGGAAGAAGAGGGGGCGAACAAGTGCAGCAATACGGAAACCTTTATTGCCATTCGC GTCGATATTGACAACTGGCGCTGGGCAGGGGTGCCGTTTTATCTGCGTACCGGTAAGCGCCTGCCGAGCAAGTGCTCTGA AGTGGTCATCTATTTCAAAAATCCACCGCTGAACCTGTTCAGCGACTCCTATCAGGCGCTGCCGCAGAATAAGTTGACCA TTCGCCTGCAGCCGGATGAAGGGGTACAGATCGATATTCTGAATAAGGTGCCGGGGCTGGAGCATAAACACCGTCTGCAG ACCACTAAGCTGGATCTGAGCTTCTCCGATACCTTCCATCAGGAGCATCTGGCAGACGCCTATGAACGCCTGCTGCTGGA GGCAATGCGCGGTATTCAGGCGCTGTTTGTCCGCCGCGATGAAGTGGAAGAGGCCTGGAAGTGGGTCGACTCCATCATGA CGGCCTGGGCCGACGACAACGACGCGCCGAAGCCTTATCAGGCGGGTACCTGGGGGCCGGTATCTTCGGTGGCGCTGATC ACCCGCGACGGCCGTTGCTGGAACGAATTCTGA
Upstream 100 bases:
>100_bases TATGGAAAGCGCAACGGAAAAGTCGTTTTTCTCGCTACAATCAGGATCATCAGAATGATTCTGTAAAAAAATTACAAGTA ACCTGCACGAGGAGAGAGAT
Downstream 100 bases:
>100_bases GTGGACTGTGCGGGGTGCAGGCCGCCCCGCGCAACGCGAGAGGAGCAGATATAAATGGCACACCTTATCGAATTTGGCAG CGCGGACGCGCTGAACATCC
Product: glucose-6-phosphate dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MAVTSTAQACDLIIFGAKGDLARRKLLPSLYQLEKAGHIHPETRIIGVGRAEWDAAAYRKVVREALDTFLKEPLDDALWQ RLSARLDFCNLDVNDTEHFQRLAERVEPQQRVTINYFAMPPSTFGAICQGLGHAGMNLQPSRIVMEKPLGTDLASSQAIN DQVARYFDENQVYRIDHYLGKETVLNLLALRFANALFANNWDNSMIDHVQITVAEEVGIEGRWGYFDQAGQMRDMVQNHL LQILTMIAMDPPADLSTDRIRDEKVKVLRSLRRINHSNVRETTVRGQYTAGFVQGQKVPGYLEEEGANKCSNTETFIAIR VDIDNWRWAGVPFYLRTGKRLPSKCSEVVIYFKNPPLNLFSDSYQALPQNKLTIRLQPDEGVQIDILNKVPGLEHKHRLQ TTKLDLSFSDTFHQEHLADAYERLLLEAMRGIQALFVRRDEVEEAWKWVDSIMTAWADDNDAPKPYQAGTWGPVSSVALI TRDGRCWNEF
Sequences:
>Translated_490_residues MAVTSTAQACDLIIFGAKGDLARRKLLPSLYQLEKAGHIHPETRIIGVGRAEWDAAAYRKVVREALDTFLKEPLDDALWQ RLSARLDFCNLDVNDTEHFQRLAERVEPQQRVTINYFAMPPSTFGAICQGLGHAGMNLQPSRIVMEKPLGTDLASSQAIN DQVARYFDENQVYRIDHYLGKETVLNLLALRFANALFANNWDNSMIDHVQITVAEEVGIEGRWGYFDQAGQMRDMVQNHL LQILTMIAMDPPADLSTDRIRDEKVKVLRSLRRINHSNVRETTVRGQYTAGFVQGQKVPGYLEEEGANKCSNTETFIAIR VDIDNWRWAGVPFYLRTGKRLPSKCSEVVIYFKNPPLNLFSDSYQALPQNKLTIRLQPDEGVQIDILNKVPGLEHKHRLQ TTKLDLSFSDTFHQEHLADAYERLLLEAMRGIQALFVRRDEVEEAWKWVDSIMTAWADDNDAPKPYQAGTWGPVSSVALI TRDGRCWNEF >Mature_489_residues AVTSTAQACDLIIFGAKGDLARRKLLPSLYQLEKAGHIHPETRIIGVGRAEWDAAAYRKVVREALDTFLKEPLDDALWQR LSARLDFCNLDVNDTEHFQRLAERVEPQQRVTINYFAMPPSTFGAICQGLGHAGMNLQPSRIVMEKPLGTDLASSQAIND QVARYFDENQVYRIDHYLGKETVLNLLALRFANALFANNWDNSMIDHVQITVAEEVGIEGRWGYFDQAGQMRDMVQNHLL QILTMIAMDPPADLSTDRIRDEKVKVLRSLRRINHSNVRETTVRGQYTAGFVQGQKVPGYLEEEGANKCSNTETFIAIRV DIDNWRWAGVPFYLRTGKRLPSKCSEVVIYFKNPPLNLFSDSYQALPQNKLTIRLQPDEGVQIDILNKVPGLEHKHRLQT TKLDLSFSDTFHQEHLADAYERLLLEAMRGIQALFVRRDEVEEAWKWVDSIMTAWADDNDAPKPYQAGTWGPVSSVALIT RDGRCWNEF
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI109389365, Length=479, Percent_Identity=36.5344467640919, Blast_Score=307, Evalue=2e-83, Organism=Homo sapiens, GI108773793, Length=479, Percent_Identity=36.5344467640919, Blast_Score=307, Evalue=2e-83, Organism=Homo sapiens, GI52145310, Length=500, Percent_Identity=27.6, Blast_Score=159, Evalue=6e-39, Organism=Escherichia coli, GI1788158, Length=490, Percent_Identity=81.8367346938776, Blast_Score=858, Evalue=0.0, Organism=Caenorhabditis elegans, GI17538218, Length=494, Percent_Identity=36.4372469635627, Blast_Score=305, Evalue=3e-83, Organism=Saccharomyces cerevisiae, GI6324088, Length=476, Percent_Identity=33.8235294117647, Blast_Score=275, Evalue=1e-74, Organism=Drosophila melanogaster, GI24643350, Length=471, Percent_Identity=36.3057324840764, Blast_Score=293, Evalue=1e-79, Organism=Drosophila melanogaster, GI24643352, Length=471, Percent_Identity=36.3057324840764, Blast_Score=293, Evalue=1e-79, Organism=Drosophila melanogaster, GI221513548, Length=488, Percent_Identity=29.0983606557377, Blast_Score=183, Evalue=3e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 55849; Mature: 55718
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTSTAQACDLIIFGAKGDLARRKLLPSLYQLEKAGHIHPETRIIGVGRAEWDAAAYRK CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHH VVREALDTFLKEPLDDALWQRLSARLDFCNLDVNDTEHFQRLAERVEPQQRVTINYFAMP HHHHHHHHHHHCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCCCEEEEEEEECC PSTFGAICQGLGHAGMNLQPSRIVMEKPLGTDLASSQAINDQVARYFDENQVYRIDHYLG CHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHC KETVLNLLALRFANALFANNWDNSMIDHVQITVAEEVGIEGRWGYFDQAGQMRDMVQNHL HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCHHCCHHHHHHHHHHH LQILTMIAMDPPADLSTDRIRDEKVKVLRSLRRINHSNVRETTVRGQYTAGFVQGQKVPG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCEEEHEEECCCCCC YLEEEGANKCSNTETFIAIRVDIDNWRWAGVPFYLRTGKRLPSKCSEVVIYFKNPPLNLF CHHHHCCCCCCCCCEEEEEEEEECCCEECCCCCEECCCCCCCCCCCEEEEEECCCCCCHH SDSYQALPQNKLTIRLQPDEGVQIDILNKVPGLEHKHRLQTTKLDLSFSDTFHQEHLADA CCHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHEEEEEEHHHHHHHHHHHHH YERLLLEAMRGIQALFVRRDEVEEAWKWVDSIMTAWADDNDAPKPYQAGTWGPVSSVALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE TRDGRCWNEF EECCCCCCCC >Mature Secondary Structure AVTSTAQACDLIIFGAKGDLARRKLLPSLYQLEKAGHIHPETRIIGVGRAEWDAAAYRK CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHH VVREALDTFLKEPLDDALWQRLSARLDFCNLDVNDTEHFQRLAERVEPQQRVTINYFAMP HHHHHHHHHHHCCHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHCCCCCEEEEEEEECC PSTFGAICQGLGHAGMNLQPSRIVMEKPLGTDLASSQAINDQVARYFDENQVYRIDHYLG CHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHC KETVLNLLALRFANALFANNWDNSMIDHVQITVAEEVGIEGRWGYFDQAGQMRDMVQNHL HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHCCCCCCCCCHHCCHHHHHHHHHHH LQILTMIAMDPPADLSTDRIRDEKVKVLRSLRRINHSNVRETTVRGQYTAGFVQGQKVPG HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHEECCCEEEHEEECCCCCC YLEEEGANKCSNTETFIAIRVDIDNWRWAGVPFYLRTGKRLPSKCSEVVIYFKNPPLNLF CHHHHCCCCCCCCCEEEEEEEEECCCEECCCCCEECCCCCCCCCCCEEEEEECCCCCCHH SDSYQALPQNKLTIRLQPDEGVQIDILNKVPGLEHKHRLQTTKLDLSFSDTFHQEHLADA CCHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHEEEEEEHHHHHHHHHHHHH YERLLLEAMRGIQALFVRRDEVEEAWKWVDSIMTAWADDNDAPKPYQAGTWGPVSSVALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE TRDGRCWNEF EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8145647 [H]