| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919450
Identifier: 238919450
GI number: 238919450
Start: 1510648
End: 1511433
Strand: Reverse
Name: 238919450
Synonym: NT01EI_1544
Alternate gene names: NA
Gene position: 1511433-1510648 (Counterclockwise)
Preceding gene: 238919451
Following gene: 238919445
Centisome position: 39.65
GC content: 36.77
Gene sequence:
>786_bases ATGAAAAAACTGATAATTCAGCTTACTCTTTTTCTCTTTTGTTTTCTTTCATTAGCCAATTCTTTTGCCGAAAATCTGCA AACCAGTGCATCGATAAGTATCATTGGTGCTATTGACGCAACCAATTCATGTAATACTTCAATAAAATCAATGAACAATA CATCAACATATACTTTGGCTAATATACAATGTACTTACCCCACCAGTGTTCAGGTGAGATATCAATCAAGTGCCGGCATT GTCACCCAGCACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAG TAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTA ACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGTAACAGCAACAGTAACAGTAACAGTAACAGTAACAGTAAC AGCAACAGTAACAGTAACAGTAACAGTAACAGTAATGACGACATCACCGCACTGACACCGCAAGAGGTGAAAGTCAGACC GGCCAGATCAAAAAAAATCGCATTTATTGTCAGTGAAACACCAGAAGTTCGCCAGCAAGAAGCCACCTATACCATTTCAA GCACCAGCGGAAATATATCCATAGTAAATCATAAAAATGAATATGTGGCTTACAAGCAATATAACATCCCGCTATCCATC ACAAAAAAAAATAGCGGTAACAAAAGTCAAAGTCACCGCATTACGGTTGAGCTGTACTTTCTATAA
Upstream 100 bases:
>100_bases ATTTAAAAGTTCAAGTTCTGCATGCCATAGACGATAAGGCTGTTTGTGGCTATAGTAGCGCCGACCAATACGTTCCCCTT TTCAATACCAGGAATCTTAG
Downstream 100 bases:
>100_bases TCTTATGCATTCTCTGGAGACATATGGGCTTTAGTTCCTATCCCTGTAGACCTATTTTGTTGCACCCAGTTTGGATACCG ACAGCGCGCAACAACCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKKLIIQLTLFLFCFLSLANSFAENLQTSASISIIGAIDATNSCNTSIKSMNNTSTYTLANIQCTYPTSVQVRYQSSAGI VTQHSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSN SNSNSNSNSNSNDDITALTPQEVKVRPARSKKIAFIVSETPEVRQQEATYTISSTSGNISIVNHKNEYVAYKQYNIPLSI TKKNSGNKSQSHRITVELYFL
Sequences:
>Translated_261_residues MKKLIIQLTLFLFCFLSLANSFAENLQTSASISIIGAIDATNSCNTSIKSMNNTSTYTLANIQCTYPTSVQVRYQSSAGI VTQHSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSN SNSNSNSNSNSNDDITALTPQEVKVRPARSKKIAFIVSETPEVRQQEATYTISSTSGNISIVNHKNEYVAYKQYNIPLSI TKKNSGNKSQSHRITVELYFL >Mature_261_residues MKKLIIQLTLFLFCFLSLANSFAENLQTSASISIIGAIDATNSCNTSIKSMNNTSTYTLANIQCTYPTSVQVRYQSSAGI VTQHSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSN SNSNSNSNSNSNDDITALTPQEVKVRPARSKKIAFIVSETPEVRQQEATYTISSTSGNISIVNHKNEYVAYKQYNIPLSI TKKNSGNKSQSHRITVELYFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28063; Mature: 28063
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIIQLTLFLFCFLSLANSFAENLQTSASISIIGAIDATNSCNTSIKSMNNTSTYTLA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHCCCCCCEEEEE NIQCTYPTSVQVRYQSSAGIVTQHSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSN EEEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNDDITALTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC QEVKVRPARSKKIAFIVSETPEVRQQEATYTISSTSGNISIVNHKNEYVAYKQYNIPLSI CCEEEEECCCCEEEEEEECCCHHHHCCCEEEEECCCCCEEEEECCCCEEEEEEECCCEEE TKKNSGNKSQSHRITVELYFL EECCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MKKLIIQLTLFLFCFLSLANSFAENLQTSASISIIGAIDATNSCNTSIKSMNNTSTYTLA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHCCCCCCEEEEE NIQCTYPTSVQVRYQSSAGIVTQHSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSN EEEEECCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNDDITALTP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC QEVKVRPARSKKIAFIVSETPEVRQQEATYTISSTSGNISIVNHKNEYVAYKQYNIPLSI CCEEEEECCCCEEEEEEECCCHHHHCCCEEEEECCCCCEEEEECCCCEEEEEEECCCEEE TKKNSGNKSQSHRITVELYFL EECCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA