Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919446

Identifier: 238919446

GI number: 238919446

Start: 1505165

End: 1506037

Strand: Direct

Name: 238919446

Synonym: NT01EI_1540

Alternate gene names: NA

Gene position: 1505165-1506037 (Clockwise)

Preceding gene: 238919444

Following gene: 238919447

Centisome position: 39.48

GC content: 45.48

Gene sequence:

>873_bases
TTGAATAGTAACGAATTTATTTTTTTTAAAAACTTACTTGAATATATTTATTTATATTCCTATAAATTAATTGTGCCTGA
TGAAGGCGCTCTGGTAAAAGTAGCAGCAAGACAGATTGTAATGGTTTTCGATGTGTTATATCCGGACTCACTTAATCGCA
AAGGTGTTACTATGAAAAAACTTCATGCTATCGCACTGTTAGTAGCCACCGCCGGAACTGCATTGATGGCAACTAATGTA
TCAGCTGAAACTCTGGCTGGCTCTGCAACTGTCAGTATCACTGGCTCCATTAATGGCGCCAATACCTGTACCATTGCAGT
AGACGGCGGTGGGGTGCTCGATGTGGGAACCCGCAGCGTGGCTGACCTGAATGCGCCAAATGGTGATATTATGGGTTCAA
TGAAAGCCTTTAATGCGACCGTAAACTGCACATTCCCGGTGGCTACGGCCGTCAAATTTAGCAGTTCTCTGCCAAACAGC
GCTGCTGCAGCCCATAAATTTGGTCTTGTCAGAACCAGCACCAACAAAGATGCTGCCCACGTTTATGCAGATATCGGGGC
TACAGGGCCAACAGCAGGAGGTGCATCTGCATGGTACGCTGCAATCGGCAACCAGACACTGTCCAGTGTAAGTACCAGCA
GTACATTTACCGGTGCACCAAACTATAGTGTTATTAAAAGTTTGGCCGGAGACTCCAATAATATTTTTACCGTAGTAGAT
ACTAACGCCCATCCCATTTCAGCTACCACATTCGTCTATCCATTCCGTGTCGGTATGTACTATGACCCGCTGGCAAGCGG
ATGGAAAAACGATATTCAGGGTACTACGCTGTCCCTGAACAATACCATGACGCTGGAGCTTTACACCCTGTAA

Upstream 100 bases:

>100_bases
TCATCTTAATTATGTGTTATTCATTATTTTTTGGTTTTTTTGTTTTGGTAAGTAACCGTTTGCCTAGAAAAATATTTTTA
TTTTTTTATTGTGTATATTG

Downstream 100 bases:

>100_bases
AGGATTCATCTTCCTCTAAATGCTTATCCTAAGCAAGGCGGTTTCCGCCTTGCTTATTTAACCACGATGACGTAATGAGA
TTATAATTGGGGTATAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNSNEFIFFKNLLEYIYLYSYKLIVPDEGALVKVAARQIVMVFDVLYPDSLNRKGVTMKKLHAIALLVATAGTALMATNV
SAETLAGSATVSITGSINGANTCTIAVDGGGVLDVGTRSVADLNAPNGDIMGSMKAFNATVNCTFPVATAVKFSSSLPNS
AAAAHKFGLVRTSTNKDAAHVYADIGATGPTAGGASAWYAAIGNQTLSSVSTSSTFTGAPNYSVIKSLAGDSNNIFTVVD
TNAHPISATTFVYPFRVGMYYDPLASGWKNDIQGTTLSLNNTMTLELYTL

Sequences:

>Translated_290_residues
MNSNEFIFFKNLLEYIYLYSYKLIVPDEGALVKVAARQIVMVFDVLYPDSLNRKGVTMKKLHAIALLVATAGTALMATNV
SAETLAGSATVSITGSINGANTCTIAVDGGGVLDVGTRSVADLNAPNGDIMGSMKAFNATVNCTFPVATAVKFSSSLPNS
AAAAHKFGLVRTSTNKDAAHVYADIGATGPTAGGASAWYAAIGNQTLSSVSTSSTFTGAPNYSVIKSLAGDSNNIFTVVD
TNAHPISATTFVYPFRVGMYYDPLASGWKNDIQGTTLSLNNTMTLELYTL
>Mature_290_residues
MNSNEFIFFKNLLEYIYLYSYKLIVPDEGALVKVAARQIVMVFDVLYPDSLNRKGVTMKKLHAIALLVATAGTALMATNV
SAETLAGSATVSITGSINGANTCTIAVDGGGVLDVGTRSVADLNAPNGDIMGSMKAFNATVNCTFPVATAVKFSSSLPNS
AAAAHKFGLVRTSTNKDAAHVYADIGATGPTAGGASAWYAAIGNQTLSSVSTSSTFTGAPNYSVIKSLAGDSNNIFTVVD
TNAHPISATTFVYPFRVGMYYDPLASGWKNDIQGTTLSLNNTMTLELYTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30334; Mature: 30334

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNEFIFFKNLLEYIYLYSYKLIVPDEGALVKVAARQIVMVFDVLYPDSLNRKGVTMKK
CCCCCEEEHHHHHHHHHHHEEEEEECCCCCEEEHHHHHHEEEHEECCCCCCCCCCCHHHH
LHAIALLVATAGTALMATNVSAETLAGSATVSITGSINGANTCTIAVDGGGVLDVGTRSV
HHHHHHHHHHCCCEEEEECCCHHHCCCCEEEEEEECCCCCCEEEEEECCCCEEECCCCCE
ADLNAPNGDIMGSMKAFNATVNCTFPVATAVKFSSSLPNSAAAAHKFGLVRTSTNKDAAH
EECCCCCCCEEECHHHCCEEEEEEECHHEEEECCCCCCCCHHHHHHEEEEEECCCCCCEE
VYADIGATGPTAGGASAWYAAIGNQTLSSVSTSSTFTGAPNYSVIKSLAGDSNNIFTVVD
EEEECCCCCCCCCCCHHHHHHHCCHHHHHCCCCCEECCCCCHHHHHHHCCCCCCEEEEEE
TNAHPISATTFVYPFRVGMYYDPLASGWKNDIQGTTLSLNNTMTLELYTL
CCCCCCEEEEEEEEEEECEEECCHHCCCCCCCCCCEEEECCEEEEEEEEC
>Mature Secondary Structure
MNSNEFIFFKNLLEYIYLYSYKLIVPDEGALVKVAARQIVMVFDVLYPDSLNRKGVTMKK
CCCCCEEEHHHHHHHHHHHEEEEEECCCCCEEEHHHHHHEEEHEECCCCCCCCCCCHHHH
LHAIALLVATAGTALMATNVSAETLAGSATVSITGSINGANTCTIAVDGGGVLDVGTRSV
HHHHHHHHHHCCCEEEEECCCHHHCCCCEEEEEEECCCCCCEEEEEECCCCEEECCCCCE
ADLNAPNGDIMGSMKAFNATVNCTFPVATAVKFSSSLPNSAAAAHKFGLVRTSTNKDAAH
EECCCCCCCEEECHHHCCEEEEEEECHHEEEECCCCCCCCHHHHHHEEEEEECCCCCCEE
VYADIGATGPTAGGASAWYAAIGNQTLSSVSTSSTFTGAPNYSVIKSLAGDSNNIFTVVD
EEEECCCCCCCCCCCHHHHHHHCCHHHHHCCCCCEECCCCCHHHHHHHCCCCCCEEEEEE
TNAHPISATTFVYPFRVGMYYDPLASGWKNDIQGTTLSLNNTMTLELYTL
CCCCCCEEEEEEEEEEECEEECCHHCCCCCCCCCCEEEECCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA