Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919427

Identifier: 238919427

GI number: 238919427

Start: 1486644

End: 1487723

Strand: Reverse

Name: 238919427

Synonym: NT01EI_1521

Alternate gene names: NA

Gene position: 1487723-1486644 (Counterclockwise)

Preceding gene: 238919436

Following gene: 238919426

Centisome position: 39.02

GC content: 41.3

Gene sequence:

>1080_bases
ATGGAAACACGATTTAACTTACCTACCCATACTGTCGAAAGCTTCATAAGTACTGAGCAGTTCAGCGACATTCGAAAGAA
TAAACAGGAATGTATCTTGCAGTTGTCAGATGGGTCCTACAAAATCAGCTGGCATCAGAATCATCCCCACGTTGATAGCA
GTGATAACGGGATCCTTACTGGCATCAAAAACTTATTTGCTTATTTTTTTTCTGGCGAAACCTGCGCAGGCCGATTGCAG
AACACGTTGGAGATTCCTGGCAAGGCAATCTTCATTCCAAACCCGACAATAGACATGCTCGAGTTGACCTGTTACGAGAA
TCAAATAATGATGAACAAAGGGAAAGACATGATACCTCTGATAGTAAACAGCAAGGCAGACGTCGATAAGCTTGAAGTGG
CCAGAGCGCAATTACTTGAAATACTTAATAAAGATTTAAAGGATGTAGATAGCCATGAAAACAGAAAAAAAATATCAGCA
TTGCAAAACACAAAAATACTAGAAAAATCAGTCCTAAAAAATATTAGGGGTGACGATAAGCTTTATATATTGGGCCATGG
ACACGTCGCTGGGGAGTATATTGGGAATGAAAGGTTTGACGTAAACTATCTAAGCCATTTATATAGTTGCAGCCAGCAAA
GTCATACTTCTCCTGCCTGTAAAGCAGACATTGAATGCAGCCTCGAGAAGGATGAGTATTCAACTCCAGAAGCCGTCGCA
AAATCATTGAAAGGATTCGTTCCTCGTGACTTTTCTCGATTTTACACACTGACCTGCCACAGCGGTGAAGCCAGGCGCCC
TATTTCGCTATCAGATGAAGATCTAAAAAAGGCAGCTCAGCCCGACTTGGAAGGAGATGGAAAATTGGCCTATGCACATA
GGTTTTTTAATGCGTTACATAGCGAAGGTTTTACTCAACCTCAAGTCACTGGTTATATCGGTGCCGTCTGCATTACTCCT
AATGATAACAAGCACACCTGTGAAGTCACTCTGGCTGATGGATCATTGCATGATGACATTCCGAGAAGTGATTTGAAACA
CGTGTTTTCCCATGAAGTTCATGACGTTAATAAAAAATAA

Upstream 100 bases:

>100_bases
ATATGGTCTCCTTGCTACTGGATGTATGGAAAATGGATCTTCCTCCCTTTTGGCTCACATAGAGAGTCTGATCACTTTAC
CATTCAACTAGGATATAGCT

Downstream 100 bases:

>100_bases
TTACTCTGCCCAAATAGCTGCGCGGAATAGTAGATCACTTTGAGGGAATTCAGCCTGGATTGTGCGATCTGATCAATCGC
TAAACCAATCAAAATCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
METRFNLPTHTVESFISTEQFSDIRKNKQECILQLSDGSYKISWHQNHPHVDSSDNGILTGIKNLFAYFFSGETCAGRLQ
NTLEIPGKAIFIPNPTIDMLELTCYENQIMMNKGKDMIPLIVNSKADVDKLEVARAQLLEILNKDLKDVDSHENRKKISA
LQNTKILEKSVLKNIRGDDKLYILGHGHVAGEYIGNERFDVNYLSHLYSCSQQSHTSPACKADIECSLEKDEYSTPEAVA
KSLKGFVPRDFSRFYTLTCHSGEARRPISLSDEDLKKAAQPDLEGDGKLAYAHRFFNALHSEGFTQPQVTGYIGAVCITP
NDNKHTCEVTLADGSLHDDIPRSDLKHVFSHEVHDVNKK

Sequences:

>Translated_359_residues
METRFNLPTHTVESFISTEQFSDIRKNKQECILQLSDGSYKISWHQNHPHVDSSDNGILTGIKNLFAYFFSGETCAGRLQ
NTLEIPGKAIFIPNPTIDMLELTCYENQIMMNKGKDMIPLIVNSKADVDKLEVARAQLLEILNKDLKDVDSHENRKKISA
LQNTKILEKSVLKNIRGDDKLYILGHGHVAGEYIGNERFDVNYLSHLYSCSQQSHTSPACKADIECSLEKDEYSTPEAVA
KSLKGFVPRDFSRFYTLTCHSGEARRPISLSDEDLKKAAQPDLEGDGKLAYAHRFFNALHSEGFTQPQVTGYIGAVCITP
NDNKHTCEVTLADGSLHDDIPRSDLKHVFSHEVHDVNKK
>Mature_359_residues
METRFNLPTHTVESFISTEQFSDIRKNKQECILQLSDGSYKISWHQNHPHVDSSDNGILTGIKNLFAYFFSGETCAGRLQ
NTLEIPGKAIFIPNPTIDMLELTCYENQIMMNKGKDMIPLIVNSKADVDKLEVARAQLLEILNKDLKDVDSHENRKKISA
LQNTKILEKSVLKNIRGDDKLYILGHGHVAGEYIGNERFDVNYLSHLYSCSQQSHTSPACKADIECSLEKDEYSTPEAVA
KSLKGFVPRDFSRFYTLTCHSGEARRPISLSDEDLKKAAQPDLEGDGKLAYAHRFFNALHSEGFTQPQVTGYIGAVCITP
NDNKHTCEVTLADGSLHDDIPRSDLKHVFSHEVHDVNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40400; Mature: 40400

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METRFNLPTHTVESFISTEQFSDIRKNKQECILQLSDGSYKISWHQNHPHVDSSDNGILT
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCEEEEECCCCCCCCCCCCCHHH
GIKNLFAYFFSGETCAGRLQNTLEIPGKAIFIPNPTIDMLELTCYENQIMMNKGKDMIPL
HHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCEEEECCCCCEEEE
IVNSKADVDKLEVARAQLLEILNKDLKDVDSHENRKKISALQNTKILEKSVLKNIRGDDK
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
LYILGHGHVAGEYIGNERFDVNYLSHLYSCSQQSHTSPACKADIECSLEKDEYSTPEAVA
EEEEECCCEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHH
KSLKGFVPRDFSRFYTLTCHSGEARRPISLSDEDLKKAAQPDLEGDGKLAYAHRFFNALH
HHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
SEGFTQPQVTGYIGAVCITPNDNKHTCEVTLADGSLHDDIPRSDLKHVFSHEVHDVNKK
HCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
METRFNLPTHTVESFISTEQFSDIRKNKQECILQLSDGSYKISWHQNHPHVDSSDNGILT
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEEECCCCEEEEECCCCCCCCCCCCCHHH
GIKNLFAYFFSGETCAGRLQNTLEIPGKAIFIPNPTIDMLELTCYENQIMMNKGKDMIPL
HHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEECCEEEECCCCCEEEE
IVNSKADVDKLEVARAQLLEILNKDLKDVDSHENRKKISALQNTKILEKSVLKNIRGDDK
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
LYILGHGHVAGEYIGNERFDVNYLSHLYSCSQQSHTSPACKADIECSLEKDEYSTPEAVA
EEEEECCCEEHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHH
KSLKGFVPRDFSRFYTLTCHSGEARRPISLSDEDLKKAAQPDLEGDGKLAYAHRFFNALH
HHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
SEGFTQPQVTGYIGAVCITPNDNKHTCEVTLADGSLHDDIPRSDLKHVFSHEVHDVNKK
HCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA