Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919425

Identifier: 238919425

GI number: 238919425

Start: 1484788

End: 1485519

Strand: Reverse

Name: 238919425

Synonym: NT01EI_1519

Alternate gene names: NA

Gene position: 1485519-1484788 (Counterclockwise)

Preceding gene: 238919426

Following gene: 238919421

Centisome position: 38.97

GC content: 53.69

Gene sequence:

>732_bases
GTGGTTAATGAGCCACAGCACATGGGCTTTAGCGCATGGCTCCAATCCTTTATTCATCGGCTGTTGGGCATCTTCGGTGA
AAAAATGTCTCCGGGGGAGTTAACGACGGGGTTGGACAAAATTTTTTCTGAGGATAAAGGGTGGGAGCATAAAGGATCTT
TCCAGGTCGGAGGAGCTGAGCGCACCGCTTTCAGGGTCAAAGTCTGTGGGGGGGATACCCATGTCGTTTGTGCCACCGCG
CATGATCTAAAAGAGTCTGGCACGACTGCGGCACAGTTGGCGGGTGGCCGATCCGTTTCCGACACCCTCAGAGATCTCAC
TGCAGCATATCCGACAGGTTCCGTGAAGGCCTTGATCCCTATCGCTCAGAGCAACCCCTATGGTCCATTTGGCCCGCGGG
GGCATTTTACCTTGCTGGAGGTGAACATCACTGACGGCGTTGCGCAAAGAGCCATCCTGCATGATTCTAAAGGGGGGTTT
GTGGATTATTTTTACGGTGGCGCAGAGCGTTTAACCGAGATCTTTCGGCAGGAAGGTCTGGCGCATGCTGGCTCTGATTT
TACTGTGGAGGTTGAGCACCGTGGGGAGCAGTCGCTGTTGAATGGTAAGGATTGTGGCCGTTTTGCATCCTACTACGCGG
CTCAGATTGCTCAGCATGGAAGCCTGCAAGAGGCCAGCAGAGAGGGGGCCGAGACCTTTTTTGCTGCCAATTTTGGTCAA
GGTAATCGATAG

Upstream 100 bases:

>100_bases
TATGCCACCCATCGCAGGTGTCTCACCAGGAGCGTGTGACTTTGTAGACTTTAACGAAGAAACTCCGCTCCTGACGTCCG
ATCATCAGAGGTTTGACAAC

Downstream 100 bases:

>100_bases
AGATGTGGCTGCCACTGGCCAGTCCAGCCGTATGGACTGGCAAGAGGGGGCGGTGCTGATCAGGGCCCTACGGCATCACC
GATGAGTGGTGTGTTGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MVNEPQHMGFSAWLQSFIHRLLGIFGEKMSPGELTTGLDKIFSEDKGWEHKGSFQVGGAERTAFRVKVCGGDTHVVCATA
HDLKESGTTAAQLAGGRSVSDTLRDLTAAYPTGSVKALIPIAQSNPYGPFGPRGHFTLLEVNITDGVAQRAILHDSKGGF
VDYFYGGAERLTEIFRQEGLAHAGSDFTVEVEHRGEQSLLNGKDCGRFASYYAAQIAQHGSLQEASREGAETFFAANFGQ
GNR

Sequences:

>Translated_243_residues
MVNEPQHMGFSAWLQSFIHRLLGIFGEKMSPGELTTGLDKIFSEDKGWEHKGSFQVGGAERTAFRVKVCGGDTHVVCATA
HDLKESGTTAAQLAGGRSVSDTLRDLTAAYPTGSVKALIPIAQSNPYGPFGPRGHFTLLEVNITDGVAQRAILHDSKGGF
VDYFYGGAERLTEIFRQEGLAHAGSDFTVEVEHRGEQSLLNGKDCGRFASYYAAQIAQHGSLQEASREGAETFFAANFGQ
GNR
>Mature_243_residues
MVNEPQHMGFSAWLQSFIHRLLGIFGEKMSPGELTTGLDKIFSEDKGWEHKGSFQVGGAERTAFRVKVCGGDTHVVCATA
HDLKESGTTAAQLAGGRSVSDTLRDLTAAYPTGSVKALIPIAQSNPYGPFGPRGHFTLLEVNITDGVAQRAILHDSKGGF
VDYFYGGAERLTEIFRQEGLAHAGSDFTVEVEHRGEQSLLNGKDCGRFASYYAAQIAQHGSLQEASREGAETFFAANFGQ
GNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26202; Mature: 26202

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNEPQHMGFSAWLQSFIHRLLGIFGEKMSPGELTTGLDKIFSEDKGWEHKGSFQVGGAE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCC
RTAFRVKVCGGDTHVVCATAHDLKESGTTAAQLAGGRSVSDTLRDLTAAYPTGSVKALIP
CEEEEEEEECCCCEEEEEEHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEE
IAQSNPYGPFGPRGHFTLLEVNITDGVAQRAILHDSKGGFVDYFYGGAERLTEIFRQEGL
EECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCC
AHAGSDFTVEVEHRGEQSLLNGKDCGRFASYYAAQIAQHGSLQEASREGAETFFAANFGQ
CCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCHHEEEEECCCC
GNR
CCC
>Mature Secondary Structure
MVNEPQHMGFSAWLQSFIHRLLGIFGEKMSPGELTTGLDKIFSEDKGWEHKGSFQVGGAE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCC
RTAFRVKVCGGDTHVVCATAHDLKESGTTAAQLAGGRSVSDTLRDLTAAYPTGSVKALIP
CEEEEEEEECCCCEEEEEEHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEE
IAQSNPYGPFGPRGHFTLLEVNITDGVAQRAILHDSKGGFVDYFYGGAERLTEIFRQEGL
EECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCC
AHAGSDFTVEVEHRGEQSLLNGKDCGRFASYYAAQIAQHGSLQEASREGAETFFAANFGQ
CCCCCCCEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCHHEEEEECCCC
GNR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA