Click here to switch to the map view.

The map label for this gene is insA [H]

Identifier: 238919422

GI number: 238919422

Start: 1483265

End: 1483483

Strand: Direct

Name: insA [H]

Synonym: NT01EI_1516

Alternate gene names: 238919422

Gene position: 1483265-1483483 (Clockwise)

Preceding gene: 238919417

Following gene: 238919423

Centisome position: 38.91

GC content: 49.32

Gene sequence:

>219_bases
ATGGTTAGAACCCTAAAGGCTCATGACCGGTTTCGCTGCCGTGGCTGCCACCGCGTCTTTCAGCTTACTTACGCCTATGG
AGTCCGTAAACCGGGTATTAAAGAGCAGATCACTGAAATGGCCTTCAAGGGTGCCGGGGTACGCGATACCGCCAGAACAC
TGAAAATTGGCATTAACACCGTTATTCGGACTTTAAAAAACGCGTGCCAAAACGAATAA

Upstream 100 bases:

>100_bases
AATTGGTTGAATCTGATGTATAATGCTGTCTTTTTAGGTGATTGCATGGCCAGCGTTAACGTTCATTGTCCCCGTGGTCG
GTCTGCTCAGGTTTATCGCC

Downstream 100 bases:

>100_bases
CGTCTTCACCCGTCGCCCATACTGATGTGGATCTTATCTGCGAACTCGATGAGCAATGGATCTTCGTGGGCAGTAAAGCC
TGGCGGAACTGGTTCTGGTA

Product: insertion element iso-IS1N protein InsA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MVRTLKAHDRFRCRGCHRVFQLTYAYGVRKPGIKEQITEMAFKGAGVRDTARTLKIGINTVIRTLKNACQNE

Sequences:

>Translated_72_residues
MVRTLKAHDRFRCRGCHRVFQLTYAYGVRKPGIKEQITEMAFKGAGVRDTARTLKIGINTVIRTLKNACQNE
>Mature_72_residues
MVRTLKAHDRFRCRGCHRVFQLTYAYGVRKPGIKEQITEMAFKGAGVRDTARTLKIGINTVIRTLKNACQNE

Specific function: Absolutely required for transposition of IS1 [H]

COG id: COG3677

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS1 elements insA family [H]

Homologues:

Organism=Escherichia coli, GI1789852, Length=66, Percent_Identity=37.8787878787879, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI1788204, Length=66, Percent_Identity=37.8787878787879, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI1786204, Length=66, Percent_Identity=37.8787878787879, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI87081814, Length=66, Percent_Identity=37.8787878787879, Blast_Score=64, Evalue=2e-12,
Organism=Escherichia coli, GI1786471, Length=66, Percent_Identity=37.8787878787879, Blast_Score=64, Evalue=2e-12,
Organism=Escherichia coli, GI1786460, Length=66, Percent_Identity=37.8787878787879, Blast_Score=64, Evalue=2e-12,
Organism=Escherichia coli, GI1790747, Length=66, Percent_Identity=37.8787878787879, Blast_Score=63, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003220 [H]

Pfam domain/function: PF03811 Ins_element1 [H]

EC number: NA

Molecular weight: Translated: 8239; Mature: 8239

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRTLKAHDRFRCRGCHRVFQLTYAYGVRKPGIKEQITEMAFKGAGVRDTARTLKIGINT
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VIRTLKNACQNE
HHHHHHHHHCCC
>Mature Secondary Structure
MVRTLKAHDRFRCRGCHRVFQLTYAYGVRKPGIKEQITEMAFKGAGVRDTARTLKIGINT
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VIRTLKNACQNE
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6265806 [H]