| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is dbpA [H]
Identifier: 238919400
GI number: 238919400
Start: 1465766
End: 1467139
Strand: Direct
Name: dbpA [H]
Synonym: NT01EI_1494
Alternate gene names: 238919400
Gene position: 1465766-1467139 (Clockwise)
Preceding gene: 238919390
Following gene: 238919401
Centisome position: 38.45
GC content: 63.76
Gene sequence:
>1374_bases GTGACCTCCTTTGCTGAACTTAATGCCCTTCCTGAAGAACAACTCAACAACCTCAATGAGCTGGGCTACCAGACCATGAC ACCGGTGCAGGCGGCGACGCTGCCGGCCATTCTGGCGGGAAAGGATGTCCGCGCGCAGGCGAAGACCGGCAGCGGTAAAA CGGCGGCGTTTGGTCTTGGCCTGCTGCAGCATATTGATGCCAGCCGGTTTATTACCCAGTCGCTGGTGCTGTGTCCGACC CGTGAGCTGGCCGATCAGGTGGCGGCCGCGCTGCGCAGGCTGGCGCGCTATATGCCGAATATCAAAGTGCTGACGCTGTG CGGCGGGGTGCCCTTCGGCGCACAGCGCGATTCACTGATCCATGCGCCGCACATCATTGTGGCAACGCCGGGAAGACTGC TTGATCACCTGAAAAAAGAGACCCTCAGCCTGGAGGCGCTGCAGACGCTTATCCTGGATGAGGCGGATCGGATGCTGGAC ATGGGCTTTGCCGATGCGCTGGACGAGGTGATTTCCTGGGCGCCGGAAAAGCGCCAGACGCTGCTGTTTTCTGCGACCTG GCCTGCGGAGATCGCCGCCATCAGCCGCCGGATTCAGCGCGATCCACTGACGATTGAGATCGATACCGACGGCGAGCTGC CCGCGGTGGAGCAGCGCTTCTACGAGGTCTCCCGCAGCGGCAAGACAGGGTTGCTGCAGGCGCTGTTAAGCCAGCATCAG CCGGCCTCCTGCGTGGTGTTCTGCAATACCAAGAAAGATTGCCAGGCGGTTTATGATGCGCTGGAGGAGAGCGGGCAGAG CGTGCTGGTGCTGCACGGCGATATGGAGCAGCGCGATCGCGATCAGACGCTGGTGCGTTTCGCCAACGGCAGCAGCCGGG TGCTGGTGGCGACCGATGTGGCGGCCCGGGGGCTGGATATTAAGGCTCTGGCGATGGTGATCAACTACGAGCTCTCCTGG GATCCGGAGGTTCACGTGCACCGTATTGGCCGCACCGCCCGCGCTGGGGCAAGCGGGCTGGCCATCAGCCTCTGCGCGCC GGAGGAGGCGCAGCGCGCCAACGCGCTGGAGGAGATGCTCGGCGTCAGACTCCAGTGGCAGCCTCAGCCGGACGGCGTTC GCATCGCCGCTCTGGAGGCGGCGATGGCGACCCTGTGCATCGACGGCGGTAAAAAAGCCAAAATGCGCCCGGGCGATATC CTGGGGGCGCTAACCGGCGAACTGGGGCTGGAGGGGGCGGATATCGGAAAAATCGACATCCACCCGACCCACGCGTACGT CGCCGTGCGCCGGGCAGTGGCCCGTCAGGCCTGGAAGCAGCTGCAGCAGGGGAAAATCAAAGGGAAGGCGGTGAAGGTCC GGCTGCTGAAGTGA
Upstream 100 bases:
>100_bases AAAATCCGCACGGCACCACCGGTATTGAATGGTATCATTATCCTCCGATGCCCCGGCAATAACGCCCGGACGGCCTTTTT TATCCGCTGAGACTATCACT
Downstream 100 bases:
>100_bases TCCCGTTCCGCTGATGCCGCAGTGGGTGACGCTGCGCCGCGTGTGGTATCCACGGCGGCAGCACGGGATTGTCAGGGGCC GCTGGTCGCCGCACCCCCAG
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MTSFAELNALPEEQLNNLNELGYQTMTPVQAATLPAILAGKDVRAQAKTGSGKTAAFGLGLLQHIDASRFITQSLVLCPT RELADQVAAALRRLARYMPNIKVLTLCGGVPFGAQRDSLIHAPHIIVATPGRLLDHLKKETLSLEALQTLILDEADRMLD MGFADALDEVISWAPEKRQTLLFSATWPAEIAAISRRIQRDPLTIEIDTDGELPAVEQRFYEVSRSGKTGLLQALLSQHQ PASCVVFCNTKKDCQAVYDALEESGQSVLVLHGDMEQRDRDQTLVRFANGSSRVLVATDVAARGLDIKALAMVINYELSW DPEVHVHRIGRTARAGASGLAISLCAPEEAQRANALEEMLGVRLQWQPQPDGVRIAALEAAMATLCIDGGKKAKMRPGDI LGALTGELGLEGADIGKIDIHPTHAYVAVRRAVARQAWKQLQQGKIKGKAVKVRLLK
Sequences:
>Translated_457_residues MTSFAELNALPEEQLNNLNELGYQTMTPVQAATLPAILAGKDVRAQAKTGSGKTAAFGLGLLQHIDASRFITQSLVLCPT RELADQVAAALRRLARYMPNIKVLTLCGGVPFGAQRDSLIHAPHIIVATPGRLLDHLKKETLSLEALQTLILDEADRMLD MGFADALDEVISWAPEKRQTLLFSATWPAEIAAISRRIQRDPLTIEIDTDGELPAVEQRFYEVSRSGKTGLLQALLSQHQ PASCVVFCNTKKDCQAVYDALEESGQSVLVLHGDMEQRDRDQTLVRFANGSSRVLVATDVAARGLDIKALAMVINYELSW DPEVHVHRIGRTARAGASGLAISLCAPEEAQRANALEEMLGVRLQWQPQPDGVRIAALEAAMATLCIDGGKKAKMRPGDI LGALTGELGLEGADIGKIDIHPTHAYVAVRRAVARQAWKQLQQGKIKGKAVKVRLLK >Mature_456_residues TSFAELNALPEEQLNNLNELGYQTMTPVQAATLPAILAGKDVRAQAKTGSGKTAAFGLGLLQHIDASRFITQSLVLCPTR ELADQVAAALRRLARYMPNIKVLTLCGGVPFGAQRDSLIHAPHIIVATPGRLLDHLKKETLSLEALQTLILDEADRMLDM GFADALDEVISWAPEKRQTLLFSATWPAEIAAISRRIQRDPLTIEIDTDGELPAVEQRFYEVSRSGKTGLLQALLSQHQP ASCVVFCNTKKDCQAVYDALEESGQSVLVLHGDMEQRDRDQTLVRFANGSSRVLVATDVAARGLDIKALAMVINYELSWD PEVHVHRIGRTARAGASGLAISLCAPEEAQRANALEEMLGVRLQWQPQPDGVRIAALEAAMATLCIDGGKKAKMRPGDIL GALTGELGLEGADIGKIDIHPTHAYVAVRRAVARQAWKQLQQGKIKGKAVKVRLLK
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=362, Percent_Identity=34.5303867403315, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI31542656, Length=374, Percent_Identity=37.7005347593583, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI164664518, Length=365, Percent_Identity=32.8767123287671, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI45446747, Length=363, Percent_Identity=36.6391184573003, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI45446743, Length=363, Percent_Identity=36.6391184573003, Blast_Score=230, Evalue=2e-60, Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=39.4957983193277, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=39.4957983193277, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=39.4957983193277, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI224593278, Length=355, Percent_Identity=38.8732394366197, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=39.4957983193277, Blast_Score=225, Evalue=8e-59, Organism=Homo sapiens, GI21071032, Length=359, Percent_Identity=35.6545961002786, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI50659095, Length=400, Percent_Identity=35.25, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI38327634, Length=359, Percent_Identity=36.7688022284123, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI41327773, Length=349, Percent_Identity=35.5300859598854, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI20149629, Length=355, Percent_Identity=33.8028169014084, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI4503529, Length=369, Percent_Identity=34.4173441734417, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=38.0434782608696, Blast_Score=208, Evalue=7e-54, Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=38.0434782608696, Blast_Score=208, Evalue=8e-54, Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=38.0434782608696, Blast_Score=208, Evalue=9e-54, Organism=Homo sapiens, GI4758112, Length=373, Percent_Identity=31.6353887399464, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI18375623, Length=373, Percent_Identity=31.6353887399464, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI41327771, Length=379, Percent_Identity=34.3007915567282, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI21040371, Length=365, Percent_Identity=30.958904109589, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI4758138, Length=372, Percent_Identity=34.1397849462366, Blast_Score=205, Evalue=8e-53, Organism=Homo sapiens, GI148613856, Length=361, Percent_Identity=33.7950138504155, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI38201710, Length=361, Percent_Identity=33.7950138504155, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI169881239, Length=368, Percent_Identity=36.9565217391304, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI13514809, Length=368, Percent_Identity=36.9565217391304, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI164419743, Length=340, Percent_Identity=37.0588235294118, Blast_Score=202, Evalue=5e-52, Organism=Homo sapiens, GI51094101, Length=340, Percent_Identity=37.0588235294118, Blast_Score=202, Evalue=6e-52, Organism=Homo sapiens, GI83700235, Length=369, Percent_Identity=33.8753387533875, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI13514831, Length=360, Percent_Identity=36.1111111111111, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI13129006, Length=376, Percent_Identity=32.9787234042553, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI41327779, Length=364, Percent_Identity=33.7912087912088, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI222352149, Length=357, Percent_Identity=33.0532212885154, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI188035877, Length=345, Percent_Identity=33.9130434782609, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI41327776, Length=354, Percent_Identity=31.3559322033898, Blast_Score=176, Evalue=6e-44, Organism=Homo sapiens, GI55749865, Length=355, Percent_Identity=29.2957746478873, Blast_Score=172, Evalue=8e-43, Organism=Homo sapiens, GI256223453, Length=386, Percent_Identity=29.7927461139896, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI164419732, Length=344, Percent_Identity=31.3953488372093, Blast_Score=169, Evalue=7e-42, Organism=Homo sapiens, GI8922886, Length=376, Percent_Identity=30.3191489361702, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI6005743, Length=378, Percent_Identity=29.8941798941799, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI9506931, Length=388, Percent_Identity=29.1237113402062, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI62241022, Length=358, Percent_Identity=29.8882681564246, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI62241024, Length=332, Percent_Identity=30.421686746988, Blast_Score=156, Evalue=4e-38, Organism=Homo sapiens, GI17505907, Length=414, Percent_Identity=29.4685990338164, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI38569503, Length=348, Percent_Identity=29.0229885057471, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI38569505, Length=348, Percent_Identity=29.0229885057471, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI4826686, Length=340, Percent_Identity=29.7058823529412, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI9966805, Length=307, Percent_Identity=34.2019543973941, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI256773275, Length=380, Percent_Identity=31.5789473684211, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI154759257, Length=400, Percent_Identity=27.5, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI20336298, Length=216, Percent_Identity=32.4074074074074, Blast_Score=101, Evalue=1e-21, Organism=Escherichia coli, GI1787605, Length=457, Percent_Identity=77.4617067833698, Blast_Score=734, Evalue=0.0, Organism=Escherichia coli, GI87082221, Length=349, Percent_Identity=43.8395415472779, Blast_Score=278, Evalue=6e-76, Organism=Escherichia coli, GI1787016, Length=367, Percent_Identity=40.5994550408719, Blast_Score=250, Evalue=1e-67, Organism=Escherichia coli, GI1790214, Length=363, Percent_Identity=37.1900826446281, Blast_Score=212, Evalue=4e-56, Organism=Escherichia coli, GI1788930, Length=335, Percent_Identity=39.7014925373134, Blast_Score=206, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17507121, Length=376, Percent_Identity=35.3723404255319, Blast_Score=248, Evalue=4e-66, Organism=Caenorhabditis elegans, GI71995724, Length=362, Percent_Identity=35.9116022099448, Blast_Score=248, Evalue=6e-66, Organism=Caenorhabditis elegans, GI71987143, Length=369, Percent_Identity=34.6883468834688, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17555296, Length=364, Percent_Identity=39.2857142857143, Blast_Score=235, Evalue=4e-62, Organism=Caenorhabditis elegans, GI17552114, Length=350, Percent_Identity=32.2857142857143, Blast_Score=217, Evalue=9e-57, Organism=Caenorhabditis elegans, GI115533224, Length=376, Percent_Identity=36.436170212766, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI71982858, Length=365, Percent_Identity=30.4109589041096, Blast_Score=212, Evalue=3e-55, Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=36.4829396325459, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI86570094, Length=357, Percent_Identity=35.8543417366947, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI71995514, Length=354, Percent_Identity=37.2881355932203, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17510309, Length=354, Percent_Identity=37.2881355932203, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17510307, Length=354, Percent_Identity=37.2881355932203, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI115532546, Length=358, Percent_Identity=35.195530726257, Blast_Score=206, Evalue=1e-53, Organism=Caenorhabditis elegans, GI115532548, Length=358, Percent_Identity=35.195530726257, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=34.9081364829396, Blast_Score=205, Evalue=3e-53, Organism=Caenorhabditis elegans, GI71999646, Length=347, Percent_Identity=37.1757925072046, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI71999644, Length=351, Percent_Identity=36.7521367521368, Blast_Score=204, Evalue=7e-53, Organism=Caenorhabditis elegans, GI17507945, Length=358, Percent_Identity=34.9162011173184, Blast_Score=197, Evalue=8e-51, Organism=Caenorhabditis elegans, GI17507877, Length=388, Percent_Identity=35.0515463917526, Blast_Score=195, Evalue=3e-50, Organism=Caenorhabditis elegans, GI71995718, Length=382, Percent_Identity=35.6020942408377, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17536099, Length=408, Percent_Identity=31.3725490196078, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17536101, Length=408, Percent_Identity=31.3725490196078, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=35.1351351351351, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=33.5135135135135, Blast_Score=191, Evalue=8e-49, Organism=Caenorhabditis elegans, GI17536103, Length=408, Percent_Identity=31.3725490196078, Blast_Score=188, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=34.453781512605, Blast_Score=187, Evalue=7e-48, Organism=Caenorhabditis elegans, GI17505370, Length=359, Percent_Identity=34.8189415041783, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=30.3867403314917, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17509811, Length=347, Percent_Identity=32.5648414985591, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17537549, Length=347, Percent_Identity=32.8530259365994, Blast_Score=168, Evalue=6e-42, Organism=Caenorhabditis elegans, GI193206561, Length=342, Percent_Identity=30.1169590643275, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI71990816, Length=377, Percent_Identity=30.5039787798408, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17507641, Length=401, Percent_Identity=31.4214463840399, Blast_Score=151, Evalue=7e-37, Organism=Caenorhabditis elegans, GI17556951, Length=356, Percent_Identity=29.7752808988764, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=32.2666666666667, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI25148203, Length=435, Percent_Identity=25.2873563218391, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI193208216, Length=374, Percent_Identity=30.2139037433155, Blast_Score=138, Evalue=5e-33, Organism=Caenorhabditis elegans, GI71982862, Length=194, Percent_Identity=32.9896907216495, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17508543, Length=352, Percent_Identity=28.9772727272727, Blast_Score=126, Evalue=2e-29, Organism=Caenorhabditis elegans, GI25148205, Length=358, Percent_Identity=24.0223463687151, Blast_Score=109, Evalue=4e-24, Organism=Caenorhabditis elegans, GI71997889, Length=400, Percent_Identity=27.25, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71987152, Length=109, Percent_Identity=38.5321100917431, Blast_Score=95, Evalue=8e-20, Organism=Caenorhabditis elegans, GI25148291, Length=107, Percent_Identity=40.1869158878505, Blast_Score=84, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6320224, Length=375, Percent_Identity=34.4, Blast_Score=236, Evalue=5e-63, Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=38.8732394366197, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6321856, Length=367, Percent_Identity=37.3297002724796, Blast_Score=226, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6321360, Length=354, Percent_Identity=38.9830508474576, Blast_Score=220, Evalue=4e-58, Organism=Saccharomyces cerevisiae, GI6323021, Length=349, Percent_Identity=36.676217765043, Blast_Score=215, Evalue=1e-56, Organism=Saccharomyces cerevisiae, GI6320041, Length=355, Percent_Identity=31.830985915493, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6320119, Length=357, Percent_Identity=31.6526610644258, Blast_Score=202, Evalue=8e-53, Organism=Saccharomyces cerevisiae, GI6323947, Length=357, Percent_Identity=35.0140056022409, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6322912, Length=361, Percent_Identity=33.2409972299169, Blast_Score=199, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6322323, Length=361, Percent_Identity=33.2409972299169, Blast_Score=199, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6324778, Length=366, Percent_Identity=35.2459016393443, Blast_Score=199, Evalue=9e-52, Organism=Saccharomyces cerevisiae, GI6325138, Length=379, Percent_Identity=34.8284960422164, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6322427, Length=354, Percent_Identity=35.0282485875706, Blast_Score=196, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6324620, Length=354, Percent_Identity=33.0508474576271, Blast_Score=196, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6321963, Length=353, Percent_Identity=36.2606232294618, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6321111, Length=352, Percent_Identity=32.3863636363636, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6320449, Length=379, Percent_Identity=31.6622691292876, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6319618, Length=411, Percent_Identity=30.1703163017032, Blast_Score=166, Evalue=9e-42, Organism=Saccharomyces cerevisiae, GI6319714, Length=363, Percent_Identity=28.9256198347107, Blast_Score=166, Evalue=9e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=417, Percent_Identity=28.537170263789, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6321267, Length=351, Percent_Identity=32.4786324786325, Blast_Score=146, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6323306, Length=402, Percent_Identity=27.363184079602, Blast_Score=139, Evalue=7e-34, Organism=Saccharomyces cerevisiae, GI6320173, Length=199, Percent_Identity=36.6834170854271, Blast_Score=134, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6322876, Length=409, Percent_Identity=28.1173594132029, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6324366, Length=349, Percent_Identity=26.647564469914, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI24645031, Length=368, Percent_Identity=35.3260869565217, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24584399, Length=371, Percent_Identity=37.7358490566038, Blast_Score=231, Evalue=6e-61, Organism=Drosophila melanogaster, GI24583281, Length=387, Percent_Identity=32.8165374677003, Blast_Score=221, Evalue=8e-58, Organism=Drosophila melanogaster, GI24583279, Length=387, Percent_Identity=32.8165374677003, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI21356161, Length=359, Percent_Identity=37.6044568245125, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI17136814, Length=362, Percent_Identity=37.292817679558, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI24642151, Length=356, Percent_Identity=36.2359550561798, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=36.2359550561798, Blast_Score=214, Evalue=7e-56, Organism=Drosophila melanogaster, GI24585582, Length=350, Percent_Identity=35.7142857142857, Blast_Score=214, Evalue=8e-56, Organism=Drosophila melanogaster, GI24582080, Length=368, Percent_Identity=34.2391304347826, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI24582078, Length=368, Percent_Identity=34.2391304347826, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI17136248, Length=368, Percent_Identity=34.2391304347826, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI24582075, Length=368, Percent_Identity=34.2391304347826, Blast_Score=213, Evalue=3e-55, Organism=Drosophila melanogaster, GI28575014, Length=342, Percent_Identity=35.672514619883, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI24644487, Length=377, Percent_Identity=34.4827586206897, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI45551833, Length=377, Percent_Identity=34.4827586206897, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI24644485, Length=377, Percent_Identity=34.4827586206897, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI24644483, Length=377, Percent_Identity=34.4827586206897, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI281361218, Length=377, Percent_Identity=34.4827586206897, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI24644481, Length=377, Percent_Identity=34.4827586206897, Blast_Score=208, Evalue=5e-54, Organism=Drosophila melanogaster, GI24644479, Length=377, Percent_Identity=34.4827586206897, Blast_Score=208, Evalue=7e-54, Organism=Drosophila melanogaster, GI28574962, Length=368, Percent_Identity=35.054347826087, Blast_Score=207, Evalue=1e-53, Organism=Drosophila melanogaster, GI24662330, Length=364, Percent_Identity=35.4395604395604, Blast_Score=205, Evalue=5e-53, Organism=Drosophila melanogaster, GI28571808, Length=358, Percent_Identity=34.9162011173184, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI28571809, Length=358, Percent_Identity=34.9162011173184, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI18857967, Length=379, Percent_Identity=34.0369393139842, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI24584994, Length=378, Percent_Identity=32.2751322751323, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24581954, Length=366, Percent_Identity=31.1475409836066, Blast_Score=197, Evalue=9e-51, Organism=Drosophila melanogaster, GI24581952, Length=366, Percent_Identity=31.1475409836066, Blast_Score=197, Evalue=9e-51, Organism=Drosophila melanogaster, GI24581956, Length=366, Percent_Identity=31.1475409836066, Blast_Score=197, Evalue=9e-51, Organism=Drosophila melanogaster, GI17985987, Length=387, Percent_Identity=35.6589147286822, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI21355075, Length=370, Percent_Identity=32.7027027027027, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI21355559, Length=365, Percent_Identity=34.2465753424658, Blast_Score=168, Evalue=6e-42, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=33.6538461538462, Blast_Score=166, Evalue=2e-41, Organism=Drosophila melanogaster, GI24642822, Length=401, Percent_Identity=29.426433915212, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI17647335, Length=396, Percent_Identity=27.2727272727273, Blast_Score=150, Evalue=3e-36, Organism=Drosophila melanogaster, GI24643725, Length=403, Percent_Identity=28.0397022332506, Blast_Score=144, Evalue=8e-35, Organism=Drosophila melanogaster, GI24666101, Length=361, Percent_Identity=30.1939058171745, Blast_Score=140, Evalue=3e-33, Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=29.0030211480363, Blast_Score=135, Evalue=5e-32, Organism=Drosophila melanogaster, GI19920478, Length=351, Percent_Identity=29.6296296296296, Blast_Score=126, Evalue=3e-29, Organism=Drosophila melanogaster, GI20130173, Length=323, Percent_Identity=31.5789473684211, Blast_Score=124, Evalue=2e-28, Organism=Drosophila melanogaster, GI18859659, Length=211, Percent_Identity=32.2274881516588, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI28571338, Length=211, Percent_Identity=32.2274881516588, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24640164, Length=338, Percent_Identity=24.2603550295858, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI17136666, Length=219, Percent_Identity=27.8538812785388, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49656; Mature: 49525
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSFAELNALPEEQLNNLNELGYQTMTPVQAATLPAILAGKDVRAQAKTGSGKTAAFGLG CCCCHHHCCCCHHHHCCHHHCCCCCCCCHHHHHCCHHHCCCCCEEECCCCCCCHHHHHHH LLQHIDASRFITQSLVLCPTRELADQVAAALRRLARYMPNIKVLTLCGGVPFGAQRDSLI HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEE HAPHIIVATPGRLLDHLKKETLSLEALQTLILDEADRMLDMGFADALDEVISWAPEKRQT ECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCE LLFSATWPAEIAAISRRIQRDPLTIEIDTDGELPAVEQRFYEVSRSGKTGLLQALLSQHQ EEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC PASCVVFCNTKKDCQAVYDALEESGQSVLVLHGDMEQRDRDQTLVRFANGSSRVLVATDV CCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHEEEEECCCCEEEEEECH AARGLDIKALAMVINYELSWDPEVHVHRIGRTARAGASGLAISLCAPEEAQRANALEEML HHCCCCHHEEEEEEEEEECCCCCCHHEECCCHHCCCCCCCEEEEECCHHHHHHHHHHHHH GVRLQWQPQPDGVRIAALEAAMATLCIDGGKKAKMRPGDILGALTGELGLEGADIGKIDI CCEEEECCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEE HPTHAYVAVRRAVARQAWKQLQQGKIKGKAVKVRLLK CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC >Mature Secondary Structure TSFAELNALPEEQLNNLNELGYQTMTPVQAATLPAILAGKDVRAQAKTGSGKTAAFGLG CCCHHHCCCCHHHHCCHHHCCCCCCCCHHHHHCCHHHCCCCCEEECCCCCCCHHHHHHH LLQHIDASRFITQSLVLCPTRELADQVAAALRRLARYMPNIKVLTLCGGVPFGAQRDSLI HHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEE HAPHIIVATPGRLLDHLKKETLSLEALQTLILDEADRMLDMGFADALDEVISWAPEKRQT ECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCE LLFSATWPAEIAAISRRIQRDPLTIEIDTDGELPAVEQRFYEVSRSGKTGLLQALLSQHQ EEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCC PASCVVFCNTKKDCQAVYDALEESGQSVLVLHGDMEQRDRDQTLVRFANGSSRVLVATDV CCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHEEEEECCCCEEEEEECH AARGLDIKALAMVINYELSWDPEVHVHRIGRTARAGASGLAISLCAPEEAQRANALEEML HHCCCCHHEEEEEEEEEECCCCCCHHEECCCHHCCCCCCCEEEEECCHHHHHHHHHHHHH GVRLQWQPQPDGVRIAALEAAMATLCIDGGKKAKMRPGDILGALTGELGLEGADIGKIDI CCEEEECCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEE HPTHAYVAVRRAVARQAWKQLQQGKIKGKAVKVRLLK CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]