| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yaiL [H]
Identifier: 238919398
GI number: 238919398
Start: 1464951
End: 1465445
Strand: Reverse
Name: yaiL [H]
Synonym: NT01EI_1492
Alternate gene names: 238919398
Gene position: 1465445-1464951 (Counterclockwise)
Preceding gene: 238919399
Following gene: 238919397
Centisome position: 38.44
GC content: 53.94
Gene sequence:
>495_bases GTGACCCATAAGAAGATGGCCAAAGTCCAGAGAACGGCCAAGAAATCACGGGTTCAGGCCCGCGAGGCCCGCGAGGCCGT AGAGGAAAAAAAGCAGGCACAGCTTGAGCGGGATAAGCAGCTGAGTGAACAGCAGAAGCAGGCGACCATCGCCAAAGAGA TCAAAGCCCAGGTTAAGCAGCTGATTGAAATGAACCGAATCAGCCTGAAAAGAGGCGATATCGATTTTAACTTTACAGAT GGCAGCGTCATCAAAAAAATCACGGTGGATAAGCTGACACAAAACCAGTTGGTCAGCGGCCGCCTCGCCATTGCCCGTCT GGCCGTTGATAACGGTGGTCACGGTGAGTACGCCATCATCCCGGCCAGCGTTGCCGATAAAATCGCGCAGCGGGATGCCG GGAGCATTGTCCTGAACAGCACCCTGAGTCAGGAGGCGCAGGATGAGGATGATCCGTACGCCGACTTTAAGGTCCCTGAT GATTTGATGTGGTAA
Upstream 100 bases:
>100_bases CCCTGAAAATTACGGGTATACTCTCCCGGATAACCTGACTGAGCCAGAAACCAAGATGACAAAACTTACCTTACAAGAGC AGATGCTAAAAGCGGGACTT
Downstream 100 bases:
>100_bases GCCGGACGGGGCATAACGGCTCCCGGAACAGTTCATTGTCATTCTGACAGTGGCGCTTTGGGAGTCCATATGCTGTATGC AGCATTCCTGTATCATGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTHKKMAKVQRTAKKSRVQAREAREAVEEKKQAQLERDKQLSEQQKQATIAKEIKAQVKQLIEMNRISLKRGDIDFNFTD GSVIKKITVDKLTQNQLVSGRLAIARLAVDNGGHGEYAIIPASVADKIAQRDAGSIVLNSTLSQEAQDEDDPYADFKVPD DLMW
Sequences:
>Translated_164_residues MTHKKMAKVQRTAKKSRVQAREAREAVEEKKQAQLERDKQLSEQQKQATIAKEIKAQVKQLIEMNRISLKRGDIDFNFTD GSVIKKITVDKLTQNQLVSGRLAIARLAVDNGGHGEYAIIPASVADKIAQRDAGSIVLNSTLSQEAQDEDDPYADFKVPD DLMW >Mature_163_residues THKKMAKVQRTAKKSRVQAREAREAVEEKKQAQLERDKQLSEQQKQATIAKEIKAQVKQLIEMNRISLKRGDIDFNFTDG SVIKKITVDKLTQNQLVSGRLAIARLAVDNGGHGEYAIIPASVADKIAQRDAGSIVLNSTLSQEAQDEDDPYADFKVPDD LMW
Specific function: Unknown
COG id: COG3122
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081724, Length=164, Percent_Identity=81.7073170731707, Blast_Score=269, Evalue=8e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018636 [H]
Pfam domain/function: PF09831 DUF2058 [H]
EC number: NA
Molecular weight: Translated: 18390; Mature: 18259
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHKKMAKVQRTAKKSRVQAREAREAVEEKKQAQLERDKQLSEQQKQATIAKEIKAQVKQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIEMNRISLKRGDIDFNFTDGSVIKKITVDKLTQNQLVSGRLAIARLAVDNGGHGEYAII HHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEE PASVADKIAQRDAGSIVLNSTLSQEAQDEDDPYADFKVPDDLMW CHHHHHHHHHCCCCCEEECCHHHHHCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure THKKMAKVQRTAKKSRVQAREAREAVEEKKQAQLERDKQLSEQQKQATIAKEIKAQVKQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIEMNRISLKRGDIDFNFTDGSVIKKITVDKLTQNQLVSGRLAIARLAVDNGGHGEYAII HHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEE PASVADKIAQRDAGSIVLNSTLSQEAQDEDDPYADFKVPDDLMW CHHHHHHHHHCCCCCEEECCHHHHHCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]