Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919391

Identifier: 238919391

GI number: 238919391

Start: 1460175

End: 1461050

Strand: Reverse

Name: 238919391

Synonym: NT01EI_1485

Alternate gene names: NA

Gene position: 1461050-1460175 (Counterclockwise)

Preceding gene: 238919392

Following gene: 238919389

Centisome position: 38.32

GC content: 50.0

Gene sequence:

>876_bases
TTGGGATCGAAGCGTCCGTCCACCGGGGCATTTTACTGGCAGCGTGAGTTTGAGAAACTGGGGCACAAAGTAAAGGTCAT
CAGTCCTCAGTATGTAAAACCCTTTGTCCGCGGGCAAAAAAATGATGGTAATGATGCACAGGCCATCGCAGTGGCTCTGA
TGCAACCGACAATGCAGTTCGTGCCGCCAAAAAGCCCCGAACAGCAGGATATCCAGGCTTTACACCGGGCAAGGCAGCGT
ATTGTCAATCACCGCACTGCTACAGTCTGTCAAATAAGAGGGCTGTTACTTGACCGGGGGATCCCCATTGGCAGTGCTGT
CTCCAGAGCTCGCCGGACTATTCCTCTTATCCTTGAAGATGCAGAAAACGGTCTACGTTCCCGTATGCGCAGAACAATTG
CCGAGCTCTATGATCTCTTTAACGATCTCGAGCGTCGGATCCATTTTTTTGATAAGGAAATTGAAACAGTATTCAGGCAA
TCAGAAGCCTGTCAGCGTATCGCCAGAGTTAAAGGCATTGGCCCTAAAACGGCCACGGCCGTTGTTGCTGCTATTGGCAA
AGGAACTGAATTTAAGAATGGCCGCCACTTTGCTGCATGGCTGGGTCTGGTTCCACGCCAGCATTCGAGTGGCGACAGGC
AGGTGCTGATGAATATGACGAAAAAAGGCGACAAGCATCTGCGGACTCTTTTTATTCATGGTGCCCGCGCTGTCGTCAGG
GTTGCCACGAATAACAATGATGGTCATATGAATCAGTGGGTTAATCAGTTAAAGGAACGGCGCGGATTTAATAAAACGAC
CGTGGCGGTCGCTAACAAAAACGCGCGAATAATCTGGTCGATGCTGAGAAATGAGACCGAGTATCAGGTAGTGTGA

Upstream 100 bases:

>100_bases
GCTTGCGCTTTGTTGAACGGTTTTGTTAGCGGCTCTTATACGAAACGAACTGGCCGAAAAGAATTGCTCCAGACGCTGGC
AAATATTCCTGCATGTCTGA

Downstream 100 bases:

>100_bases
AATTAATCCCCTGCCAGAAAAAGTTGCAGCGTACTGAGAAATGGTGACAGGTTACACCTGCACAATCGGAACCTGATTTT
TATACTGGCCTCAGAGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MGSKRPSTGAFYWQREFEKLGHKVKVISPQYVKPFVRGQKNDGNDAQAIAVALMQPTMQFVPPKSPEQQDIQALHRARQR
IVNHRTATVCQIRGLLLDRGIPIGSAVSRARRTIPLILEDAENGLRSRMRRTIAELYDLFNDLERRIHFFDKEIETVFRQ
SEACQRIARVKGIGPKTATAVVAAIGKGTEFKNGRHFAAWLGLVPRQHSSGDRQVLMNMTKKGDKHLRTLFIHGARAVVR
VATNNNDGHMNQWVNQLKERRGFNKTTVAVANKNARIIWSMLRNETEYQVV

Sequences:

>Translated_291_residues
MGSKRPSTGAFYWQREFEKLGHKVKVISPQYVKPFVRGQKNDGNDAQAIAVALMQPTMQFVPPKSPEQQDIQALHRARQR
IVNHRTATVCQIRGLLLDRGIPIGSAVSRARRTIPLILEDAENGLRSRMRRTIAELYDLFNDLERRIHFFDKEIETVFRQ
SEACQRIARVKGIGPKTATAVVAAIGKGTEFKNGRHFAAWLGLVPRQHSSGDRQVLMNMTKKGDKHLRTLFIHGARAVVR
VATNNNDGHMNQWVNQLKERRGFNKTTVAVANKNARIIWSMLRNETEYQVV
>Mature_290_residues
GSKRPSTGAFYWQREFEKLGHKVKVISPQYVKPFVRGQKNDGNDAQAIAVALMQPTMQFVPPKSPEQQDIQALHRARQRI
VNHRTATVCQIRGLLLDRGIPIGSAVSRARRTIPLILEDAENGLRSRMRRTIAELYDLFNDLERRIHFFDKEIETVFRQS
EACQRIARVKGIGPKTATAVVAAIGKGTEFKNGRHFAAWLGLVPRQHSSGDRQVLMNMTKKGDKHLRTLFIHGARAVVRV
ATNNNDGHMNQWVNQLKERRGFNKTTVAVANKNARIIWSMLRNETEYQVV

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 33127; Mature: 32996

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSKRPSTGAFYWQREFEKLGHKVKVISPQYVKPFVRGQKNDGNDAQAIAVALMQPTMQF
CCCCCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VPPKSPEQQDIQALHRARQRIVNHRTATVCQIRGLLLDRGIPIGSAVSRARRTIPLILED
CCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEHH
AENGLRSRMRRTIAELYDLFNDLERRIHFFDKEIETVFRQSEACQRIARVKGIGPKTATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VVAAIGKGTEFKNGRHFAAWLGLVPRQHSSGDRQVLMNMTKKGDKHLRTLFIHGARAVVR
HHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHEECCCEEEE
VATNNNDGHMNQWVNQLKERRGFNKTTVAVANKNARIIWSMLRNETEYQVV
EEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
GSKRPSTGAFYWQREFEKLGHKVKVISPQYVKPFVRGQKNDGNDAQAIAVALMQPTMQF
CCCCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
VPPKSPEQQDIQALHRARQRIVNHRTATVCQIRGLLLDRGIPIGSAVSRARRTIPLILED
CCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEHH
AENGLRSRMRRTIAELYDLFNDLERRIHFFDKEIETVFRQSEACQRIARVKGIGPKTATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
VVAAIGKGTEFKNGRHFAAWLGLVPRQHSSGDRQVLMNMTKKGDKHLRTLFIHGARAVVR
HHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHEECCCEEEE
VATNNNDGHMNQWVNQLKERRGFNKTTVAVANKNARIIWSMLRNETEYQVV
EEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]