| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yceK [C]
Identifier: 238919378
GI number: 238919378
Start: 1445019
End: 1445324
Strand: Direct
Name: yceK [C]
Synonym: NT01EI_1472
Alternate gene names: 238919378
Gene position: 1445019-1445324 (Clockwise)
Preceding gene: 238919377
Following gene: 238919381
Centisome position: 37.9
GC content: 63.73
Gene sequence:
>306_bases ATGAAACAGCGACCGTTAACGATGGCCGTGGTACTGCTGGGGGCGGCGATGCTGGCGGGATGCGGCAGTATTATGGGGCG CACCACCATGCAGGAGGGGCACACCTATTACGCCGGGGTGCGTAACGATATGGCGCGGGTAAGCGGCAGCGGCAGCTACG ACTACGATTTTATGACCCGCGGCCGGGCATTTATCGATCTGCCGTTTTCGCTGCTGGCTGATACGCTGTACGCGCCGGTG GACTATTTCCACGGCCCCTATCGCGGCCAGCCGGATAGCCCGGATGCCCCGGTGCCGCCGCGCTGA
Upstream 100 bases:
>100_bases AGCCGTTGCAAAAAAATTTAGCGACAGAGCGGCGTCCGGTATCCTGTGGCGGGGATCCCGATTATTATCGGCTCAGGATA GATTCTTCAGGGAGATATTG
Downstream 100 bases:
>100_bases GGGGATACGGTTCAGCCATTGAAGCAAAGCCATCGCTGTGCGATGGCTTTTGGGTTATCAGGCCGGCTGCACCGTGCGAC AGAGGCGGCTGACGCAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MKQRPLTMAVVLLGAAMLAGCGSIMGRTTMQEGHTYYAGVRNDMARVSGSGSYDYDFMTRGRAFIDLPFSLLADTLYAPV DYFHGPYRGQPDSPDAPVPPR
Sequences:
>Translated_101_residues MKQRPLTMAVVLLGAAMLAGCGSIMGRTTMQEGHTYYAGVRNDMARVSGSGSYDYDFMTRGRAFIDLPFSLLADTLYAPV DYFHGPYRGQPDSPDAPVPPR >Mature_101_residues MKQRPLTMAVVLLGAAMLAGCGSIMGRTTMQEGHTYYAGVRNDMARVSGSGSYDYDFMTRGRAFIDLPFSLLADTLYAPV DYFHGPYRGQPDSPDAPVPPR
Specific function: Unknown
COG id: COG5645
COG function: function code R; Predicted periplasmic lipoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787288, Length=83, Percent_Identity=40.9638554216867, Blast_Score=59, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11039; Mature: 11039
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRPLTMAVVLLGAAMLAGCGSIMGRTTMQEGHTYYAGVRNDMARVSGSGSYDYDFMTR CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCHHHHHHHHCCCCCCCCHHHCC GRAFIDLPFSLLADTLYAPVDYFHGPYRGQPDSPDAPVPPR CCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQRPLTMAVVLLGAAMLAGCGSIMGRTTMQEGHTYYAGVRNDMARVSGSGSYDYDFMTR CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCEEECCHHHHHHHHCCCCCCCCHHHCC GRAFIDLPFSLLADTLYAPVDYFHGPYRGQPDSPDAPVPPR CCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA