| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919363
Identifier: 238919363
GI number: 238919363
Start: 1432995
End: 1433207
Strand: Reverse
Name: 238919363
Synonym: NT01EI_1456
Alternate gene names: NA
Gene position: 1433207-1432995 (Counterclockwise)
Preceding gene: 238919366
Following gene: 238919355
Centisome position: 37.59
GC content: 59.62
Gene sequence:
>213_bases GTGGTCGTTCATTGGCGCCATCGGCGTCGGAGTCGGAATCAAGGGTGTTACCGCCGGTTGGCCGCTGGCGGCCCCGATAC GCTGCCACTGCTCCGGAACCGTCGGCTGACTCATATCAATAGCGTCGCCACCCTCTGCATCCTCGCGTTCAATCCGATCC TGGGTGGCTTTAGAGCCGCTAACAAAACCGCTCAACAAAGCGCAAGCAGATAA
Upstream 100 bases:
>100_bases CAGCCAACAGTTCATCCGCTTCATCAAAGAACGTTTGATAAAACGCACTCATATCCATGCTCACAGGTCACCTCTTATCT ATCGCGCTCGGAATTTTGAC
Downstream 100 bases:
>100_bases CAGCACAAGCCAGCGTCAGCAATGCAAGATGGGTATCCAGCCGCCGTTCGAAACGAATACCCAGCTTGCCAAAACCCGCT AACCACCCATGAGTTCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MVVHWRHRRRSRNQGCYRRLAAGGPDTLPLLRNRRLTHINSVATLCILAFNPILGGFRAANKTAQQSASR
Sequences:
>Translated_70_residues MVVHWRHRRRSRNQGCYRRLAAGGPDTLPLLRNRRLTHINSVATLCILAFNPILGGFRAANKTAQQSASR >Mature_70_residues MVVHWRHRRRSRNQGCYRRLAAGGPDTLPLLRNRRLTHINSVATLCILAFNPILGGFRAANKTAQQSASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7923; Mature: 7923
Theoretical pI: Translated: 12.65; Mature: 12.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVHWRHRRRSRNQGCYRRLAAGGPDTLPLLRNRRLTHINSVATLCILAFNPILGGFRAA CCCCCCHHHCCCCHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH NKTAQQSASR CHHHHHCCCC >Mature Secondary Structure MVVHWRHRRRSRNQGCYRRLAAGGPDTLPLLRNRRLTHINSVATLCILAFNPILGGFRAA CCCCCCHHHCCCCHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH NKTAQQSASR CHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA